RNA–Protein interactions for RNA: ENST00000498497.2

PBX1-211, Transcript of PBX homeobox 1, humanhuman

TSL 3

Gene PBX1, Length 3,101 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX1-211ENST00000498497 BATF3Q9NR55 127 aa12.98□□□□□ -0.33
PBX1-211ENST00000498497 ZRANB1Q9UGI0 708 aa12.98□□□□□ -0.33
PBX1-211ENST00000498497 CLTCL1P53675 1640 aa12.98□□□□□ -0.33
PBX1-211ENST00000498497 NUTM2FA1L443 756 aa12.97□□□□□ -0.33
PBX1-211ENST00000498497 AHCYL1O43865 530 aa12.97□□□□□ -0.33
PBX1-211ENST00000498497 ATP5JP18859 108 aa12.97□□□□□ -0.33
PBX1-211ENST00000498497 BMP6P22004 513 aa12.97□□□□□ -0.33
PBX1-211ENST00000498497 HLTFQ14527 1009 aaKnown RBP eCLIP12.97□□□□□ -0.33
PBX1-211ENST00000498497 C14orf80Q86SX3 495 aa12.97□□□□□ -0.33
PBX1-211ENST00000498497 AACSQ86V21 672 aa12.97□□□□□ -0.33
PBX1-211ENST00000498497 ANKRD13CQ8N6S4 541 aa12.97□□□□□ -0.33
PBX1-211ENST00000498497 NUP160Q12769 1436 aa12.97□□□□□ -0.33
PBX1-211ENST00000498497 A0A0G2JLW4 131 aa12.97□□□□□ -0.33
PBX1-211ENST00000498497 FAM107AO95990 144 aa12.97□□□□□ -0.33
PBX1-211ENST00000498497 FESP07332 822 aa12.97□□□□□ -0.33
PBX1-211ENST00000498497 PARP1P09874 1014 aaKnown RBP12.97□□□□□ -0.33
PBX1-211ENST00000498497 IGHMBP2P38935 993 aaKnown RBP12.97□□□□□ -0.33
PBX1-211ENST00000498497 MDH1P40925 334 aaKnown RBP12.97□□□□□ -0.33
PBX1-211ENST00000498497 ERVK-24P63145 666 aa12.97□□□□□ -0.33
PBX1-211ENST00000498497 NUGGCQ68CJ6 796 aa12.97□□□□□ -0.33
PBX1-211ENST00000498497 AIFM3Q96NN9 605 aa12.97□□□□□ -0.33
PBX1-211ENST00000498497 TRIM33Q9UPN9 1127 aa12.97□□□□□ -0.33
PBX1-211ENST00000498497 MYOM1P52179 1685 aa12.97□□□□□ -0.33
PBX1-211ENST00000498497 ITSN2Q9NZM3 1697 aa12.97□□□□□ -0.33
PBX1-211ENST00000498497 ANXA1P04083 346 aa12.97□□□□□ -0.33
PBX1-211ENST00000498497 RXRAP19793 462 aa12.97□□□□□ -0.33
PBX1-211ENST00000498497 IFNAR2P48551 515 aa12.97□□□□□ -0.33
PBX1-211ENST00000498497 ATP8B2P98198 1209 aa12.97□□□□□ -0.33
PBX1-211ENST00000498497 ANKRD20A2Q5SQ80 823 aa12.97□□□□□ -0.33
PBX1-211ENST00000498497 SLC9C2Q5TAH2 1124 aa12.97□□□□□ -0.33
PBX1-211ENST00000498497 ANKRD20A1Q5TYW2 823 aa12.97□□□□□ -0.33
PBX1-211ENST00000498497 ANKRD20A3Q5VUR7 823 aa12.97□□□□□ -0.33
PBX1-211ENST00000498497 CNBD1Q8NA66 436 aa12.97□□□□□ -0.33
PBX1-211ENST00000498497 HOMER3Q9NSC5 361 aa12.97□□□□□ -0.33
PBX1-211ENST00000498497 IKBKBO14920 756 aa12.96□□□□□ -0.33
PBX1-211ENST00000498497 AFMP43652 599 aa12.96□□□□□ -0.33
PBX1-211ENST00000498497 ANKRD1Q15327 319 aa12.96□□□□□ -0.33
PBX1-211ENST00000498497 LINC00301Q8NCQ3 95 aa12.96□□□□□ -0.33
PBX1-211ENST00000498497 RBM17Q96I25 401 aaKnown RBP12.96□□□□□ -0.33
PBX1-211ENST00000498497 CORO1CQ9ULV4 474 aaPredicted RBP12.96□□□□□ -0.33
PBX1-211ENST00000498497 ZNF233A6NK53 670 aa12.96□□□□□ -0.34
PBX1-211ENST00000498497 FERP16591 822 aa12.96□□□□□ -0.34
PBX1-211ENST00000498497 TMEM154Q6P9G4 183 aa12.96□□□□□ -0.34
PBX1-211ENST00000498497 TAX1BP1Q86VP1 789 aa12.96□□□□□ -0.34
PBX1-211ENST00000498497 ARHGEF25Q86VW2 580 aa12.96□□□□□ -0.34
PBX1-211ENST00000498497 MFN1Q8IWA4 741 aa12.96□□□□□ -0.34
PBX1-211ENST00000498497 PHC3Q8NDX5 983 aa12.96□□□□□ -0.34
PBX1-211ENST00000498497 NEK1Q96PY6 1258 aa12.96□□□□□ -0.34
PBX1-211ENST00000498497 STAP2Q9UGK3 403 aa12.96□□□□□ -0.34
PBX1-211ENST00000498497 SUPT3HO75486 399 aa12.95□□□□□ -0.34
PBX1-211ENST00000498497 CARSP49589 748 aaKnown RBP12.95□□□□□ -0.34
PBX1-211ENST00000498497 POLA2Q14181 598 aa12.95□□□□□ -0.34
PBX1-211ENST00000498497 NSUN7Q8NE18 718 aaKnown RBP12.95□□□□□ -0.34
PBX1-211ENST00000498497 ZMYND8Q9ULU4 1186 aaPredicted RBP12.95□□□□□ -0.34
PBX1-211ENST00000498497 FOXO3O43524 673 aa12.95□□□□□ -0.34
PBX1-211ENST00000498497 KRT9P35527 623 aa12.95□□□□□ -0.34
PBX1-211ENST00000498497 HLFQ16534 295 aa12.95□□□□□ -0.34
PBX1-211ENST00000498497 LMBRD2Q68DH5 695 aaPredicted RBP12.95□□□□□ -0.34
PBX1-211ENST00000498497 SAPCD2Q86UD0 394 aa12.95□□□□□ -0.34
PBX1-211ENST00000498497 SPIRE2Q8WWL2 714 aa12.95□□□□□ -0.34
PBX1-211ENST00000498497 SYT15Q9BQS2 421 aa12.95□□□□□ -0.34
PBX1-211ENST00000498497 CCDC113Q9H0I3 377 aa12.95□□□□□ -0.34
PBX1-211ENST00000498497 ACTR5Q9H9F9 607 aaPredicted RBP12.95□□□□□ -0.34
PBX1-211ENST00000498497 GOLGA6L10A6NI86 522 aa12.95□□□□□ -0.34
PBX1-211ENST00000498497 DCDC2CA8MYV0 355 aa12.95□□□□□ -0.34
PBX1-211ENST00000498497 NCK2O43639 380 aa12.95□□□□□ -0.34
PBX1-211ENST00000498497 CREB3O43889 395 aa12.95□□□□□ -0.34
PBX1-211ENST00000498497 GUCY2DQ02846 1103 aa12.95□□□□□ -0.34
PBX1-211ENST00000498497 C19orf44Q9H6X5 657 aa12.95□□□□□ -0.34
PBX1-211ENST00000498497 TSPYL4Q9UJ04 414 aa12.95□□□□□ -0.34
PBX1-211ENST00000498497 KDM5AP29375 1690 aaKnown RBP12.94□□□□□ -0.34
PBX1-211ENST00000498497 GMNCA6NCL1 334 aa12.94□□□□□ -0.34
PBX1-211ENST00000498497 CTDNEP1O95476 244 aa12.94□□□□□ -0.34
PBX1-211ENST00000498497 TBX2Q13207 712 aaPredicted RBP12.94□□□□□ -0.34
PBX1-211ENST00000498497 P3H1Q32P28 736 aa12.94□□□□□ -0.34
PBX1-211ENST00000498497 CENPOQ9BU64 300 aa12.94□□□□□ -0.34
PBX1-211ENST00000498497 PPRC1Q5VV67 1664 aaKnown RBP12.94□□□□□ -0.34
PBX1-211ENST00000498497 TRAPPC8Q9Y2L5 1435 aa12.94□□□□□ -0.34
PBX1-211ENST00000498497 NEDD4P46934 1319 aa12.94□□□□□ -0.34
PBX1-211ENST00000498497 CYP27B1O15528 508 aa12.94□□□□□ -0.34
PBX1-211ENST00000498497 MCM3P25205 808 aa12.94□□□□□ -0.34
PBX1-211ENST00000498497 MECOMQ03112 1051 aa12.94□□□□□ -0.34
PBX1-211ENST00000498497 CCDC15Q0P6D6 951 aa12.94□□□□□ -0.34
PBX1-211ENST00000498497 LTV1Q96GA3 475 aaPredicted RBP12.94□□□□□ -0.34
PBX1-211ENST00000498497 MS4A14Q96JA4 679 aa12.94□□□□□ -0.34
PBX1-211ENST00000498497 TAB2Q9NYJ8 693 aa12.94□□□□□ -0.34
PBX1-211ENST00000498497 NPHP3-ACAD11A0A0J9YXS1 232 aa12.93□□□□□ -0.34
PBX1-211ENST00000498497 RASSF10A6NK89 507 aa12.93□□□□□ -0.34
PBX1-211ENST00000498497 MGRN1O60291 552 aa12.93□□□□□ -0.34
PBX1-211ENST00000498497 IMPDH2P12268 514 aa12.93□□□□□ -0.34
PBX1-211ENST00000498497 MAGEA8P43361 318 aa12.93□□□□□ -0.34
PBX1-211ENST00000498497 AMPD2Q01433 879 aa12.93□□□□□ -0.34
PBX1-211ENST00000498497 MYBPC3Q14896 1274 aa12.93□□□□□ -0.34
PBX1-211ENST00000498497 EAPPQ56P03 285 aaPredicted RBP12.93□□□□□ -0.34
PBX1-211ENST00000498497 GKAP1Q5VSY0 366 aaPredicted RBP12.93□□□□□ -0.34
PBX1-211ENST00000498497 METTL16Q86W50 562 aaKnown RBP12.93□□□□□ -0.34
PBX1-211ENST00000498497 CLASRPQ8N2M8 674 aaKnown RBP12.93□□□□□ -0.34
PBX1-211ENST00000498497 NLRP2Q9NX02 1062 aa12.93□□□□□ -0.34
PBX1-211ENST00000498497 TLR7Q9NYK1 1049 aaKnown RBP12.93□□□□□ -0.34
PBX1-211ENST00000498497 CHD1O14646 1710 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms