RNA–Protein interactions for RNA: ENST00000502557.5

CCHCR1-216, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 3

Gene CCHCR1, Length 662 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-216ENST00000502557 STOX1Q6ZVD7 989 aa21.05■□□□□ 0.96
CCHCR1-216ENST00000502557 LPAR1Q92633 364 aa21.05■□□□□ 0.96
CCHCR1-216ENST00000502557 ASCC2Q9H1I8 757 aaPredicted RBP21.05■□□□□ 0.96
CCHCR1-216ENST00000502557 OSBPP22059 807 aa21.04■□□□□ 0.96
CCHCR1-216ENST00000502557 NOM1Q5C9Z4 860 aaKnown RBP21.04■□□□□ 0.96
CCHCR1-216ENST00000502557 SPICE1Q8N0Z3 855 aa21.04■□□□□ 0.96
CCHCR1-216ENST00000502557 RPAP3Q9H6T3 665 aaPredicted RBP21.04■□□□□ 0.96
CCHCR1-216ENST00000502557 GOPCQ9HD26 462 aa21.04■□□□□ 0.96
CCHCR1-216ENST00000502557 ZSWIM5Q9P217 1185 aa21.04■□□□□ 0.96
CCHCR1-216ENST00000502557 PNMA3Q9UL41 463 aa21.04■□□□□ 0.96
CCHCR1-216ENST00000502557 SYNPO2Q9UMS6 1093 aa21.04■□□□□ 0.96
CCHCR1-216ENST00000502557 USP17L15C9J2P7 530 aa21.03■□□□□ 0.96
CCHCR1-216ENST00000502557 USP17L13C9JLJ4 530 aa21.03■□□□□ 0.96
CCHCR1-216ENST00000502557 USP17L11C9JVI0 530 aa21.03■□□□□ 0.96
CCHCR1-216ENST00000502557 USP17L18D6R9N7 530 aa21.03■□□□□ 0.96
CCHCR1-216ENST00000502557 USP17L22D6RA61 530 aa21.03■□□□□ 0.96
CCHCR1-216ENST00000502557 USP17L17D6RBQ6 530 aa21.03■□□□□ 0.96
CCHCR1-216ENST00000502557 USP17L19D6RCP7 530 aa21.03■□□□□ 0.96
CCHCR1-216ENST00000502557 USP17L20D6RJB6 530 aa21.03■□□□□ 0.96
CCHCR1-216ENST00000502557 REC8O95072 547 aa21.03■□□□□ 0.96
CCHCR1-216ENST00000502557 IRX3P78415 501 aaPredicted RBP21.03■□□□□ 0.96
CCHCR1-216ENST00000502557 USP17L24Q0WX57 530 aa21.03■□□□□ 0.96
CCHCR1-216ENST00000502557 CATSPERGQ6ZRH7 1159 aa21.03■□□□□ 0.96
CCHCR1-216ENST00000502557 LRRC47Q8N1G4 583 aaKnown RBP21.03■□□□□ 0.96
CCHCR1-216ENST00000502557 STX8Q9UNK0 236 aa21.03■□□□□ 0.96
CCHCR1-216ENST00000502557 GREB1LQ9C091 1923 aaPredicted RBP21.03■□□□□ 0.96
CCHCR1-216ENST00000502557 TRDNQ13061 729 aa21.02■□□□□ 0.96
CCHCR1-216ENST00000502557 C17orf99Q6UX52 265 aa21.02■□□□□ 0.96
CCHCR1-216ENST00000502557 P2RX7Q99572 595 aaKnown RBP21.02■□□□□ 0.96
CCHCR1-216ENST00000502557 ZKSCAN3Q9BRR0 538 aa21.02■□□□□ 0.96
CCHCR1-216ENST00000502557 CPA4Q9UI42 421 aa21.02■□□□□ 0.96
CCHCR1-216ENST00000502557 LOC285556D6RIA3 1793 aa21.01■□□□□ 0.95
CCHCR1-216ENST00000502557 F5H6K3 240 aa21.01■□□□□ 0.95
CCHCR1-216ENST00000502557 WDR46O15213 610 aaKnown RBP21.01■□□□□ 0.95
CCHCR1-216ENST00000502557 RAD21O60216 631 aa21.01■□□□□ 0.95
CCHCR1-216ENST00000502557 NDUFB10O96000 172 aa21.01■□□□□ 0.95
CCHCR1-216ENST00000502557 KLRC3Q07444 240 aa21.01■□□□□ 0.95
CCHCR1-216ENST00000502557 RCSD1Q6JBY9 416 aa21.01■□□□□ 0.95
CCHCR1-216ENST00000502557 CYB5R4Q7L1T6 521 aa21.01■□□□□ 0.95
CCHCR1-216ENST00000502557 GMCL1P1Q8NEA9 526 aa21.01■□□□□ 0.95
CCHCR1-216ENST00000502557 SMCR8Q8TEV9 937 aaPredicted RBP21.01■□□□□ 0.95
CCHCR1-216ENST00000502557 ZNF296Q8WUU4 475 aaPredicted RBP21.01■□□□□ 0.95
CCHCR1-216ENST00000502557 PRDM10Q9NQV6 1147 aa21.01■□□□□ 0.95
CCHCR1-216ENST00000502557 FKTNO75072 461 aa21■□□□□ 0.95
CCHCR1-216ENST00000502557 RNF20Q5VTR2 975 aa21■□□□□ 0.95
CCHCR1-216ENST00000502557 RALYLQ86SE5 291 aaKnown RBP21■□□□□ 0.95
CCHCR1-216ENST00000502557 IQCA1Q86XH1 822 aa21■□□□□ 0.95
CCHCR1-216ENST00000502557 NCOA7Q8NI08 942 aa21■□□□□ 0.95
CCHCR1-216ENST00000502557 TTC14Q96N46 770 aa21■□□□□ 0.95
CCHCR1-216ENST00000502557 ZSCAN10Q96SZ4 725 aaPredicted RBP21■□□□□ 0.95
CCHCR1-216ENST00000502557 TMEM47Q9BQJ4 181 aa21■□□□□ 0.95
CCHCR1-216ENST00000502557 LAMA4Q16363 1823 aa20.99■□□□□ 0.95
CCHCR1-216ENST00000502557 BCRP11274 1271 aa20.99■□□□□ 0.95
CCHCR1-216ENST00000502557 TOP1P11387 765 aaKnown RBP20.99■□□□□ 0.95
CCHCR1-216ENST00000502557 HERVK_113P62684 666 aa20.99■□□□□ 0.95
CCHCR1-216ENST00000502557 CCDC178Q5BJE1 867 aa20.99■□□□□ 0.95
CCHCR1-216ENST00000502557 FAM83BQ5T0W9 1011 aa20.99■□□□□ 0.95
CCHCR1-216ENST00000502557 DGKHQ86XP1 1220 aa20.99■□□□□ 0.95
CCHCR1-216ENST00000502557 MB21D2Q8IYB1 491 aaPredicted RBP20.99■□□□□ 0.95
CCHCR1-216ENST00000502557 RASEFQ8IZ41 740 aa20.99■□□□□ 0.95
CCHCR1-216ENST00000502557 NUP88Q99567 741 aaPredicted RBP20.99■□□□□ 0.95
CCHCR1-216ENST00000502557 TANGO6Q9C0B7 1094 aa20.99■□□□□ 0.95
CCHCR1-216ENST00000502557 EPB41L2O43491 1005 aaKnown RBP20.98■□□□□ 0.95
CCHCR1-216ENST00000502557 SP3Q02447 781 aa20.98■□□□□ 0.95
CCHCR1-216ENST00000502557 TSGA10IPQ3SY00 556 aa20.98■□□□□ 0.95
CCHCR1-216ENST00000502557 SLFN13Q68D06 897 aa20.98■□□□□ 0.95
CCHCR1-216ENST00000502557 POTEEQ6S8J3 1075 aa20.98■□□□□ 0.95
CCHCR1-216ENST00000502557 ANKS1AQ92625 1134 aa20.98■□□□□ 0.95
CCHCR1-216ENST00000502557 KCNB2Q92953 911 aa20.98■□□□□ 0.95
CCHCR1-216ENST00000502557 TNKSO95271 1327 aa20.98■□□□□ 0.95
CCHCR1-216ENST00000502557 SPDYE16A6NNV3 312 aaPredicted RBP20.97■□□□□ 0.95
CCHCR1-216ENST00000502557 HSPA4P34932 840 aa20.97■□□□□ 0.95
CCHCR1-216ENST00000502557 GCLCP48506 637 aaPredicted RBP20.97■□□□□ 0.95
CCHCR1-216ENST00000502557 ANTXR2P58335 489 aa20.97■□□□□ 0.95
CCHCR1-216ENST00000502557 COL9A3Q14050 684 aaPredicted RBP20.97■□□□□ 0.95
CCHCR1-216ENST00000502557 ENAHQ8N8S7 591 aaPredicted RBP20.97■□□□□ 0.95
CCHCR1-216ENST00000502557 UBAC1Q9BSL1 405 aa20.97■□□□□ 0.95
CCHCR1-216ENST00000502557 USP26Q9BXU7 913 aa20.97■□□□□ 0.95
CCHCR1-216ENST00000502557 PTPRFP10586 1907 aa20.97■□□□□ 0.95
CCHCR1-216ENST00000502557 FLOT1O75955 427 aa20.96■□□□□ 0.95
CCHCR1-216ENST00000502557 ZKSCAN1P17029 563 aaPredicted RBP20.96■□□□□ 0.95
CCHCR1-216ENST00000502557 COG2Q14746 738 aa20.96■□□□□ 0.95
CCHCR1-216ENST00000502557 SEC23AQ15436 765 aa20.96■□□□□ 0.95
CCHCR1-216ENST00000502557 LBX2Q6XYB7 198 aa20.96■□□□□ 0.95
CCHCR1-216ENST00000502557 RASGRP2Q7LDG7 609 aa20.96■□□□□ 0.95
CCHCR1-216ENST00000502557 ANKRD13CQ8N6S4 541 aa20.96■□□□□ 0.95
CCHCR1-216ENST00000502557 GMCL1Q96IK5 515 aa20.96■□□□□ 0.95
CCHCR1-216ENST00000502557 FBXO28Q9NVF7 368 aa20.96■□□□□ 0.95
CCHCR1-216ENST00000502557 RBPJLQ9UBG7 517 aa20.96■□□□□ 0.95
CCHCR1-216ENST00000502557 PEX10O60683 326 aa20.95■□□□□ 0.94
CCHCR1-216ENST00000502557 MCCP23508 829 aa20.95■□□□□ 0.94
CCHCR1-216ENST00000502557 DSG3P32926 999 aa20.95■□□□□ 0.94
CCHCR1-216ENST00000502557 CAP1Q01518 475 aa20.95■□□□□ 0.94
CCHCR1-216ENST00000502557 CHST3Q7LGC8 479 aa20.95■□□□□ 0.94
CCHCR1-216ENST00000502557 CD99L2Q8TCZ2 262 aa20.95■□□□□ 0.94
CCHCR1-216ENST00000502557 GTF3C2Q8WUA4 911 aaPredicted RBP20.95■□□□□ 0.94
CCHCR1-216ENST00000502557 CHMP4CQ96CF2 233 aa20.95■□□□□ 0.94
CCHCR1-216ENST00000502557 TXNRD2Q9NNW7 524 aa20.95■□□□□ 0.94
CCHCR1-216ENST00000502557 HOXC10Q9NYD6 342 aa20.95■□□□□ 0.94
CCHCR1-216ENST00000502557 MORF4L1Q9UBU8 362 aa20.95■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 73.2 ms