RNA–Protein interactions for RNA: ENST00000497289.5

RPN1-207, Transcript of ribophorin I, humanhuman

TSL 2 BASIC

Gene RPN1, Length 2,137 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPN1-207ENST00000497289 RNF214Q8ND24 703 aa18.2■□□□□ 0.5
RPN1-207ENST00000497289 ENGASEQ8NFI3 743 aa18.2■□□□□ 0.5
RPN1-207ENST00000497289 OXER1Q8TDS5 423 aa18.2■□□□□ 0.5
RPN1-207ENST00000497289 PIM2Q9P1W9 311 aa18.2■□□□□ 0.5
RPN1-207ENST00000497289 PCDHAC2Q9Y5I4 1007 aa18.2■□□□□ 0.5
RPN1-207ENST00000497289 COL4A5P29400 1685 aa18.2■□□□□ 0.5
RPN1-207ENST00000497289 PALM3A6NDB9 673 aaPredicted RBP18.19■□□□□ 0.5
RPN1-207ENST00000497289 KINO60870 393 aaKnown RBP18.19■□□□□ 0.5
RPN1-207ENST00000497289 AKR1B1P15121 316 aa18.19■□□□□ 0.5
RPN1-207ENST00000497289 SHMT1P34896 483 aa18.19■□□□□ 0.5
RPN1-207ENST00000497289 CCDC173Q0VFZ6 552 aa18.19■□□□□ 0.5
RPN1-207ENST00000497289 SNW1Q13573 536 aaKnown RBP18.19■□□□□ 0.5
RPN1-207ENST00000497289 CFAP100Q494V2 611 aa18.19■□□□□ 0.5
RPN1-207ENST00000497289 RSBN1LQ6PCB5 846 aaPredicted RBP18.19■□□□□ 0.5
RPN1-207ENST00000497289 ZNF277Q9NRM2 450 aaPredicted RBP18.19■□□□□ 0.5
RPN1-207ENST00000497289 IGKV6D-41A0A0C4DH26 115 aa18.18■□□□□ 0.5
RPN1-207ENST00000497289 PARP1P09874 1014 aaKnown RBP18.18■□□□□ 0.5
RPN1-207ENST00000497289 CACNB3P54284 484 aa18.18■□□□□ 0.5
RPN1-207ENST00000497289 SH3GLB2Q9NR46 395 aa18.18■□□□□ 0.5
RPN1-207ENST00000497289 MTMR4Q9NYA4 1195 aa18.18■□□□□ 0.5
RPN1-207ENST00000497289 FAM198AQ9UFP1 575 aa18.18■□□□□ 0.5
RPN1-207ENST00000497289 MTMR7Q9Y216 660 aa18.18■□□□□ 0.5
RPN1-207ENST00000497289 ATF5Q9Y2D1 282 aaPredicted RBP18.18■□□□□ 0.5
RPN1-207ENST00000497289 COL2A1P02458 1487 aaPredicted RBP18.18■□□□□ 0.5
RPN1-207ENST00000497289 MARCKSP29966 332 aaPredicted RBP18.17■□□□□ 0.5
RPN1-207ENST00000497289 TOB1P50616 345 aaPredicted RBP18.17■□□□□ 0.5
RPN1-207ENST00000497289 AXDND1Q5T1B0 1012 aaPredicted RBP18.17■□□□□ 0.5
RPN1-207ENST00000497289 CKAP2LQ8IYA6 745 aa18.17■□□□□ 0.5
RPN1-207ENST00000497289 EIF4ENIF1Q9NRA8 985 aaKnown RBP18.17■□□□□ 0.5
RPN1-207ENST00000497289 CEP131Q9UPN4 1083 aa18.17■□□□□ 0.5
RPN1-207ENST00000497289 A0A1B0GVL5 298 aa18.17■□□□□ 0.5
RPN1-207ENST00000497289 CMA1P23946 247 aa18.17■□□□□ 0.5
RPN1-207ENST00000497289 NLRP5P59047 1200 aa18.17■□□□□ 0.5
RPN1-207ENST00000497289 TCP10Q12799 353 aa18.17■□□□□ 0.5
RPN1-207ENST00000497289 UVSSAQ2YD98 709 aa18.17■□□□□ 0.5
RPN1-207ENST00000497289 PPP4R3BQ5MIZ7 849 aa18.17■□□□□ 0.5
RPN1-207ENST00000497289 FMR1NBQ8N0W7 255 aaPredicted RBP18.17■□□□□ 0.5
RPN1-207ENST00000497289 PIBF1Q8WXW3 757 aa18.17■□□□□ 0.5
RPN1-207ENST00000497289 SPZ1Q9BXG8 430 aa18.17■□□□□ 0.5
RPN1-207ENST00000497289 CABP5Q9NP86 173 aa18.17■□□□□ 0.5
RPN1-207ENST00000497289 CUTAO60888 179 aa18.16■□□□□ 0.5
RPN1-207ENST00000497289 TYRO3Q06418 890 aa18.16■□□□□ 0.5
RPN1-207ENST00000497289 ZFPM1Q8IX07 1006 aa18.16■□□□□ 0.5
RPN1-207ENST00000497289 NIM1KQ8IY84 436 aa18.16■□□□□ 0.5
RPN1-207ENST00000497289 CCDC17Q96LX7 622 aa18.16■□□□□ 0.5
RPN1-207ENST00000497289 PI4KBQ9UBF8 816 aa18.16■□□□□ 0.5
RPN1-207ENST00000497289 HDAC9Q9UKV0 1011 aa18.16■□□□□ 0.5
RPN1-207ENST00000497289 NOL7Q9UMY1 257 aaKnown RBP18.16■□□□□ 0.5
RPN1-207ENST00000497289 KLRF2D3W0D1 207 aa18.16■□□□□ 0.5
RPN1-207ENST00000497289 PSMD14O00487 310 aa18.16■□□□□ 0.5
RPN1-207ENST00000497289 ENTPD3O75355 529 aa18.16■□□□□ 0.5
RPN1-207ENST00000497289 VIL1P09327 827 aaKnown RBP18.16■□□□□ 0.5
RPN1-207ENST00000497289 CALML3P27482 149 aa18.16■□□□□ 0.5
RPN1-207ENST00000497289 SMARCA1P28370 1054 aa18.16■□□□□ 0.5
RPN1-207ENST00000497289 DALRD3Q5D0E6 543 aaKnown RBP18.16■□□□□ 0.5
RPN1-207ENST00000497289 SASS6Q6UVJ0 657 aa18.16■□□□□ 0.5
RPN1-207ENST00000497289 ZSCAN29Q8IWY8 852 aaPredicted RBP18.16■□□□□ 0.5
RPN1-207ENST00000497289 TRIM34Q9BYJ4 488 aa18.16■□□□□ 0.5
RPN1-207ENST00000497289 TDRD3Q9H7E2 651 aaKnown RBP18.16■□□□□ 0.5
RPN1-207ENST00000497289 ARFGEF1Q9Y6D6 1849 aa18.15■□□□□ 0.5
RPN1-207ENST00000497289 RAD17O75943 681 aa18.15■□□□□ 0.5
RPN1-207ENST00000497289 TTLL1O95922 423 aa18.15■□□□□ 0.5
RPN1-207ENST00000497289 GOLGA8HP0CJ92 632 aa18.15■□□□□ 0.5
RPN1-207ENST00000497289 NDUFA8P51970 172 aa18.15■□□□□ 0.5
RPN1-207ENST00000497289 NPY5RQ15761 445 aa18.15■□□□□ 0.5
RPN1-207ENST00000497289 FAM177A1Q8N128 213 aaPredicted RBP18.15■□□□□ 0.5
RPN1-207ENST00000497289 CCDC148Q8NFR7 591 aa18.15■□□□□ 0.5
RPN1-207ENST00000497289 TNFRSF25Q93038 417 aa18.15■□□□□ 0.5
RPN1-207ENST00000497289 PPP1R9BQ96SB3 815 aa18.15■□□□□ 0.5
RPN1-207ENST00000497289 DDTLA6NHG4 134 aaPredicted RBP18.14■□□□□ 0.5
RPN1-207ENST00000497289 KRI1Q8N9T8 703 aaKnown RBP18.14■□□□□ 0.5
RPN1-207ENST00000497289 TMOD2Q9NZR1 351 aa18.14■□□□□ 0.5
RPN1-207ENST00000497289 ZNRF3Q9ULT6 936 aa18.14■□□□□ 0.5
RPN1-207ENST00000497289 ATRNL1Q5VV63 1379 aa18.14■□□□□ 0.49
RPN1-207ENST00000497289 MPHOSPH10O00566 681 aaKnown RBP18.14■□□□□ 0.49
RPN1-207ENST00000497289 CYTH3O43739 400 aa18.14■□□□□ 0.49
RPN1-207ENST00000497289 PFKFB1P16118 471 aa18.14■□□□□ 0.49
RPN1-207ENST00000497289 PRMT6Q96LA8 375 aaPredicted RBP18.14■□□□□ 0.49
RPN1-207ENST00000497289 DNAJC18Q9H819 358 aa18.14■□□□□ 0.49
RPN1-207ENST00000497289 PCDHB6Q9Y5E3 794 aa18.14■□□□□ 0.49
RPN1-207ENST00000497289 MRVI1Q9Y6F6 885 aa18.14■□□□□ 0.49
RPN1-207ENST00000497289 SLC35G1Q2M3R5 365 aa18.13■□□□□ 0.49
RPN1-207ENST00000497289 ASPRV1Q53RT3 343 aa18.13■□□□□ 0.49
RPN1-207ENST00000497289 USP17L2Q6R6M4 530 aa18.13■□□□□ 0.49
RPN1-207ENST00000497289 SH3BP5LQ7L8J4 393 aa18.13■□□□□ 0.49
RPN1-207ENST00000497289 RASGRP2Q7LDG7 609 aa18.13■□□□□ 0.49
RPN1-207ENST00000497289 FOXP4Q8IVH2 680 aaPredicted RBP18.13■□□□□ 0.49
RPN1-207ENST00000497289 LRRC47Q8N1G4 583 aaKnown RBP18.13■□□□□ 0.49
RPN1-207ENST00000497289 GPKOWQ92917 476 aaPredicted RBP eCLIP18.13■□□□□ 0.491e-6■■■□□ 15
RPN1-207ENST00000497289 GMLQ99445 158 aa18.13■□□□□ 0.49
RPN1-207ENST00000497289 CLIP2Q9UDT6 1046 aa18.13■□□□□ 0.49
RPN1-207ENST00000497289 MORC2Q9Y6X9 1032 aaPredicted RBP18.13■□□□□ 0.49
RPN1-207ENST00000497289 FAM205CA6NFA0 338 aa18.13■□□□□ 0.49
RPN1-207ENST00000497289 TRIM75PA6NK02 468 aa18.13■□□□□ 0.49
RPN1-207ENST00000497289 USP17L5A8MUK1 530 aa18.13■□□□□ 0.49
RPN1-207ENST00000497289 PDHBP11177 359 aa18.13■□□□□ 0.49
RPN1-207ENST00000497289 RESP18Q5W5W9 173 aa18.13■□□□□ 0.49
RPN1-207ENST00000497289 OGFOD1Q8N543 542 aa18.13■□□□□ 0.49
RPN1-207ENST00000497289 RRP36Q96EU6 259 aaKnown RBP18.13■□□□□ 0.49
RPN1-207ENST00000497289 FAM237AA0A1B0GTK4 181 aa18.12■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms