RNA–Protein interactions for RNA: ENST00000497448.1

TOM1-217, Transcript of target of myb1 membrane trafficking protein, humanhuman

TSL 2

Gene TOM1, Length 438 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1-217ENST00000497448 FAAP100Q0VG06 881 aa12.88□□□□□ -0.35
TOM1-217ENST00000497448 MVPQ14764 893 aaKnown RBP12.88□□□□□ -0.35
TOM1-217ENST00000497448 RASIP1Q5U651 963 aa12.88□□□□□ -0.35
TOM1-217ENST00000497448 TGFBRAP1Q8WUH2 860 aa12.88□□□□□ -0.35
TOM1-217ENST00000497448 MOV10L1Q9BXT6 1211 aaKnown RBP12.88□□□□□ -0.35
TOM1-217ENST00000497448 XPNPEP3Q9NQH7 507 aa12.88□□□□□ -0.35
TOM1-217ENST00000497448 AATFQ9NY61 560 aaKnown RBP eCLIP12.88□□□□□ -0.35
TOM1-217ENST00000497448 PALD1Q9ULE6 856 aa12.88□□□□□ -0.35
TOM1-217ENST00000497448 TFF2Q03403 129 aa12.87□□□□□ -0.35
TOM1-217ENST00000497448 TMEM240Q5SV17 173 aa12.87□□□□□ -0.35
TOM1-217ENST00000497448 FOXP4Q8IVH2 680 aaPredicted RBP12.87□□□□□ -0.35
TOM1-217ENST00000497448 SPATA5Q8NB90 893 aa12.87□□□□□ -0.35
TOM1-217ENST00000497448 SLC44A5Q8NCS7 719 aa12.87□□□□□ -0.35
TOM1-217ENST00000497448 EPHX3Q9H6B9 360 aa12.87□□□□□ -0.35
TOM1-217ENST00000497448 ZNFX1Q9P2E3 1918 aaKnown RBP12.87□□□□□ -0.35
TOM1-217ENST00000497448 PGK1P00558 417 aa12.86□□□□□ -0.35
TOM1-217ENST00000497448 RARBP10826 455 aa12.86□□□□□ -0.35
TOM1-217ENST00000497448 KCNQ1P51787 676 aa12.86□□□□□ -0.35
TOM1-217ENST00000497448 USP14P54578 494 aa12.86□□□□□ -0.35
TOM1-217ENST00000497448 C16orf59Q7L2K0 433 aa12.86□□□□□ -0.35
TOM1-217ENST00000497448 ANKRD33Q7Z3H0 272 aa12.86□□□□□ -0.35
TOM1-217ENST00000497448 ACER1Q8TDN7 264 aa12.86□□□□□ -0.35
TOM1-217ENST00000497448 MAML3Q96JK9 1138 aa12.86□□□□□ -0.35
TOM1-217ENST00000497448 NOL10Q9BSC4 688 aaKnown RBP12.86□□□□□ -0.35
TOM1-217ENST00000497448 KIAA1683Q9H0B3 1180 aa12.86□□□□□ -0.35
TOM1-217ENST00000497448 RPAP3Q9H6T3 665 aaPredicted RBP12.86□□□□□ -0.35
TOM1-217ENST00000497448 COPRSQ9NQ92 184 aa12.86□□□□□ -0.35
TOM1-217ENST00000497448 SAP30BPQ9UHR5 308 aaKnown RBP12.86□□□□□ -0.35
TOM1-217ENST00000497448 TBX21Q9UL17 535 aa12.86□□□□□ -0.35
TOM1-217ENST00000497448 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP12.86□□□□□ -0.35
TOM1-217ENST00000497448 COL11A1P12107 1806 aaPredicted RBP12.85□□□□□ -0.35
TOM1-217ENST00000497448 STRNO43815 780 aa12.85□□□□□ -0.35
TOM1-217ENST00000497448 TIMP1P01033 207 aa12.85□□□□□ -0.35
TOM1-217ENST00000497448 HLA-DOAP06340 250 aa12.85□□□□□ -0.35
TOM1-217ENST00000497448 UBTFL1P0CB47 393 aaPredicted RBP12.85□□□□□ -0.35
TOM1-217ENST00000497448 ERCC3P19447 782 aa12.85□□□□□ -0.35
TOM1-217ENST00000497448 ARID4AP29374 1257 aaPredicted RBP12.85□□□□□ -0.35
TOM1-217ENST00000497448 PPIGQ13427 754 aaKnown RBP eCLIP12.85□□□□□ -0.351e-7■■□□□ 12.5
TOM1-217ENST00000497448 TMEM31Q5JXX7 168 aa12.85□□□□□ -0.35
TOM1-217ENST00000497448 MFSD5Q6N075 450 aa12.85□□□□□ -0.35
TOM1-217ENST00000497448 ADGRA1Q86SQ6 560 aa12.85□□□□□ -0.35
TOM1-217ENST00000497448 RNF180Q86T96 592 aa12.85□□□□□ -0.35
TOM1-217ENST00000497448 SHCBP1Q8NEM2 672 aa12.85□□□□□ -0.35
TOM1-217ENST00000497448 LENG1Q96BZ8 264 aaPredicted RBP12.85□□□□□ -0.35
TOM1-217ENST00000497448 TOX2Q96NM4 488 aa12.85□□□□□ -0.35
TOM1-217ENST00000497448 SPATC1LQ9H0A9 340 aa12.85□□□□□ -0.35
TOM1-217ENST00000497448 TSPYL2Q9H2G4 693 aaPredicted RBP12.85□□□□□ -0.35
TOM1-217ENST00000497448 NKX2-4Q9H2Z4 354 aa12.85□□□□□ -0.35
TOM1-217ENST00000497448 PIEZO1Q92508 2521 aa12.84□□□□□ -0.35
TOM1-217ENST00000497448 DCDC2CA8MYV0 355 aa12.84□□□□□ -0.35
TOM1-217ENST00000497448 CCER2I3L3R5 266 aa12.84□□□□□ -0.35
TOM1-217ENST00000497448 ADAMTS4O75173 837 aa12.84□□□□□ -0.35
TOM1-217ENST00000497448 PLCG2P16885 1265 aa12.84□□□□□ -0.35
TOM1-217ENST00000497448 MCAMP43121 646 aa12.84□□□□□ -0.35
TOM1-217ENST00000497448 TFCP2Q12800 502 aa12.84□□□□□ -0.35
TOM1-217ENST00000497448 RAB3GAP1Q15042 981 aa12.84□□□□□ -0.35
TOM1-217ENST00000497448 RAB30Q15771 203 aa12.84□□□□□ -0.35
TOM1-217ENST00000497448 ALYREFQ86V81 257 aaKnown RBP12.84□□□□□ -0.35
TOM1-217ENST00000497448 MICALL1Q8N3F8 863 aa12.84□□□□□ -0.35
TOM1-217ENST00000497448 C11orf16Q9NQ32 467 aa12.84□□□□□ -0.35
TOM1-217ENST00000497448 STARD7Q9NQZ5 370 aa12.84□□□□□ -0.35
TOM1-217ENST00000497448 SLC5A4Q9NY91 659 aa12.84□□□□□ -0.35
TOM1-217ENST00000497448 YBX2Q9Y2T7 364 aaKnown RBP12.84□□□□□ -0.35
TOM1-217ENST00000497448 TRANK1O15050 2925 aa12.84□□□□□ -0.35
TOM1-217ENST00000497448 BAG3O95817 575 aa12.83□□□□□ -0.36
TOM1-217ENST00000497448 ACRP10323 421 aa12.83□□□□□ -0.36
TOM1-217ENST00000497448 CSF2RAP15509 400 aa12.83□□□□□ -0.36
TOM1-217ENST00000497448 PPP4CP60510 307 aa12.83□□□□□ -0.36
TOM1-217ENST00000497448 NAA16Q6N069 864 aaPredicted RBP12.83□□□□□ -0.36
TOM1-217ENST00000497448 TATDN1Q6P1N9 297 aa12.83□□□□□ -0.36
TOM1-217ENST00000497448 PSRC1Q6PGN9 363 aaPredicted RBP12.83□□□□□ -0.36
TOM1-217ENST00000497448 CCDC174Q6PII3 467 aa12.83□□□□□ -0.36
TOM1-217ENST00000497448 ABRAQ8N0Z2 381 aa12.83□□□□□ -0.36
TOM1-217ENST00000497448 LRP2BPQ9P2M1 347 aa12.83□□□□□ -0.36
TOM1-217ENST00000497448 NRBP1Q9UHY1 535 aa12.83□□□□□ -0.36
TOM1-217ENST00000497448 MSRAQ9UJ68 235 aa12.83□□□□□ -0.36
TOM1-217ENST00000497448 AKAP2Q9Y2D5 859 aa12.83□□□□□ -0.36
TOM1-217ENST00000497448 MUC6Q6W4X9 2439 aa12.83□□□□□ -0.36
TOM1-217ENST00000497448 NAV1Q8NEY1 1877 aa12.82□□□□□ -0.36
TOM1-217ENST00000497448 FAM86C2PA6NEL3 165 aa12.82□□□□□ -0.36
TOM1-217ENST00000497448 ACLYP53396 1101 aa12.82□□□□□ -0.36
TOM1-217ENST00000497448 AAK1Q2M2I8 961 aa12.82□□□□□ -0.36
TOM1-217ENST00000497448 ATF7IPQ6VMQ6 1270 aa12.82□□□□□ -0.36
TOM1-217ENST00000497448 ZNF365Q70YC5 407 aa12.82□□□□□ -0.36
TOM1-217ENST00000497448 NEUROD6Q96NK8 337 aa12.82□□□□□ -0.36
TOM1-217ENST00000497448 ERC2O15083 957 aa12.81□□□□□ -0.36
TOM1-217ENST00000497448 TAL1P17542 331 aaPredicted RBP12.81□□□□□ -0.36
TOM1-217ENST00000497448 NCAPG2Q86XI2 1143 aa12.81□□□□□ -0.36
TOM1-217ENST00000497448 SSH1Q8WYL5 1049 aa12.81□□□□□ -0.36
TOM1-217ENST00000497448 KHSRPQ92945 711 aaKnown RBP eCLIP12.81□□□□□ -0.36
TOM1-217ENST00000497448 SNX27Q96L92 541 aa12.81□□□□□ -0.36
TOM1-217ENST00000497448 YTHDC1Q96MU7 727 aaKnown RBP12.81□□□□□ -0.36
TOM1-217ENST00000497448 SLC28A3Q9HAS3 691 aa12.81□□□□□ -0.36
TOM1-217ENST00000497448 SYNRGQ9UMZ2 1314 aa12.81□□□□□ -0.36
TOM1-217ENST00000497448 APBB1O00213 710 aa12.8□□□□□ -0.36
TOM1-217ENST00000497448 ZNF865P0CJ78 1059 aaPredicted RBP12.8□□□□□ -0.36
TOM1-217ENST00000497448 AKR1A1P14550 325 aa12.8□□□□□ -0.36
TOM1-217ENST00000497448 GUCY1A2P33402 732 aa12.8□□□□□ -0.36
TOM1-217ENST00000497448 COG2Q14746 738 aa12.8□□□□□ -0.36
TOM1-217ENST00000497448 SKIV2LQ15477 1246 aaKnown RBP12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms