RNA–Protein interactions for RNA: ENST00000497758.1

MRPL55-234, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 3

Gene MRPL55, Length 470 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-234ENST00000497758 GTF3C2Q8WUA4 911 aaPredicted RBP13.91□□□□□ -0.18
MRPL55-234ENST00000497758 P2RX7Q99572 595 aaKnown RBP13.91□□□□□ -0.18
MRPL55-234ENST00000497758 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.91□□□□□ -0.18
MRPL55-234ENST00000497758 RNF41Q9H4P4 317 aaPredicted RBP13.91□□□□□ -0.18
MRPL55-234ENST00000497758 VCPKMTQ9H867 229 aa13.91□□□□□ -0.18
MRPL55-234ENST00000497758 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.91□□□□□ -0.18
MRPL55-234ENST00000497758 ORC4O43929 436 aa13.9□□□□□ -0.18
MRPL55-234ENST00000497758 TTLL1O95922 423 aa13.9□□□□□ -0.18
MRPL55-234ENST00000497758 GNRH1P01148 92 aa13.9□□□□□ -0.18
MRPL55-234ENST00000497758 FCGRTP55899 365 aa13.9□□□□□ -0.18
MRPL55-234ENST00000497758 FAM110CQ1W6H9 321 aa13.9□□□□□ -0.18
MRPL55-234ENST00000497758 FBXO46Q6PJ61 603 aaPredicted RBP13.9□□□□□ -0.18
MRPL55-234ENST00000497758 CASC1Q6TDU7 716 aa13.9□□□□□ -0.18
MRPL55-234ENST00000497758 CATSPERGQ6ZRH7 1159 aa13.9□□□□□ -0.18
MRPL55-234ENST00000497758 CEP95Q96GE4 821 aa13.9□□□□□ -0.18
MRPL55-234ENST00000497758 ABHD8Q96I13 439 aa13.9□□□□□ -0.18
MRPL55-234ENST00000497758 INCENPQ9NQS7 918 aa13.9□□□□□ -0.18
MRPL55-234ENST00000497758 NYAP2Q9P242 653 aa13.9□□□□□ -0.18
MRPL55-234ENST00000497758 CLIP2Q9UDT6 1046 aa13.9□□□□□ -0.18
MRPL55-234ENST00000497758 PLIN4Q96Q06 1357 aa13.9□□□□□ -0.18
MRPL55-234ENST00000497758 IGKV6D-41A0A0C4DH26 115 aa13.89□□□□□ -0.19
MRPL55-234ENST00000497758 WDR46O15213 610 aaKnown RBP13.89□□□□□ -0.19
MRPL55-234ENST00000497758 SGSM2O43147 1006 aa13.89□□□□□ -0.19
MRPL55-234ENST00000497758 HOXD10P28358 340 aa13.89□□□□□ -0.19
MRPL55-234ENST00000497758 AKNAD1Q5T1N1 836 aa13.89□□□□□ -0.19
MRPL55-234ENST00000497758 KIAA1211Q6ZU35 1233 aa13.89□□□□□ -0.19
MRPL55-234ENST00000497758 TBC1D10CQ8IV04 446 aa13.89□□□□□ -0.19
MRPL55-234ENST00000497758 CCAR1Q8IX12 1150 aaKnown RBP13.89□□□□□ -0.19
MRPL55-234ENST00000497758 STAG1Q8WVM7 1258 aa13.89□□□□□ -0.19
MRPL55-234ENST00000497758 PAGR1Q9BTK6 254 aa13.89□□□□□ -0.19
MRPL55-234ENST00000497758 ARHGAP39Q9C0H5 1083 aa13.89□□□□□ -0.19
MRPL55-234ENST00000497758 IL25Q9H293 177 aa13.89□□□□□ -0.19
MRPL55-234ENST00000497758 MTMR4Q9NYA4 1195 aa13.89□□□□□ -0.19
MRPL55-234ENST00000497758 HTTP42858 3142 aa13.89□□□□□ -0.19
MRPL55-234ENST00000497758 FGRP09769 529 aa13.88□□□□□ -0.19
MRPL55-234ENST00000497758 KIAA1755Q5JYT7 1200 aa13.88□□□□□ -0.19
MRPL55-234ENST00000497758 GPRC5AQ8NFJ5 357 aa13.88□□□□□ -0.19
MRPL55-234ENST00000497758 TRIM47Q96LD4 638 aa13.88□□□□□ -0.19
MRPL55-234ENST00000497758 STX8Q9UNK0 236 aa13.88□□□□□ -0.19
MRPL55-234ENST00000497758 U3KPZ7 1027 aaPredicted RBP13.88□□□□□ -0.19
MRPL55-234ENST00000497758 TNPO2O14787 897 aaKnown RBP13.87□□□□□ -0.19
MRPL55-234ENST00000497758 CAPN15O75808 1086 aa13.87□□□□□ -0.19
MRPL55-234ENST00000497758 FLOT1O75955 427 aa13.87□□□□□ -0.19
MRPL55-234ENST00000497758 COG2Q14746 738 aa13.87□□□□□ -0.19
MRPL55-234ENST00000497758 SAMD1Q6SPF0 538 aaPredicted RBP13.87□□□□□ -0.19
MRPL55-234ENST00000497758 LRRC47Q8N1G4 583 aaKnown RBP13.87□□□□□ -0.19
MRPL55-234ENST00000497758 ESR2Q92731 530 aa13.87□□□□□ -0.19
MRPL55-234ENST00000497758 NBPF3Q9H094 633 aa13.87□□□□□ -0.19
MRPL55-234ENST00000497758 CWC22Q9HCG8 908 aaKnown RBP13.87□□□□□ -0.19
MRPL55-234ENST00000497758 HOXC10Q9NYD6 342 aa13.87□□□□□ -0.19
MRPL55-234ENST00000497758 MORF4L1Q9UBU8 362 aa13.87□□□□□ -0.19
MRPL55-234ENST00000497758 ISY1Q9ULR0 285 aaKnown RBP13.87□□□□□ -0.19
MRPL55-234ENST00000497758 SYNPO2Q9UMS6 1093 aa13.87□□□□□ -0.19
MRPL55-234ENST00000497758 PTPN22Q9Y2R2 807 aa13.87□□□□□ -0.19
MRPL55-234ENST00000497758 GREB1LQ9C091 1923 aaPredicted RBP13.86□□□□□ -0.19
MRPL55-234ENST00000497758 F5H6K3 240 aa13.86□□□□□ -0.19
MRPL55-234ENST00000497758 NMT2O60551 498 aa13.86□□□□□ -0.19
MRPL55-234ENST00000497758 CDC45O75419 566 aa13.86□□□□□ -0.19
MRPL55-234ENST00000497758 NDUFB10O96000 172 aa13.86□□□□□ -0.19
MRPL55-234ENST00000497758 NT5C2P49902 561 aa13.86□□□□□ -0.19
MRPL55-234ENST00000497758 PRMT2P55345 433 aa13.86□□□□□ -0.19
MRPL55-234ENST00000497758 ERVK-9P63128 1117 aa13.86□□□□□ -0.19
MRPL55-234ENST00000497758 ERVK-24P63145 666 aa13.86□□□□□ -0.19
MRPL55-234ENST00000497758 CCNA1P78396 465 aa13.86□□□□□ -0.19
MRPL55-234ENST00000497758 CAP1Q01518 475 aa13.86□□□□□ -0.19
MRPL55-234ENST00000497758 PTH1RQ03431 593 aa13.86□□□□□ -0.19
MRPL55-234ENST00000497758 KLRC3Q07444 240 aa13.86□□□□□ -0.19
MRPL55-234ENST00000497758 FAM83BQ5T0W9 1011 aa13.86□□□□□ -0.19
MRPL55-234ENST00000497758 MKL1Q969V6 931 aa13.86□□□□□ -0.19
MRPL55-234ENST00000497758 COA7Q96BR5 231 aa13.86□□□□□ -0.19
MRPL55-234ENST00000497758 ESYT1Q9BSJ8 1104 aa13.86□□□□□ -0.19
MRPL55-234ENST00000497758 CNNM2Q9H8M5 875 aa13.86□□□□□ -0.19
MRPL55-234ENST00000497758 SRRDQ9UH36 339 aa13.86□□□□□ -0.19
MRPL55-234ENST00000497758 HPS5Q9UPZ3 1129 aa13.86□□□□□ -0.19
MRPL55-234ENST00000497758 RABGAP1Q9Y3P9 1069 aa13.86□□□□□ -0.19
MRPL55-234ENST00000497758 TACC3Q9Y6A5 838 aa13.86□□□□□ -0.19
MRPL55-234ENST00000497758 NEDD4P46934 1319 aa13.86□□□□□ -0.19
MRPL55-234ENST00000497758 MYPNQ86TC9 1320 aa13.86□□□□□ -0.19
MRPL55-234ENST00000497758 CCDC85CA6NKD9 419 aa13.85□□□□□ -0.19
MRPL55-234ENST00000497758 SPDYE16A6NNV3 312 aaPredicted RBP13.85□□□□□ -0.19
MRPL55-234ENST00000497758 CTGFP29279 349 aa13.85□□□□□ -0.19
MRPL55-234ENST00000497758 LBX2Q6XYB7 198 aa13.85□□□□□ -0.19
MRPL55-234ENST00000497758 MB21D1Q8N884 522 aa13.85□□□□□ -0.19
MRPL55-234ENST00000497758 GMCL1P1Q8NEA9 526 aa13.85□□□□□ -0.19
MRPL55-234ENST00000497758 RAET1EQ8TD07 263 aa13.85□□□□□ -0.19
MRPL55-234ENST00000497758 NUP88Q99567 741 aaPredicted RBP13.85□□□□□ -0.19
MRPL55-234ENST00000497758 KRT23Q9C075 422 aa13.85□□□□□ -0.19
MRPL55-234ENST00000497758 TXNRD2Q9NNW7 524 aa13.85□□□□□ -0.19
MRPL55-234ENST00000497758 IL17RBQ9NRM6 502 aa13.85□□□□□ -0.19
MRPL55-234ENST00000497758 RBPJLQ9UBG7 517 aa13.85□□□□□ -0.19
MRPL55-234ENST00000497758 PEX10O60683 326 aa13.84□□□□□ -0.19
MRPL55-234ENST00000497758 MAPK4P31152 587 aa13.84□□□□□ -0.19
MRPL55-234ENST00000497758 DSG3P32926 999 aa13.84□□□□□ -0.19
MRPL55-234ENST00000497758 TRDNQ13061 729 aa13.84□□□□□ -0.19
MRPL55-234ENST00000497758 SLC9C1Q4G0N8 1177 aa13.84□□□□□ -0.19
MRPL55-234ENST00000497758 SLFN13Q68D06 897 aa13.84□□□□□ -0.19
MRPL55-234ENST00000497758 IQCA1Q86XH1 822 aa13.84□□□□□ -0.19
MRPL55-234ENST00000497758 ANO2Q9NQ90 1003 aa13.84□□□□□ -0.19
MRPL55-234ENST00000497758 TCP11L1Q9NUJ3 509 aa13.84□□□□□ -0.19
MRPL55-234ENST00000497758 PTCH2Q9Y6C5 1203 aa13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms