RNA–Protein interactions for RNA: ENST00000502299.5

CLDND1-206, Transcript of claudin domain containing 1, humanhuman

TSL 2

Gene CLDND1, Length 865 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-206ENST00000502299 PNMA3Q9UL41 463 aa17.12■□□□□ 0.33
CLDND1-206ENST00000502299 ROBO3Q96MS0 1386 aa17.12■□□□□ 0.33
CLDND1-206ENST00000502299 FOXP2O15409 715 aa17.11■□□□□ 0.33
CLDND1-206ENST00000502299 SGPL1O95470 568 aa17.11■□□□□ 0.33
CLDND1-206ENST00000502299 FGAP02671 866 aa17.11■□□□□ 0.33
CLDND1-206ENST00000502299 TREML2Q5T2D2 321 aa17.11■□□□□ 0.33
CLDND1-206ENST00000502299 RUFY2Q8WXA3 655 aa17.11■□□□□ 0.33
CLDND1-206ENST00000502299 HTATIP2Q9BUP3 242 aa17.11■□□□□ 0.33
CLDND1-206ENST00000502299 KANSL2Q9H9L4 492 aa17.11■□□□□ 0.33
CLDND1-206ENST00000502299 EMILIN3Q9NT22 766 aa17.11■□□□□ 0.33
CLDND1-206ENST00000502299 FARP2O94887 1054 aaPredicted RBP17.1■□□□□ 0.33
CLDND1-206ENST00000502299 INHAP05111 366 aa17.1■□□□□ 0.33
CLDND1-206ENST00000502299 RASA1P20936 1047 aa17.1■□□□□ 0.33
CLDND1-206ENST00000502299 HOXA7P31268 230 aaPredicted RBP17.1■□□□□ 0.33
CLDND1-206ENST00000502299 ACER1Q8TDN7 264 aa17.1■□□□□ 0.33
CLDND1-206ENST00000502299 ARHGEF10LQ9HCE6 1279 aa17.1■□□□□ 0.33
CLDND1-206ENST00000502299 ANAPC4Q9UJX5 808 aa17.1■□□□□ 0.33
CLDND1-206ENST00000502299 TNPO2O14787 897 aaKnown RBP17.09■□□□□ 0.33
CLDND1-206ENST00000502299 IRF5Q13568 498 aa17.09■□□□□ 0.33
CLDND1-206ENST00000502299 PXYLP1Q8TE99 480 aa17.09■□□□□ 0.33
CLDND1-206ENST00000502299 SMCR8Q8TEV9 937 aaPredicted RBP17.09■□□□□ 0.33
CLDND1-206ENST00000502299 C12orf42Q96LP6 360 aa17.09■□□□□ 0.33
CLDND1-206ENST00000502299 SH2D4AQ9H788 454 aa17.09■□□□□ 0.33
CLDND1-206ENST00000502299 PPP4R2Q9NY27 417 aa17.09■□□□□ 0.33
CLDND1-206ENST00000502299 LAMA3Q16787 3333 aa17.09■□□□□ 0.33
CLDND1-206ENST00000502299 ZMYM6O95789 1325 aa17.08■□□□□ 0.32
CLDND1-206ENST00000502299 PRDM1O75626 825 aa17.08■□□□□ 0.32
CLDND1-206ENST00000502299 CHMLP26374 656 aa17.08■□□□□ 0.32
CLDND1-206ENST00000502299 ICA1Q05084 483 aa17.08■□□□□ 0.32
CLDND1-206ENST00000502299 ZYXQ15942 572 aaKnown RBP17.08■□□□□ 0.32
CLDND1-206ENST00000502299 SIAH1Q8IUQ4 282 aa17.08■□□□□ 0.32
CLDND1-206ENST00000502299 ANKRD13CQ8N6S4 541 aa17.08■□□□□ 0.32
CLDND1-206ENST00000502299 DEFB118Q96PH6 123 aa17.08■□□□□ 0.32
CLDND1-206ENST00000502299 TMX2Q9Y320 296 aa17.08■□□□□ 0.32
CLDND1-206ENST00000502299 NR2E3Q9Y5X4 410 aa17.08■□□□□ 0.32
CLDND1-206ENST00000502299 PTPRFP10586 1907 aa17.08■□□□□ 0.32
CLDND1-206ENST00000502299 A0A1W2PRG0 241 aa17.07■□□□□ 0.32
CLDND1-206ENST00000502299 GCLCP48506 637 aaPredicted RBP17.07■□□□□ 0.32
CLDND1-206ENST00000502299 IRX3P78415 501 aaPredicted RBP17.07■□□□□ 0.32
CLDND1-206ENST00000502299 CTDSPL2Q05D32 466 aa17.07■□□□□ 0.32
CLDND1-206ENST00000502299 DSCC1Q9BVC3 393 aa17.07■□□□□ 0.32
CLDND1-206ENST00000502299 ASCC2Q9H1I8 757 aaPredicted RBP17.07■□□□□ 0.32
CLDND1-206ENST00000502299 PAK6Q9NQU5 681 aaPredicted RBP17.07■□□□□ 0.32
CLDND1-206ENST00000502299 RAD50Q92878 1312 aa17.06■□□□□ 0.32
CLDND1-206ENST00000502299 USP17L15C9J2P7 530 aa17.06■□□□□ 0.32
CLDND1-206ENST00000502299 USP17L13C9JLJ4 530 aa17.06■□□□□ 0.32
CLDND1-206ENST00000502299 USP17L11C9JVI0 530 aa17.06■□□□□ 0.32
CLDND1-206ENST00000502299 USP17L18D6R9N7 530 aa17.06■□□□□ 0.32
CLDND1-206ENST00000502299 USP17L22D6RA61 530 aa17.06■□□□□ 0.32
CLDND1-206ENST00000502299 USP17L17D6RBQ6 530 aa17.06■□□□□ 0.32
CLDND1-206ENST00000502299 USP17L19D6RCP7 530 aa17.06■□□□□ 0.32
CLDND1-206ENST00000502299 USP17L20D6RJB6 530 aa17.06■□□□□ 0.32
CLDND1-206ENST00000502299 TFRCP02786 760 aaKnown RBP17.06■□□□□ 0.32
CLDND1-206ENST00000502299 TSPY3P0CV98 308 aa17.06■□□□□ 0.32
CLDND1-206ENST00000502299 TSPY8P0CW00 308 aa17.06■□□□□ 0.32
CLDND1-206ENST00000502299 EEF2P13639 858 aaKnown RBP17.06■□□□□ 0.32
CLDND1-206ENST00000502299 TFAP4Q01664 338 aa17.06■□□□□ 0.32
CLDND1-206ENST00000502299 USP17L24Q0WX57 530 aa17.06■□□□□ 0.32
CLDND1-206ENST00000502299 BMP2KLQ5H9B9 411 aa17.06■□□□□ 0.32
CLDND1-206ENST00000502299 NEDD1Q8NHV4 660 aa17.06■□□□□ 0.32
CLDND1-206ENST00000502299 GNL3Q9BVP2 549 aaKnown RBP eCLIP17.06■□□□□ 0.32
CLDND1-206ENST00000502299 CTNNA3Q9UI47 895 aa17.06■□□□□ 0.32
CLDND1-206ENST00000502299 MYH8P13535 1937 aa17.06■□□□□ 0.32
CLDND1-206ENST00000502299 ZNF213O14771 459 aa17.05■□□□□ 0.32
CLDND1-206ENST00000502299 FGRP09769 529 aa17.05■□□□□ 0.32
CLDND1-206ENST00000502299 PCP11498 1178 aaKnown RBP17.05■□□□□ 0.32
CLDND1-206ENST00000502299 ATP2B2Q01814 1243 aa17.05■□□□□ 0.32
CLDND1-206ENST00000502299 CATSPERGQ6ZRH7 1159 aa17.05■□□□□ 0.32
CLDND1-206ENST00000502299 LPAR1Q92633 364 aa17.05■□□□□ 0.32
CLDND1-206ENST00000502299 P2RX7Q99572 595 aaKnown RBP17.05■□□□□ 0.32
CLDND1-206ENST00000502299 CRISPLD2Q9H0B8 497 aa17.05■□□□□ 0.32
CLDND1-206ENST00000502299 NYAP2Q9P242 653 aa17.05■□□□□ 0.32
CLDND1-206ENST00000502299 DDX52Q9Y2R4 599 aaKnown RBP eCLIP17.05■□□□□ 0.32
CLDND1-206ENST00000502299 MGAMO43451 1857 aa17.05■□□□□ 0.32
CLDND1-206ENST00000502299 LOC285556D6RIA3 1793 aa17.05■□□□□ 0.32
CLDND1-206ENST00000502299 TSPY2A6NKD2 308 aa17.04■□□□□ 0.32
CLDND1-206ENST00000502299 ORC4O43929 436 aa17.04■□□□□ 0.32
CLDND1-206ENST00000502299 EVI5O60447 810 aa17.04■□□□□ 0.32
CLDND1-206ENST00000502299 VCAM1P19320 739 aa17.04■□□□□ 0.32
CLDND1-206ENST00000502299 FAM110CQ1W6H9 321 aa17.04■□□□□ 0.32
CLDND1-206ENST00000502299 PPP4R3BQ5MIZ7 849 aa17.04■□□□□ 0.32
CLDND1-206ENST00000502299 SKAP1Q86WV1 359 aa17.04■□□□□ 0.32
CLDND1-206ENST00000502299 CLEC10AQ8IUN9 316 aa17.04■□□□□ 0.32
CLDND1-206ENST00000502299 GTF3C2Q8WUA4 911 aaPredicted RBP17.04■□□□□ 0.32
CLDND1-206ENST00000502299 VCPKMTQ9H867 229 aa17.04■□□□□ 0.32
CLDND1-206ENST00000502299 INCENPQ9NQS7 918 aa17.04■□□□□ 0.32
CLDND1-206ENST00000502299 IGKV6D-41A0A0C4DH26 115 aa17.03■□□□□ 0.32
CLDND1-206ENST00000502299 SOX1O00570 391 aaPredicted RBP17.03■□□□□ 0.32
CLDND1-206ENST00000502299 HAND2P61296 217 aa17.03■□□□□ 0.32
CLDND1-206ENST00000502299 FAM47AQ5JRC9 791 aa17.03■□□□□ 0.32
CLDND1-206ENST00000502299 AKNAD1Q5T1N1 836 aa17.03■□□□□ 0.32
CLDND1-206ENST00000502299 MFSD6Q6ZSS7 791 aa17.03■□□□□ 0.32
CLDND1-206ENST00000502299 DIS3LQ8TF46 1054 aaKnown RBP17.03■□□□□ 0.32
CLDND1-206ENST00000502299 MKL1Q969V6 931 aa17.03■□□□□ 0.32
CLDND1-206ENST00000502299 COA7Q96BR5 231 aa17.03■□□□□ 0.32
CLDND1-206ENST00000502299 PAWRQ96IZ0 340 aaKnown RBP17.03■□□□□ 0.32
CLDND1-206ENST00000502299 RNF41Q9H4P4 317 aaPredicted RBP17.03■□□□□ 0.32
CLDND1-206ENST00000502299 GOPCQ9HD26 462 aa17.03■□□□□ 0.32
CLDND1-206ENST00000502299 TOMM22Q9NS69 142 aa17.03■□□□□ 0.32
CLDND1-206ENST00000502299 MTMR4Q9NYA4 1195 aa17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms