RNA–Protein interactions for RNA: ENST00000502612.5

NEDD4-203, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 3

Gene NEDD4, Length 652 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-203ENST00000502612 SPATC1Q76KD6 591 aa9.42□□□□□ -0.9
NEDD4-203ENST00000502612 FAM214BQ7L5A3 538 aa9.42□□□□□ -0.9
NEDD4-203ENST00000502612 DHRS1Q96LJ7 313 aa9.42□□□□□ -0.9
NEDD4-203ENST00000502612 DNAJC7Q99615 494 aa9.42□□□□□ -0.9
NEDD4-203ENST00000502612 SUSD2Q9UGT4 822 aa9.42□□□□□ -0.9
NEDD4-203ENST00000502612 U3KQE9 123 aa9.42□□□□□ -0.9
NEDD4-203ENST00000502612 CBFA2T2O43439 604 aa9.41□□□□□ -0.9
NEDD4-203ENST00000502612 SUSD5O60279 629 aa9.41□□□□□ -0.9
NEDD4-203ENST00000502612 NCAPHQ15003 741 aa9.41□□□□□ -0.9
NEDD4-203ENST00000502612 ZNF765Q7L2R6 523 aa9.41□□□□□ -0.9
NEDD4-203ENST00000502612 CCDC144CPQ8IYA2 1237 aa9.41□□□□□ -0.9
NEDD4-203ENST00000502612 TMEM151AQ8N4L1 468 aa9.41□□□□□ -0.9
NEDD4-203ENST00000502612 HEXIM2Q96MH2 286 aaKnown RBP9.41□□□□□ -0.9
NEDD4-203ENST00000502612 KANSL2Q9H9L4 492 aa9.41□□□□□ -0.9
NEDD4-203ENST00000502612 PFDN2Q9UHV9 154 aa9.41□□□□□ -0.9
NEDD4-203ENST00000502612 TBX22Q9Y458 520 aa9.41□□□□□ -0.9
NEDD4-203ENST00000502612 MRPL42Q9Y6G3 142 aaKnown RBP9.41□□□□□ -0.9
NEDD4-203ENST00000502612 PRR33A8MZF0 331 aa9.4□□□□□ -0.9
NEDD4-203ENST00000502612 SHOXO15266 292 aa9.4□□□□□ -0.9
NEDD4-203ENST00000502612 DIAPH1O60610 1272 aaKnown RBP9.4□□□□□ -0.9
NEDD4-203ENST00000502612 F13BP05160 661 aa9.4□□□□□ -0.9
NEDD4-203ENST00000502612 EPHX1P07099 455 aa9.4□□□□□ -0.9
NEDD4-203ENST00000502612 ETV3P41162 512 aa9.4□□□□□ -0.9
NEDD4-203ENST00000502612 CHMP4BP1P59074 171 aa9.4□□□□□ -0.9
NEDD4-203ENST00000502612 SNW1Q13573 536 aaKnown RBP9.4□□□□□ -0.9
NEDD4-203ENST00000502612 MTERF2Q49AM1 385 aa9.4□□□□□ -0.9
NEDD4-203ENST00000502612 NLGN1Q8N2Q7 840 aa9.4□□□□□ -0.9
NEDD4-203ENST00000502612 LILRB2Q8N423 598 aa9.4□□□□□ -0.9
NEDD4-203ENST00000502612 RNF141Q8WVD5 230 aa9.4□□□□□ -0.9
NEDD4-203ENST00000502612 FGD4Q96M96 766 aa9.4□□□□□ -0.9
NEDD4-203ENST00000502612 HAUS7Q99871 368 aa9.4□□□□□ -0.9
NEDD4-203ENST00000502612 LGR4Q9BXB1 951 aa9.4□□□□□ -0.9
NEDD4-203ENST00000502612 SLC10A6Q3KNW5 377 aa9.39□□□□□ -0.91
NEDD4-203ENST00000502612 BBS9Q3SYG4 887 aa9.39□□□□□ -0.91
NEDD4-203ENST00000502612 OGFOD3Q6PK18 319 aa9.39□□□□□ -0.91
NEDD4-203ENST00000502612 LRP10Q7Z4F1 713 aa9.39□□□□□ -0.91
NEDD4-203ENST00000502612 Q96M66 194 aa9.39□□□□□ -0.91
NEDD4-203ENST00000502612 ZNF451Q9Y4E5 1061 aa9.39□□□□□ -0.91
NEDD4-203ENST00000502612 CBX7O95931 251 aa9.38□□□□□ -0.91
NEDD4-203ENST00000502612 PROCP04070 461 aa9.38□□□□□ -0.91
NEDD4-203ENST00000502612 IFRD2Q12894 506 aaPredicted RBP9.38□□□□□ -0.91
NEDD4-203ENST00000502612 RNF43Q68DV7 783 aa9.38□□□□□ -0.91
NEDD4-203ENST00000502612 EEPD1Q7L9B9 569 aa9.38□□□□□ -0.91
NEDD4-203ENST00000502612 KLHL25Q9H0H3 589 aa9.38□□□□□ -0.91
NEDD4-203ENST00000502612 PRDM5Q9NQX1 630 aaPredicted RBP9.38□□□□□ -0.91
NEDD4-203ENST00000502612 APEX2Q9UBZ4 518 aa9.38□□□□□ -0.91
NEDD4-203ENST00000502612 TLDC2A0PJX2 215 aa9.37□□□□□ -0.91
NEDD4-203ENST00000502612 RNF4P78317 190 aa9.37□□□□□ -0.91
NEDD4-203ENST00000502612 AUHQ13825 339 aaKnown RBP9.37□□□□□ -0.91
NEDD4-203ENST00000502612 HEATR6Q6AI08 1181 aaKnown RBP9.37□□□□□ -0.91
NEDD4-203ENST00000502612 SMARCC1Q92922 1105 aaPredicted RBP9.37□□□□□ -0.91
NEDD4-203ENST00000502612 RNPC3Q96LT9 517 aaKnown RBP9.37□□□□□ -0.91
NEDD4-203ENST00000502612 ASPNQ9BXN1 380 aa9.37□□□□□ -0.91
NEDD4-203ENST00000502612 ZMYM5Q9UJ78 669 aa9.37□□□□□ -0.91
NEDD4-203ENST00000502612 NFIAQ12857 509 aa9.36□□□□□ -0.91
NEDD4-203ENST00000502612 NBPF9Q3BBW0 867 aa9.36□□□□□ -0.91
NEDD4-203ENST00000502612 SFRP5Q5T4F7 317 aa9.36□□□□□ -0.91
NEDD4-203ENST00000502612 ZNF513Q8N8E2 541 aaPredicted RBP9.36□□□□□ -0.91
NEDD4-203ENST00000502612 FAM181AQ8N9Y4 354 aa9.36□□□□□ -0.91
NEDD4-203ENST00000502612 ST13P5Q8NFI4 369 aaPredicted RBP9.36□□□□□ -0.91
NEDD4-203ENST00000502612 GIMAP7Q8NHV1 300 aa9.36□□□□□ -0.91
NEDD4-203ENST00000502612 FBXL18Q96ME1 805 aa9.36□□□□□ -0.91
NEDD4-203ENST00000502612 MINPP1Q9UNW1 487 aa9.36□□□□□ -0.91
NEDD4-203ENST00000502612 TMA7Q9Y2S6 64 aaKnown RBP9.36□□□□□ -0.91
NEDD4-203ENST00000502612 WDR64B1ANS9 1081 aa9.35□□□□□ -0.91
NEDD4-203ENST00000502612 RSPO4Q2I0M5 234 aaPredicted RBP9.35□□□□□ -0.91
NEDD4-203ENST00000502612 C7orf61Q8IZ16 206 aa9.35□□□□□ -0.91
NEDD4-203ENST00000502612 FAM177A1Q8N128 213 aaPredicted RBP9.35□□□□□ -0.91
NEDD4-203ENST00000502612 DTWD2Q8NBA8 298 aa9.35□□□□□ -0.91
NEDD4-203ENST00000502612 ADCY4Q8NFM4 1077 aa9.35□□□□□ -0.91
NEDD4-203ENST00000502612 SHKBP1Q8TBC3 707 aa9.35□□□□□ -0.91
NEDD4-203ENST00000502612 SH3TC2Q8TF17 1288 aa9.35□□□□□ -0.91
NEDD4-203ENST00000502612 SPOCK3Q9BQ16 436 aa9.35□□□□□ -0.91
NEDD4-203ENST00000502612 PRDM14Q9GZV8 571 aa9.35□□□□□ -0.91
NEDD4-203ENST00000502612 GP6Q9HCN6 339 aa9.35□□□□□ -0.91
NEDD4-203ENST00000502612 KDM2BQ8NHM5 1336 aa9.34□□□□□ -0.91
NEDD4-203ENST00000502612 ANKRD34BA5PLL1 514 aa9.34□□□□□ -0.91
NEDD4-203ENST00000502612 FSTP19883 344 aa9.34□□□□□ -0.91
NEDD4-203ENST00000502612 CD247P20963 164 aa9.34□□□□□ -0.91
NEDD4-203ENST00000502612 SSRP1Q08945 709 aaKnown RBP9.34□□□□□ -0.91
NEDD4-203ENST00000502612 SV2CQ496J9 727 aa9.34□□□□□ -0.91
NEDD4-203ENST00000502612 NKAPLQ5M9Q1 402 aa9.34□□□□□ -0.91
NEDD4-203ENST00000502612 TMC3Q7Z5M5 1100 aa9.34□□□□□ -0.91
NEDD4-203ENST00000502612 DBNDD2Q9BQY9 259 aa9.34□□□□□ -0.91
NEDD4-203ENST00000502612 FBXL21Q9UKT6 434 aa9.34□□□□□ -0.91
NEDD4-203ENST00000502612 CYP7A1P22680 504 aa9.33□□□□□ -0.92
NEDD4-203ENST00000502612 TNK2Q07912 1038 aa9.33□□□□□ -0.92
NEDD4-203ENST00000502612 SDE2Q6IQ49 451 aa9.33□□□□□ -0.92
NEDD4-203ENST00000502612 ADAT2Q7Z6V5 191 aaKnown RBP9.33□□□□□ -0.92
NEDD4-203ENST00000502612 BRF1Q92994 677 aa9.33□□□□□ -0.92
NEDD4-203ENST00000502612 PPP1R14AQ96A00 147 aa9.33□□□□□ -0.92
NEDD4-203ENST00000502612 GFOD1Q9NXC2 390 aa9.33□□□□□ -0.92
NEDD4-203ENST00000502612 PCDHB12Q9Y5F1 795 aa9.33□□□□□ -0.92
NEDD4-203ENST00000502612 CAPN6Q9Y6Q1 641 aa9.33□□□□□ -0.92
NEDD4-203ENST00000502612 SHISA3A0PJX4 238 aa9.32□□□□□ -0.92
NEDD4-203ENST00000502612 TBX1O43435 398 aa9.32□□□□□ -0.92
NEDD4-203ENST00000502612 IGLV1-40P01703 118 aa9.32□□□□□ -0.92
NEDD4-203ENST00000502612 ITIH2P19823 946 aa9.32□□□□□ -0.92
NEDD4-203ENST00000502612 CYP27C1Q4G0S4 372 aa9.32□□□□□ -0.92
NEDD4-203ENST00000502612 ANKRD39Q53RE8 183 aa9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms