RNA–Protein interactions for RNA: ENST00000497203.1

SMC4-225, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 490 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-225ENST00000497203 CDKAL1Q5VV42 579 aa6.25□□□□□ -1.41
SMC4-225ENST00000497203 OVOS1Q6IE37 1185 aa6.25□□□□□ -1.41
SMC4-225ENST00000497203 TP53INP2Q8IXH6 220 aa6.25□□□□□ -1.41
SMC4-225ENST00000497203 PHACTR4Q8IZ21 702 aa6.25□□□□□ -1.41
SMC4-225ENST00000497203 ARMC5Q96C12 935 aa6.25□□□□□ -1.41
SMC4-225ENST00000497203 CCDC74BQ96LY2 380 aa6.25□□□□□ -1.41
SMC4-225ENST00000497203 GMIPQ9P107 970 aa6.25□□□□□ -1.41
SMC4-225ENST00000497203 SNX11Q9Y5W9 270 aa6.25□□□□□ -1.41
SMC4-225ENST00000497203 PITPNM2Q9BZ72 1349 aa6.25□□□□□ -1.41
SMC4-225ENST00000497203 CLCN7P51798 805 aa6.24□□□□□ -1.41
SMC4-225ENST00000497203 TNK2Q07912 1038 aa6.24□□□□□ -1.41
SMC4-225ENST00000497203 COL9A2Q14055 689 aaPredicted RBP6.24□□□□□ -1.41
SMC4-225ENST00000497203 MLECQ14165 292 aa6.24□□□□□ -1.41
SMC4-225ENST00000497203 SEC16BQ96JE7 1060 aa6.24□□□□□ -1.41
SMC4-225ENST00000497203 Q96M66 194 aa6.24□□□□□ -1.41
SMC4-225ENST00000497203 HSPA12BQ96MM6 686 aa6.24□□□□□ -1.41
SMC4-225ENST00000497203 PPP1R1BQ9UD71 204 aaPredicted RBP6.24□□□□□ -1.41
SMC4-225ENST00000497203 ST14Q9Y5Y6 855 aa6.24□□□□□ -1.41
SMC4-225ENST00000497203 RGS13O14921 159 aa6.23□□□□□ -1.41
SMC4-225ENST00000497203 UBOX5O94941 541 aa6.23□□□□□ -1.41
SMC4-225ENST00000497203 RAG1P15918 1043 aa6.23□□□□□ -1.41
SMC4-225ENST00000497203 POLR2BP30876 1174 aaKnown RBP6.23□□□□□ -1.41
SMC4-225ENST00000497203 KIR3DL1P43629 444 aa6.23□□□□□ -1.41
SMC4-225ENST00000497203 CDCP2Q5VXM1 449 aa6.23□□□□□ -1.41
SMC4-225ENST00000497203 TMEM40Q8WWA1 233 aa6.23□□□□□ -1.41
SMC4-225ENST00000497203 ATG4CQ96DT6 458 aa6.23□□□□□ -1.41
SMC4-225ENST00000497203 COX4I2Q96KJ9 171 aa6.23□□□□□ -1.41
SMC4-225ENST00000497203 KREMEN1Q96MU8 473 aa6.23□□□□□ -1.41
SMC4-225ENST00000497203 CNNM2Q9H8M5 875 aa6.23□□□□□ -1.41
SMC4-225ENST00000497203 SEMA3GQ9NS98 782 aa6.23□□□□□ -1.41
SMC4-225ENST00000497203 H3BS24 57 aa6.22□□□□□ -1.41
SMC4-225ENST00000497203 LRRN2O75325 713 aa6.22□□□□□ -1.41
SMC4-225ENST00000497203 ATF4P18848 351 aaPredicted RBP6.22□□□□□ -1.41
SMC4-225ENST00000497203 NLRC3Q7RTR2 1065 aa6.22□□□□□ -1.41
SMC4-225ENST00000497203 AGBL5Q8NDL9 886 aa6.22□□□□□ -1.41
SMC4-225ENST00000497203 RNF141Q8WVD5 230 aa6.22□□□□□ -1.41
SMC4-225ENST00000497203 ATP13A1Q9HD20 1204 aa6.22□□□□□ -1.41
SMC4-225ENST00000497203 GINM1Q9NU53 330 aa6.22□□□□□ -1.41
SMC4-225ENST00000497203 ZNRF3Q9ULT6 936 aa6.22□□□□□ -1.41
SMC4-225ENST00000497203 PPT2Q9UMR5 302 aa6.22□□□□□ -1.41
SMC4-225ENST00000497203 MEIS3P2A8K0S8 358 aa6.21□□□□□ -1.42
SMC4-225ENST00000497203 NME1P15531 152 aaKnown RBP6.21□□□□□ -1.42
SMC4-225ENST00000497203 FUT4P22083 530 aa6.21□□□□□ -1.42
SMC4-225ENST00000497203 GBP1P32455 592 aa6.21□□□□□ -1.42
SMC4-225ENST00000497203 IKZF1Q13422 519 aa6.21□□□□□ -1.42
SMC4-225ENST00000497203 PLCL1Q15111 1095 aa6.21□□□□□ -1.42
SMC4-225ENST00000497203 LRRFIP1Q32MZ4 808 aaKnown RBP6.21□□□□□ -1.42
SMC4-225ENST00000497203 DTWD2Q8NBA8 298 aa6.21□□□□□ -1.42
SMC4-225ENST00000497203 PIWIL2Q8TC59 973 aaKnown RBP6.21□□□□□ -1.42
SMC4-225ENST00000497203 ASB11Q8WXH4 323 aa6.21□□□□□ -1.42
SMC4-225ENST00000497203 BUD13Q9BRD0 619 aaKnown RBP eCLIP6.21□□□□□ -1.42
SMC4-225ENST00000497203 ADAMTS6Q9UKP5 1117 aa6.21□□□□□ -1.42
SMC4-225ENST00000497203 STRIP2Q9ULQ0 834 aa6.21□□□□□ -1.42
SMC4-225ENST00000497203 WASH4PA8MWX3 477 aa6.2□□□□□ -1.42
SMC4-225ENST00000497203 FGRP09769 529 aa6.2□□□□□ -1.42
SMC4-225ENST00000497203 LCE5AQ5TCM9 118 aa6.2□□□□□ -1.42
SMC4-225ENST00000497203 ANGEL2Q5VTE6 544 aaKnown RBP6.2□□□□□ -1.42
SMC4-225ENST00000497203 OGFOD2Q6N063 350 aa6.2□□□□□ -1.42
SMC4-225ENST00000497203 UBE2FQ969M7 185 aa6.2□□□□□ -1.42
SMC4-225ENST00000497203 VWCEQ96DN2 955 aa6.2□□□□□ -1.42
SMC4-225ENST00000497203 FERD3LQ96RJ6 166 aa6.2□□□□□ -1.42
SMC4-225ENST00000497203 SLC9A7Q96T83 725 aa6.2□□□□□ -1.42
SMC4-225ENST00000497203 PRDM7Q9NQW5 492 aa6.2□□□□□ -1.42
SMC4-225ENST00000497203 ZSWIM5Q9P217 1185 aa6.2□□□□□ -1.42
SMC4-225ENST00000497203 EFR3BQ9Y2G0 817 aa6.2□□□□□ -1.42
SMC4-225ENST00000497203 TNFRSF10CO14798 259 aa6.19□□□□□ -1.42
SMC4-225ENST00000497203 GTF2F1P35269 517 aaKnown RBP eCLIP6.19□□□□□ -1.42
SMC4-225ENST00000497203 ZNF792Q3KQV3 632 aa6.19□□□□□ -1.42
SMC4-225ENST00000497203 SOGA3Q5TF21 947 aa6.19□□□□□ -1.42
SMC4-225ENST00000497203 FBXW10Q5XX13 1052 aa6.19□□□□□ -1.42
SMC4-225ENST00000497203 CCDC81Q6ZN84 652 aa6.19□□□□□ -1.42
SMC4-225ENST00000497203 CBLL1Q75N03 491 aa6.19□□□□□ -1.42
SMC4-225ENST00000497203 THAP5Q7Z6K1 395 aa6.19□□□□□ -1.42
SMC4-225ENST00000497203 HIRIP3Q9BW71 556 aaPredicted RBP6.19□□□□□ -1.42
SMC4-225ENST00000497203 ASPNQ9BXN1 380 aa6.19□□□□□ -1.42
SMC4-225ENST00000497203 DUSP15Q9H1R2 295 aaPredicted RBP6.19□□□□□ -1.42
SMC4-225ENST00000497203 MBNL3Q9NUK0 354 aaKnown RBP6.19□□□□□ -1.42
SMC4-225ENST00000497203 STK10O94804 968 aaKnown RBP6.18□□□□□ -1.42
SMC4-225ENST00000497203 SSBP05455 408 aaKnown RBP eCLIP6.18□□□□□ -1.42
SMC4-225ENST00000497203 RNASE1P07998 156 aaKnown RBP6.18□□□□□ -1.42
SMC4-225ENST00000497203 ACRP10323 421 aa6.18□□□□□ -1.42
SMC4-225ENST00000497203 IMPDH2P12268 514 aa6.18□□□□□ -1.42
SMC4-225ENST00000497203 SOX9P48436 509 aa6.18□□□□□ -1.42
SMC4-225ENST00000497203 NASPP49321 788 aaPredicted RBP6.18□□□□□ -1.42
SMC4-225ENST00000497203 ZP2Q05996 745 aa6.18□□□□□ -1.42
SMC4-225ENST00000497203 RUFY4Q6ZNE9 571 aa6.18□□□□□ -1.42
SMC4-225ENST00000497203 MCF2L2Q86YR7 1114 aa6.18□□□□□ -1.42
SMC4-225ENST00000497203 POU5F2Q8N7G0 328 aa6.18□□□□□ -1.42
SMC4-225ENST00000497203 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP6.18□□□□□ -1.42
SMC4-225ENST00000497203 CARS2Q9HA77 564 aaKnown RBP6.18□□□□□ -1.42
SMC4-225ENST00000497203 KCNH3Q9ULD8 1083 aa6.18□□□□□ -1.42
SMC4-225ENST00000497203 SHISA3A0PJX4 238 aa6.17□□□□□ -1.42
SMC4-225ENST00000497203 FAM86C2PA6NEL3 165 aa6.17□□□□□ -1.42
SMC4-225ENST00000497203 SRFP11831 508 aa6.17□□□□□ -1.42
SMC4-225ENST00000497203 CCNFP41002 786 aa6.17□□□□□ -1.42
SMC4-225ENST00000497203 CHMP4BP1P59074 171 aa6.17□□□□□ -1.42
SMC4-225ENST00000497203 NBPF12Q5TAG4 269 aaPredicted RBP6.17□□□□□ -1.42
SMC4-225ENST00000497203 TMEM192Q8IY95 271 aa6.17□□□□□ -1.42
SMC4-225ENST00000497203 RBBP8NLQ8NC74 664 aaPredicted RBP6.17□□□□□ -1.42
SMC4-225ENST00000497203 PI4K2BQ8TCG2 481 aa6.17□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms