RNA–Protein interactions for RNA: ENST00000498722.2

LMNA-217, Transcript of lamin A/C, humanhuman

TSL 2

Gene LMNA, Length 1,348 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-217ENST00000498722 ASCC2Q9H1I8 757 aaPredicted RBP19.05■□□□□ 0.64
LMNA-217ENST00000498722 VCAM1P19320 739 aa19.04■□□□□ 0.64
LMNA-217ENST00000498722 HSPA4P34932 840 aa19.04■□□□□ 0.64
LMNA-217ENST00000498722 KIF22Q14807 665 aa19.04■□□□□ 0.64
LMNA-217ENST00000498722 MFSD6Q6ZSS7 791 aa19.04■□□□□ 0.64
LMNA-217ENST00000498722 CD99L2Q8TCZ2 262 aa19.04■□□□□ 0.64
LMNA-217ENST00000498722 DDX52Q9Y2R4 599 aaKnown RBP eCLIP19.04■□□□□ 0.64
LMNA-217ENST00000498722 COL11A1P12107 1806 aaPredicted RBP19.04■□□□□ 0.64
LMNA-217ENST00000498722 DOCK3Q8IZD9 2030 aa19.04■□□□□ 0.64
LMNA-217ENST00000498722 CTU1Q7Z7A3 348 aaKnown RBP19.03■□□□□ 0.64
LMNA-217ENST00000498722 SPICE1Q8N0Z3 855 aa19.03■□□□□ 0.64
LMNA-217ENST00000498722 C12orf42Q96LP6 360 aa19.03■□□□□ 0.64
LMNA-217ENST00000498722 GNL3Q9BVP2 549 aaKnown RBP eCLIP19.03■□□□□ 0.64
LMNA-217ENST00000498722 TANGO6Q9C0B7 1094 aa19.03■□□□□ 0.64
LMNA-217ENST00000498722 GOPCQ9HD26 462 aa19.03■□□□□ 0.64
LMNA-217ENST00000498722 ADGRA2Q96PE1 1338 aa19.03■□□□□ 0.64
LMNA-217ENST00000498722 ST18O60284 1047 aa19.02■□□□□ 0.64
LMNA-217ENST00000498722 AKNAD1Q5T1N1 836 aa19.02■□□□□ 0.64
LMNA-217ENST00000498722 C17orf99Q6UX52 265 aa19.02■□□□□ 0.64
LMNA-217ENST00000498722 SIAH1Q8IUQ4 282 aa19.02■□□□□ 0.64
LMNA-217ENST00000498722 TBC1D10CQ8IV04 446 aa19.02■□□□□ 0.64
LMNA-217ENST00000498722 ANKRD13CQ8N6S4 541 aa19.02■□□□□ 0.64
LMNA-217ENST00000498722 NEDD1Q8NHV4 660 aa19.02■□□□□ 0.64
LMNA-217ENST00000498722 CEP95Q96GE4 821 aa19.02■□□□□ 0.64
LMNA-217ENST00000498722 RNF41Q9H4P4 317 aaPredicted RBP19.02■□□□□ 0.64
LMNA-217ENST00000498722 RPAP3Q9H6T3 665 aaPredicted RBP19.02■□□□□ 0.64
LMNA-217ENST00000498722 CLIP2Q9UDT6 1046 aa19.02■□□□□ 0.64
LMNA-217ENST00000498722 TMX2Q9Y320 296 aa19.02■□□□□ 0.64
LMNA-217ENST00000498722 PLIN4Q96Q06 1357 aa19.01■□□□□ 0.63
LMNA-217ENST00000498722 USP17L15C9J2P7 530 aa19.01■□□□□ 0.63
LMNA-217ENST00000498722 USP17L13C9JLJ4 530 aa19.01■□□□□ 0.63
LMNA-217ENST00000498722 USP17L11C9JVI0 530 aa19.01■□□□□ 0.63
LMNA-217ENST00000498722 USP17L18D6R9N7 530 aa19.01■□□□□ 0.63
LMNA-217ENST00000498722 USP17L22D6RA61 530 aa19.01■□□□□ 0.63
LMNA-217ENST00000498722 USP17L17D6RBQ6 530 aa19.01■□□□□ 0.63
LMNA-217ENST00000498722 USP17L19D6RCP7 530 aa19.01■□□□□ 0.63
LMNA-217ENST00000498722 USP17L20D6RJB6 530 aa19.01■□□□□ 0.63
LMNA-217ENST00000498722 ORC4O43929 436 aa19.01■□□□□ 0.63
LMNA-217ENST00000498722 HOXA7P31268 230 aaPredicted RBP19.01■□□□□ 0.63
LMNA-217ENST00000498722 SLC4A3P48751 1232 aa19.01■□□□□ 0.63
LMNA-217ENST00000498722 PTH1RQ03431 593 aa19.01■□□□□ 0.63
LMNA-217ENST00000498722 USP17L24Q0WX57 530 aa19.01■□□□□ 0.63
LMNA-217ENST00000498722 SAMD1Q6SPF0 538 aaPredicted RBP19.01■□□□□ 0.63
LMNA-217ENST00000498722 STAG1Q8WVM7 1258 aa19.01■□□□□ 0.63
LMNA-217ENST00000498722 NBPF3Q9H094 633 aa19.01■□□□□ 0.63
LMNA-217ENST00000498722 VCPKMTQ9H867 229 aa19.01■□□□□ 0.63
LMNA-217ENST00000498722 TACC3Q9Y6A5 838 aa19.01■□□□□ 0.63
LMNA-217ENST00000498722 RLFQ13129 1914 aa19.01■□□□□ 0.63
LMNA-217ENST00000498722 TTLL1O95922 423 aa19■□□□□ 0.63
LMNA-217ENST00000498722 ARHGEF6Q15052 776 aa19■□□□□ 0.63
LMNA-217ENST00000498722 LPAR1Q92633 364 aa19■□□□□ 0.63
LMNA-217ENST00000498722 P2RX7Q99572 595 aaKnown RBP19■□□□□ 0.63
LMNA-217ENST00000498722 MTMR4Q9NYA4 1195 aa19■□□□□ 0.63
LMNA-217ENST00000498722 NYAP2Q9P242 653 aa19■□□□□ 0.63
LMNA-217ENST00000498722 STX8Q9UNK0 236 aa19■□□□□ 0.63
LMNA-217ENST00000498722 TRIM17Q9Y577 477 aa19■□□□□ 0.63
LMNA-217ENST00000498722 NEDD4P46934 1319 aa19■□□□□ 0.63
LMNA-217ENST00000498722 IGKV6D-41A0A0C4DH26 115 aa19■□□□□ 0.63
LMNA-217ENST00000498722 NMT2O60551 498 aa19■□□□□ 0.63
LMNA-217ENST00000498722 PCP11498 1178 aaKnown RBP19■□□□□ 0.63
LMNA-217ENST00000498722 GCLCP48506 637 aaPredicted RBP19■□□□□ 0.63
LMNA-217ENST00000498722 HERVK_113P62684 666 aa19■□□□□ 0.63
LMNA-217ENST00000498722 LACTBP83111 547 aaPredicted RBP19■□□□□ 0.63
LMNA-217ENST00000498722 LRRC47Q8N1G4 583 aaKnown RBP19■□□□□ 0.63
LMNA-217ENST00000498722 EFCC1Q9HA90 598 aa19■□□□□ 0.63
LMNA-217ENST00000498722 ISY1Q9ULR0 285 aaKnown RBP19■□□□□ 0.63
LMNA-217ENST00000498722 U3KPZ7 1027 aaPredicted RBP19■□□□□ 0.63
LMNA-217ENST00000498722 FGRP09769 529 aa18.99■□□□□ 0.63
LMNA-217ENST00000498722 BCRP11274 1271 aa18.99■□□□□ 0.63
LMNA-217ENST00000498722 KIAA1755Q5JYT7 1200 aa18.99■□□□□ 0.63
LMNA-217ENST00000498722 PPP4R3BQ5MIZ7 849 aa18.99■□□□□ 0.63
LMNA-217ENST00000498722 CATSPERGQ6ZRH7 1159 aa18.99■□□□□ 0.63
LMNA-217ENST00000498722 ESR2Q92731 530 aa18.99■□□□□ 0.63
LMNA-217ENST00000498722 MAP4K1Q92918 833 aa18.99■□□□□ 0.63
LMNA-217ENST00000498722 PAGR1Q9BTK6 254 aa18.99■□□□□ 0.63
LMNA-217ENST00000498722 ARHGAP39Q9C0H5 1083 aa18.99■□□□□ 0.63
LMNA-217ENST00000498722 MCOLN1Q9GZU1 580 aa18.99■□□□□ 0.63
LMNA-217ENST00000498722 K7ELQ4 463 aaPredicted RBP18.98■□□□□ 0.63
LMNA-217ENST00000498722 WDR46O15213 610 aaKnown RBP18.98■□□□□ 0.63
LMNA-217ENST00000498722 FLOT1O75955 427 aa18.98■□□□□ 0.63
LMNA-217ENST00000498722 FMNL1O95466 1100 aaPredicted RBP18.98■□□□□ 0.63
LMNA-217ENST00000498722 MCM2P49736 904 aa18.98■□□□□ 0.63
LMNA-217ENST00000498722 RNF20Q5VTR2 975 aa18.98■□□□□ 0.63
LMNA-217ENST00000498722 OTOP1Q7RTM1 612 aa18.98■□□□□ 0.63
LMNA-217ENST00000498722 CHMP4CQ96CF2 233 aa18.98■□□□□ 0.63
LMNA-217ENST00000498722 B4E1Z4 1266 aa18.97■□□□□ 0.63
LMNA-217ENST00000498722 PSMC4P43686 418 aa18.97■□□□□ 0.63
LMNA-217ENST00000498722 FAM110CQ1W6H9 321 aa18.97■□□□□ 0.63
LMNA-217ENST00000498722 FAM83BQ5T0W9 1011 aa18.97■□□□□ 0.63
LMNA-217ENST00000498722 KCNB2Q92953 911 aa18.97■□□□□ 0.63
LMNA-217ENST00000498722 IL17RBQ9NRM6 502 aa18.97■□□□□ 0.63
LMNA-217ENST00000498722 MTMR7Q9Y216 660 aa18.97■□□□□ 0.63
LMNA-217ENST00000498722 RBM8AQ9Y5S9 174 aaKnown RBP18.97■□□□□ 0.63
LMNA-217ENST00000498722 A0A0G2JMZ2 1700 aa18.96■□□□□ 0.63
LMNA-217ENST00000498722 F5H6K3 240 aa18.96■□□□□ 0.63
LMNA-217ENST00000498722 PEX10O60683 326 aa18.96■□□□□ 0.63
LMNA-217ENST00000498722 KDM4AO75164 1064 aa18.96■□□□□ 0.63
LMNA-217ENST00000498722 ZKSCAN1P17029 563 aaPredicted RBP18.96■□□□□ 0.63
LMNA-217ENST00000498722 FCGRTP55899 365 aa18.96■□□□□ 0.63
LMNA-217ENST00000498722 KLRC3Q07444 240 aa18.96■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms