RNA–Protein interactions for RNA: ENST00000497564.5

VPS26A-209, Transcript of VPS26, retromer complex component A, humanhuman

TSL 5

Gene VPS26A, Length 462 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-209ENST00000497564 CA12O43570 354 aa16.59■□□□□ 0.25
VPS26A-209ENST00000497564 NOVP48745 357 aa16.59■□□□□ 0.25
VPS26A-209ENST00000497564 STK3Q13188 491 aa16.59■□□□□ 0.25
VPS26A-209ENST00000497564 VGLL4Q14135 290 aa16.59■□□□□ 0.25
VPS26A-209ENST00000497564 RCSD1Q6JBY9 416 aa16.59■□□□□ 0.25
VPS26A-209ENST00000497564 NFXL1Q6ZNB6 911 aa16.59■□□□□ 0.25
VPS26A-209ENST00000497564 ZSCAN29Q8IWY8 852 aaPredicted RBP16.59■□□□□ 0.25
VPS26A-209ENST00000497564 ANKRD13AQ8IZ07 590 aa16.59■□□□□ 0.25
VPS26A-209ENST00000497564 CCDC17Q96LX7 622 aa16.59■□□□□ 0.25
VPS26A-209ENST00000497564 DNAJC18Q9H819 358 aa16.59■□□□□ 0.25
VPS26A-209ENST00000497564 IL17RBQ9NRM6 502 aa16.59■□□□□ 0.25
VPS26A-209ENST00000497564 FOXD4L1Q9NU39 408 aa16.59■□□□□ 0.25
VPS26A-209ENST00000497564 ZBTB43O43298 467 aa16.58■□□□□ 0.24
VPS26A-209ENST00000497564 TBC1D12O60347 775 aa16.58■□□□□ 0.24
VPS26A-209ENST00000497564 PPP2R5BQ15173 497 aa16.58■□□□□ 0.24
VPS26A-209ENST00000497564 IFIT1BQ5T764 474 aaKnown RBP16.58■□□□□ 0.24
VPS26A-209ENST00000497564 TATDN1Q6P1N9 297 aa16.58■□□□□ 0.24
VPS26A-209ENST00000497564 SYNE3Q6ZMZ3 975 aa16.58■□□□□ 0.24
VPS26A-209ENST00000497564 CRACR2BQ8N4Y2 399 aaPredicted RBP16.58■□□□□ 0.24
VPS26A-209ENST00000497564 SMARCC2Q8TAQ2 1214 aa16.58■□□□□ 0.24
VPS26A-209ENST00000497564 ZKSCAN4Q969J2 545 aaPredicted RBP16.58■□□□□ 0.24
VPS26A-209ENST00000497564 SMC3Q9UQE7 1217 aa16.58■□□□□ 0.24
VPS26A-209ENST00000497564 SLC12A7Q9Y666 1083 aa16.58■□□□□ 0.24
VPS26A-209ENST00000497564 DOCK1Q14185 1865 aa16.58■□□□□ 0.24
VPS26A-209ENST00000497564 IGKV6D-41A0A0C4DH26 115 aa16.57■□□□□ 0.24
VPS26A-209ENST00000497564 DHX16O60231 1041 aaKnown RBP16.57■□□□□ 0.24
VPS26A-209ENST00000497564 TM4SF4P48230 202 aa16.57■□□□□ 0.24
VPS26A-209ENST00000497564 MAP3K9P80192 1104 aa16.57■□□□□ 0.24
VPS26A-209ENST00000497564 MAP3K10Q02779 954 aa16.57■□□□□ 0.24
VPS26A-209ENST00000497564 ZNF654Q8IZM8 581 aa16.57■□□□□ 0.24
VPS26A-209ENST00000497564 WRNIP1Q96S55 665 aa16.57■□□□□ 0.24
VPS26A-209ENST00000497564 R3HDMLQ9H3Y0 253 aa16.57■□□□□ 0.24
VPS26A-209ENST00000497564 SNCAIPQ9Y6H5 919 aa16.57■□□□□ 0.24
VPS26A-209ENST00000497564 TCHHQ07283 1943 aa16.57■□□□□ 0.24
VPS26A-209ENST00000497564 NMT2O60551 498 aa16.56■□□□□ 0.24
VPS26A-209ENST00000497564 DDAH1O94760 285 aa16.56■□□□□ 0.24
VPS26A-209ENST00000497564 CALM1P0DP23 149 aa16.56■□□□□ 0.24
VPS26A-209ENST00000497564 CALM2P0DP24 149 aa16.56■□□□□ 0.24
VPS26A-209ENST00000497564 CALM3P0DP25 149 aa16.56■□□□□ 0.24
VPS26A-209ENST00000497564 INPP5BP32019 993 aa16.56■□□□□ 0.24
VPS26A-209ENST00000497564 METAP2P50579 478 aaKnown RBP eCLIP16.56■□□□□ 0.24
VPS26A-209ENST00000497564 PPP4R3BQ5MIZ7 849 aa16.56■□□□□ 0.24
VPS26A-209ENST00000497564 NSUN7Q8NE18 718 aaKnown RBP16.56■□□□□ 0.24
VPS26A-209ENST00000497564 OPTNQ96CV9 577 aa16.56■□□□□ 0.24
VPS26A-209ENST00000497564 MAP3K14Q99558 947 aa16.56■□□□□ 0.24
VPS26A-209ENST00000497564 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.56■□□□□ 0.24
VPS26A-209ENST00000497564 TRIM34Q9BYJ4 488 aa16.56■□□□□ 0.24
VPS26A-209ENST00000497564 SAGE1Q9NXZ1 904 aa16.56■□□□□ 0.24
VPS26A-209ENST00000497564 NAP1L2Q9ULW6 460 aaPredicted RBP16.56■□□□□ 0.24
VPS26A-209ENST00000497564 UNCXA6NJT0 531 aa16.55■□□□□ 0.24
VPS26A-209ENST00000497564 GOLGA8AA7E2F4 631 aa16.55■□□□□ 0.24
VPS26A-209ENST00000497564 IGF2BP3O00425 579 aaKnown RBP eCLIP16.55■□□□□ 0.24
VPS26A-209ENST00000497564 CTDNEP1O95476 244 aa16.55■□□□□ 0.24
VPS26A-209ENST00000497564 ZBTB48P10074 688 aaPredicted RBP16.55■□□□□ 0.24
VPS26A-209ENST00000497564 PDIA4P13667 645 aaKnown RBP16.55■□□□□ 0.24
VPS26A-209ENST00000497564 AKR1B1P15121 316 aa16.55■□□□□ 0.24
VPS26A-209ENST00000497564 GJB2P29033 226 aa16.55■□□□□ 0.24
VPS26A-209ENST00000497564 CCT2P78371 535 aaKnown RBP16.55■□□□□ 0.24
VPS26A-209ENST00000497564 NUCB2P80303 420 aa16.55■□□□□ 0.24
VPS26A-209ENST00000497564 HMGN5P82970 282 aaKnown RBP16.55■□□□□ 0.24
VPS26A-209ENST00000497564 TROAPQ12815 778 aa16.55■□□□□ 0.24
VPS26A-209ENST00000497564 CATIPQ7Z7H3 387 aa16.55■□□□□ 0.24
VPS26A-209ENST00000497564 NCOA5Q9HCD5 579 aaKnown RBP16.55■□□□□ 0.24
VPS26A-209ENST00000497564 CCDC196A0A1B0GTZ2 297 aa16.54■□□□□ 0.24
VPS26A-209ENST00000497564 TBC1D8O95759 1140 aa16.54■□□□□ 0.24
VPS26A-209ENST00000497564 CERKLQ49MI3 558 aaPredicted RBP16.54■□□□□ 0.24
VPS26A-209ENST00000497564 MICU3Q86XE3 530 aa16.54■□□□□ 0.24
VPS26A-209ENST00000497564 REM2Q8IYK8 340 aaPredicted RBP16.54■□□□□ 0.24
VPS26A-209ENST00000497564 OTUD5Q96G74 571 aa16.54■□□□□ 0.24
VPS26A-209ENST00000497564 CEP95Q96GE4 821 aa16.54■□□□□ 0.24
VPS26A-209ENST00000497564 PTPN18Q99952 460 aa16.54■□□□□ 0.24
VPS26A-209ENST00000497564 ZNF341Q9BYN7 854 aa16.54■□□□□ 0.24
VPS26A-209ENST00000497564 FAM217BQ9NTX9 383 aaPredicted RBP16.54■□□□□ 0.24
VPS26A-209ENST00000497564 MTMR4Q9NYA4 1195 aa16.54■□□□□ 0.24
VPS26A-209ENST00000497564 CSADQ9Y600 493 aa16.54■□□□□ 0.24
VPS26A-209ENST00000497564 BAZ2BQ9UIF8 2168 aaKnown RBP16.53■□□□□ 0.24
VPS26A-209ENST00000497564 MANSC4A6NHS7 340 aaPredicted RBP16.53■□□□□ 0.24
VPS26A-209ENST00000497564 CDKL5O76039 1030 aa16.53■□□□□ 0.24
VPS26A-209ENST00000497564 SREBF2Q12772 1141 aa16.53■□□□□ 0.24
VPS26A-209ENST00000497564 RAB3GAP1Q15042 981 aa16.53■□□□□ 0.24
VPS26A-209ENST00000497564 NTRK3Q16288 839 aa16.53■□□□□ 0.24
VPS26A-209ENST00000497564 RTN1Q16799 776 aa16.53■□□□□ 0.24
VPS26A-209ENST00000497564 DCAF15Q66K64 600 aa16.53■□□□□ 0.24
VPS26A-209ENST00000497564 CPLX2Q6PUV4 134 aaKnown RBP16.53■□□□□ 0.24
VPS26A-209ENST00000497564 FANCBQ8NB91 859 aa16.53■□□□□ 0.24
VPS26A-209ENST00000497564 MS4A4AQ96JQ5 239 aa16.53■□□□□ 0.24
VPS26A-209ENST00000497564 KAT14Q9H8E8 782 aa16.53■□□□□ 0.24
VPS26A-209ENST00000497564 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.53■□□□□ 0.24
VPS26A-209ENST00000497564 RBM28Q9NW13 759 aaKnown RBP16.53■□□□□ 0.24
VPS26A-209ENST00000497564 ZNF112Q9UJU3 913 aa16.53■□□□□ 0.24
VPS26A-209ENST00000497564 PHIPQ8WWQ0 1821 aa16.53■□□□□ 0.24
VPS26A-209ENST00000497564 HTTP42858 3142 aa16.53■□□□□ 0.24
VPS26A-209ENST00000497564 PTPDC1A2A3K4 754 aa16.52■□□□□ 0.24
VPS26A-209ENST00000497564 SPDYE5A6NIY4 337 aa16.52■□□□□ 0.24
VPS26A-209ENST00000497564 FAM196BA6NMK8 535 aa16.52■□□□□ 0.24
VPS26A-209ENST00000497564 CPLX1O14810 134 aa16.52■□□□□ 0.24
VPS26A-209ENST00000497564 JAK2O60674 1132 aa16.52■□□□□ 0.24
VPS26A-209ENST00000497564 CAPN15O75808 1086 aa16.52■□□□□ 0.24
VPS26A-209ENST00000497564 TOP1P11387 765 aaKnown RBP16.52■□□□□ 0.24
VPS26A-209ENST00000497564 PDCP20941 246 aa16.52■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms