RNA–Protein interactions for RNA: ENST00000497960.5

NUP50-219, Transcript of nucleoporin 50, humanhuman

TSL 2

Gene NUP50, Length 986 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-219ENST00000497960 PEX10O60683 326 aa18.28■□□□□ 0.52
NUP50-219ENST00000497960 SLC3A2P08195 630 aaKnown RBP18.28■□□□□ 0.52
NUP50-219ENST00000497960 MTFR1Q15390 333 aa18.28■□□□□ 0.52
NUP50-219ENST00000497960 TICAM2Q86XR7 235 aa18.28■□□□□ 0.52
NUP50-219ENST00000497960 SIAH1Q8IUQ4 282 aa18.28■□□□□ 0.52
NUP50-219ENST00000497960 TANGO6Q9C0B7 1094 aa18.28■□□□□ 0.52
NUP50-219ENST00000497960 CWC22Q9HCG8 908 aaKnown RBP18.28■□□□□ 0.52
NUP50-219ENST00000497960 HOXC10Q9NYD6 342 aa18.28■□□□□ 0.52
NUP50-219ENST00000497960 ROBO3Q96MS0 1386 aa18.28■□□□□ 0.52
NUP50-219ENST00000497960 EEF2P13639 858 aaKnown RBP18.27■□□□□ 0.52
NUP50-219ENST00000497960 ELNP15502 786 aa18.27■□□□□ 0.52
NUP50-219ENST00000497960 RASA1P20936 1047 aa18.27■□□□□ 0.52
NUP50-219ENST00000497960 COG2Q14746 738 aa18.27■□□□□ 0.52
NUP50-219ENST00000497960 Q3C1V9 767 aa18.27■□□□□ 0.52
NUP50-219ENST00000497960 LBX2Q6XYB7 198 aa18.27■□□□□ 0.52
NUP50-219ENST00000497960 ZNF444Q8N0Y2 327 aaPredicted RBP18.27■□□□□ 0.52
NUP50-219ENST00000497960 NUDT12Q9BQG2 462 aa18.27■□□□□ 0.52
NUP50-219ENST00000497960 RNF208Q9H0X6 261 aa18.27■□□□□ 0.52
NUP50-219ENST00000497960 VCPKMTQ9H867 229 aa18.27■□□□□ 0.52
NUP50-219ENST00000497960 HELLSQ9NRZ9 838 aa18.27■□□□□ 0.52
NUP50-219ENST00000497960 SPDYE16A6NNV3 312 aaPredicted RBP18.26■□□□□ 0.51
NUP50-219ENST00000497960 INHAP05111 366 aa18.26■□□□□ 0.51
NUP50-219ENST00000497960 CCL5P13501 91 aa18.26■□□□□ 0.51
NUP50-219ENST00000497960 CCDC129Q6ZRS4 1044 aa18.26■□□□□ 0.51
NUP50-219ENST00000497960 SPICE1Q8N0Z3 855 aa18.26■□□□□ 0.51
NUP50-219ENST00000497960 NKX2-3Q8TAU0 364 aa18.26■□□□□ 0.51
NUP50-219ENST00000497960 SOCS4Q8WXH5 440 aa18.26■□□□□ 0.51
NUP50-219ENST00000497960 RILPL2Q969X0 211 aa18.26■□□□□ 0.51
NUP50-219ENST00000497960 GOPCQ9HD26 462 aa18.26■□□□□ 0.51
NUP50-219ENST00000497960 GJD2Q9UKL4 321 aa18.26■□□□□ 0.51
NUP50-219ENST00000497960 RAD21O60216 631 aa18.25■□□□□ 0.51
NUP50-219ENST00000497960 PDE4BQ07343 736 aa18.25■□□□□ 0.51
NUP50-219ENST00000497960 POTEEQ6S8J3 1075 aa18.25■□□□□ 0.51
NUP50-219ENST00000497960 PLEKHH3Q7Z736 793 aa18.25■□□□□ 0.51
NUP50-219ENST00000497960 PLEKHM2Q8IWE5 1019 aa18.25■□□□□ 0.51
NUP50-219ENST00000497960 PORCNQ9H237 461 aa18.25■□□□□ 0.51
NUP50-219ENST00000497960 OSBPL3Q9H4L5 887 aa18.25■□□□□ 0.51
NUP50-219ENST00000497960 WDR46O15213 610 aaKnown RBP18.24■□□□□ 0.51
NUP50-219ENST00000497960 PRDM1O75626 825 aa18.24■□□□□ 0.51
NUP50-219ENST00000497960 CNMDO75829 334 aa18.24■□□□□ 0.51
NUP50-219ENST00000497960 FLOT1O75955 427 aa18.24■□□□□ 0.51
NUP50-219ENST00000497960 GJB1P08034 283 aa18.24■□□□□ 0.51
NUP50-219ENST00000497960 CYP2B6P20813 491 aa18.24■□□□□ 0.51
NUP50-219ENST00000497960 PPARAQ07869 468 aa18.24■□□□□ 0.51
NUP50-219ENST00000497960 MCMDC2Q4G0Z9 681 aa18.24■□□□□ 0.51
NUP50-219ENST00000497960 KIAA1755Q5JYT7 1200 aa18.24■□□□□ 0.51
NUP50-219ENST00000497960 WDR78Q5VTH9 848 aa18.24■□□□□ 0.51
NUP50-219ENST00000497960 GPR142Q7Z601 462 aa18.24■□□□□ 0.51
NUP50-219ENST00000497960 GNL3Q9BVP2 549 aaKnown RBP eCLIP18.24■□□□□ 0.51
NUP50-219ENST00000497960 RBBP6Q7Z6E9 1792 aaKnown RBP18.24■□□□□ 0.51
NUP50-219ENST00000497960 CENPFP49454 3210 aa18.23■□□□□ 0.51
NUP50-219ENST00000497960 HMGCRP04035 888 aa18.23■□□□□ 0.51
NUP50-219ENST00000497960 MB21D1Q8N884 522 aa18.23■□□□□ 0.51
NUP50-219ENST00000497960 FAM227BQ96M60 508 aa18.23■□□□□ 0.51
NUP50-219ENST00000497960 UNC93B1Q9H1C4 597 aa18.23■□□□□ 0.51
NUP50-219ENST00000497960 BTBD7Q9P203 1132 aa18.23■□□□□ 0.51
NUP50-219ENST00000497960 NYAP2Q9P242 653 aa18.23■□□□□ 0.51
NUP50-219ENST00000497960 A0A0D9SFI3 127 aa18.22■□□□□ 0.51
NUP50-219ENST00000497960 TSPY3P0CV98 308 aa18.22■□□□□ 0.51
NUP50-219ENST00000497960 TSPY8P0CW00 308 aa18.22■□□□□ 0.51
NUP50-219ENST00000497960 XRCC5P13010 732 aaKnown RBP18.22■□□□□ 0.51
NUP50-219ENST00000497960 PDE4AP27815 886 aa18.22■□□□□ 0.51
NUP50-219ENST00000497960 DSG3P32926 999 aa18.22■□□□□ 0.51
NUP50-219ENST00000497960 RGS2P41220 211 aa18.22■□□□□ 0.51
NUP50-219ENST00000497960 GJA8P48165 433 aa18.22■□□□□ 0.51
NUP50-219ENST00000497960 SAMD1Q6SPF0 538 aaPredicted RBP18.22■□□□□ 0.51
NUP50-219ENST00000497960 IVNS1ABPQ9Y6Y0 642 aa18.22■□□□□ 0.51
NUP50-219ENST00000497960 NMIQ13287 307 aaPredicted RBP18.21■□□□□ 0.51
NUP50-219ENST00000497960 VPS53Q5VIR6 699 aa18.21■□□□□ 0.51
NUP50-219ENST00000497960 TRMT44Q8IYL2 757 aaKnown RBP18.21■□□□□ 0.51
NUP50-219ENST00000497960 CLIP2Q9UDT6 1046 aa18.21■□□□□ 0.51
NUP50-219ENST00000497960 SLC15A5A6NIM6 579 aa18.2■□□□□ 0.5
NUP50-219ENST00000497960 FOXP2O15409 715 aa18.2■□□□□ 0.5
NUP50-219ENST00000497960 SDSP20132 328 aa18.2■□□□□ 0.5
NUP50-219ENST00000497960 MFAP1P55081 439 aaKnown RBP18.2■□□□□ 0.5
NUP50-219ENST00000497960 TFAP4Q01664 338 aa18.2■□□□□ 0.5
NUP50-219ENST00000497960 ALX1Q15699 326 aa18.2■□□□□ 0.5
NUP50-219ENST00000497960 MORN1Q5T089 497 aa18.2■□□□□ 0.5
NUP50-219ENST00000497960 NEDD1Q8NHV4 660 aa18.2■□□□□ 0.5
NUP50-219ENST00000497960 U2AF1L4Q8WU68 220 aaKnown RBP18.2■□□□□ 0.5
NUP50-219ENST00000497960 ATG4CQ96DT6 458 aa18.2■□□□□ 0.5
NUP50-219ENST00000497960 SPATC1LQ9H0A9 340 aa18.2■□□□□ 0.5
NUP50-219ENST00000497960 IGKV6D-41A0A0C4DH26 115 aa18.19■□□□□ 0.5
NUP50-219ENST00000497960 SGPL1O95470 568 aa18.19■□□□□ 0.5
NUP50-219ENST00000497960 TTLL1O95922 423 aa18.19■□□□□ 0.5
NUP50-219ENST00000497960 ZKSCAN1P17029 563 aaPredicted RBP18.19■□□□□ 0.5
NUP50-219ENST00000497960 CAPN2P17655 700 aa18.19■□□□□ 0.5
NUP50-219ENST00000497960 PTPREP23469 700 aa18.19■□□□□ 0.5
NUP50-219ENST00000497960 MAP2K5Q13163 448 aa18.19■□□□□ 0.5
NUP50-219ENST00000497960 PLS1Q14651 629 aa18.19■□□□□ 0.5
NUP50-219ENST00000497960 PPP4R3BQ5MIZ7 849 aa18.19■□□□□ 0.5
NUP50-219ENST00000497960 FAM83BQ5T0W9 1011 aa18.19■□□□□ 0.5
NUP50-219ENST00000497960 TRIB2Q92519 343 aa18.19■□□□□ 0.5
NUP50-219ENST00000497960 USP6NLQ92738 828 aa18.19■□□□□ 0.5
NUP50-219ENST00000497960 CEP95Q96GE4 821 aa18.19■□□□□ 0.5
NUP50-219ENST00000497960 APBA2Q99767 749 aa18.19■□□□□ 0.5
NUP50-219ENST00000497960 MOV10L1Q9BXT6 1211 aaKnown RBP18.19■□□□□ 0.5
NUP50-219ENST00000497960 DIAPH3Q9NSV4 1193 aa18.19■□□□□ 0.5
NUP50-219ENST00000497960 MTMR4Q9NYA4 1195 aa18.19■□□□□ 0.5
NUP50-219ENST00000497960 CCDC171Q6TFL3 1326 aa18.19■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms