RNA–Protein interactions for RNA: ENST00000496896.1

TRIM4-205, Transcript of tripartite motif containing 4, humanhuman

TSL 5

Gene TRIM4, Length 601 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4-205ENST00000496896 H3BS24 57 aa7.26□□□□□ -1.25
TRIM4-205ENST00000496896 CCNFP41002 786 aa7.26□□□□□ -1.25
TRIM4-205ENST00000496896 LRRFIP1Q32MZ4 808 aaKnown RBP7.26□□□□□ -1.25
TRIM4-205ENST00000496896 USP48Q86UV5 1035 aa7.26□□□□□ -1.25
TRIM4-205ENST00000496896 DTWD2Q8NBA8 298 aa7.26□□□□□ -1.25
TRIM4-205ENST00000496896 LRRN4CLQ8ND94 238 aa7.26□□□□□ -1.25
TRIM4-205ENST00000496896 CCDC120Q96HB5 630 aa7.26□□□□□ -1.25
TRIM4-205ENST00000496896 KREMEN1Q96MU8 473 aa7.26□□□□□ -1.25
TRIM4-205ENST00000496896 NCANO14594 1321 aa7.26□□□□□ -1.25
TRIM4-205ENST00000496896 MEIS3P2A8K0S8 358 aa7.25□□□□□ -1.25
TRIM4-205ENST00000496896 TNNI2P48788 182 aa7.25□□□□□ -1.25
TRIM4-205ENST00000496896 GAB4Q2WGN9 574 aa7.25□□□□□ -1.25
TRIM4-205ENST00000496896 SEZ6Q53EL9 994 aa7.25□□□□□ -1.25
TRIM4-205ENST00000496896 PHACTR4Q8IZ21 702 aa7.25□□□□□ -1.25
TRIM4-205ENST00000496896 TMEM40Q8WWA1 233 aa7.25□□□□□ -1.25
TRIM4-205ENST00000496896 NKD1Q969G9 470 aa7.25□□□□□ -1.25
TRIM4-205ENST00000496896 UBE2FQ969M7 185 aa7.25□□□□□ -1.25
TRIM4-205ENST00000496896 VWCEQ96DN2 955 aa7.25□□□□□ -1.25
TRIM4-205ENST00000496896 EAF1Q96JC9 268 aaPredicted RBP7.25□□□□□ -1.25
TRIM4-205ENST00000496896 DUSP15Q9H1R2 295 aaPredicted RBP7.25□□□□□ -1.25
TRIM4-205ENST00000496896 CNNM2Q9H8M5 875 aa7.25□□□□□ -1.25
TRIM4-205ENST00000496896 PRRG2O14669 202 aa7.24□□□□□ -1.25
TRIM4-205ENST00000496896 RAD51AP2Q09MP3 1159 aa7.24□□□□□ -1.25
TRIM4-205ENST00000496896 LILRA6Q6PI73 481 aa7.24□□□□□ -1.25
TRIM4-205ENST00000496896 BAHD1Q8TBE0 780 aaPredicted RBP7.24□□□□□ -1.25
TRIM4-205ENST00000496896 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP7.24□□□□□ -1.25
TRIM4-205ENST00000496896 CARS2Q9HA77 564 aaKnown RBP7.24□□□□□ -1.25
TRIM4-205ENST00000496896 GPATCH2Q9NW75 528 aa7.24□□□□□ -1.25
TRIM4-205ENST00000496896 IMPDH2P12268 514 aa7.23□□□□□ -1.25
TRIM4-205ENST00000496896 RAG1P15918 1043 aa7.23□□□□□ -1.25
TRIM4-205ENST00000496896 GBP1P32455 592 aa7.23□□□□□ -1.25
TRIM4-205ENST00000496896 RNF4P78317 190 aa7.23□□□□□ -1.25
TRIM4-205ENST00000496896 CLCQ05315 142 aa7.23□□□□□ -1.25
TRIM4-205ENST00000496896 ARSHQ5FYA8 562 aa7.23□□□□□ -1.25
TRIM4-205ENST00000496896 OVOS1Q6IE37 1185 aa7.23□□□□□ -1.25
TRIM4-205ENST00000496896 RGS22Q8NE09 1264 aa7.23□□□□□ -1.25
TRIM4-205ENST00000496896 BHLHE22Q8NFJ8 381 aaPredicted RBP7.23□□□□□ -1.25
TRIM4-205ENST00000496896 KIF2CQ99661 725 aa7.23□□□□□ -1.25
TRIM4-205ENST00000496896 ZSWIM5Q9P217 1185 aa7.23□□□□□ -1.25
TRIM4-205ENST00000496896 DDX41Q9UJV9 622 aaKnown RBP7.23□□□□□ -1.25
TRIM4-205ENST00000496896 UBOX5O94941 541 aa7.22□□□□□ -1.25
TRIM4-205ENST00000496896 ZNF394Q53GI3 561 aa7.22□□□□□ -1.25
TRIM4-205ENST00000496896 NLRC3Q7RTR2 1065 aa7.22□□□□□ -1.25
TRIM4-205ENST00000496896 TSPYL5Q86VY4 417 aaPredicted RBP7.22□□□□□ -1.25
TRIM4-205ENST00000496896 ATG4CQ96DT6 458 aa7.22□□□□□ -1.25
TRIM4-205ENST00000496896 MRRFQ96E11 262 aaKnown RBP7.22□□□□□ -1.25
TRIM4-205ENST00000496896 FAM84AQ96KN4 292 aa7.22□□□□□ -1.25
TRIM4-205ENST00000496896 SPATA32Q96LK8 384 aa7.22□□□□□ -1.25
TRIM4-205ENST00000496896 PRDM7Q9NQW5 492 aa7.22□□□□□ -1.25
TRIM4-205ENST00000496896 CTNND2Q9UQB3 1225 aa7.22□□□□□ -1.25
TRIM4-205ENST00000496896 B8ZZF3 427 aa7.21□□□□□ -1.26
TRIM4-205ENST00000496896 TNFRSF10CO14798 259 aa7.21□□□□□ -1.26
TRIM4-205ENST00000496896 ESR1P03372 595 aa7.21□□□□□ -1.26
TRIM4-205ENST00000496896 TPP2P29144 1249 aaPredicted RBP7.21□□□□□ -1.26
TRIM4-205ENST00000496896 MCM4P33991 863 aa7.21□□□□□ -1.26
TRIM4-205ENST00000496896 GDNFP39905 211 aa7.21□□□□□ -1.26
TRIM4-205ENST00000496896 COL9A2Q14055 689 aaPredicted RBP7.21□□□□□ -1.26
TRIM4-205ENST00000496896 INTS3Q68E01 1043 aaKnown RBP7.21□□□□□ -1.26
TRIM4-205ENST00000496896 GK5Q6ZS86 529 aa7.21□□□□□ -1.26
TRIM4-205ENST00000496896 METTL16Q86W50 562 aaKnown RBP7.21□□□□□ -1.26
TRIM4-205ENST00000496896 ZNF654Q8IZM8 581 aa7.21□□□□□ -1.26
TRIM4-205ENST00000496896 ENOX1Q8TC92 643 aaKnown RBP7.21□□□□□ -1.26
TRIM4-205ENST00000496896 TOX2Q96NM4 488 aa7.21□□□□□ -1.26
TRIM4-205ENST00000496896 ALPK1Q96QP1 1244 aa7.21□□□□□ -1.26
TRIM4-205ENST00000496896 ZNRF3Q9ULT6 936 aa7.21□□□□□ -1.26
TRIM4-205ENST00000496896 AFMP43652 599 aa7.2□□□□□ -1.26
TRIM4-205ENST00000496896 CHMP4BP1P59074 171 aa7.2□□□□□ -1.26
TRIM4-205ENST00000496896 RACK1P63244 317 aaKnown RBP7.2□□□□□ -1.26
TRIM4-205ENST00000496896 TAB3Q8N5C8 712 aaPredicted RBP7.2□□□□□ -1.26
TRIM4-205ENST00000496896 PCDHGB7Q9Y5F8 929 aa7.2□□□□□ -1.26
TRIM4-205ENST00000496896 NME1P15531 152 aaKnown RBP7.19□□□□□ -1.26
TRIM4-205ENST00000496896 MESP2Q0VG99 397 aa7.19□□□□□ -1.26
TRIM4-205ENST00000496896 C19orf73Q9NVV2 129 aa7.19□□□□□ -1.26
TRIM4-205ENST00000496896 KIAA1522Q9P206 1035 aaPredicted RBP7.19□□□□□ -1.26
TRIM4-205ENST00000496896 CCDC9Q9Y3X0 531 aaKnown RBP7.19□□□□□ -1.26
TRIM4-205ENST00000496896 LRRN2O75325 713 aa7.18□□□□□ -1.26
TRIM4-205ENST00000496896 NBPF12Q5TAG4 269 aaPredicted RBP7.18□□□□□ -1.26
TRIM4-205ENST00000496896 CILP2Q8IUL8 1156 aa7.18□□□□□ -1.26
TRIM4-205ENST00000496896 RBBP8NLQ8NC74 664 aaPredicted RBP7.18□□□□□ -1.26
TRIM4-205ENST00000496896 KRTAP9-3Q9BYQ3 159 aa7.18□□□□□ -1.26
TRIM4-205ENST00000496896 DUSP13Q9UII6 198 aa7.18□□□□□ -1.26
TRIM4-205ENST00000496896 CLEC3AO75596 197 aa7.17□□□□□ -1.26
TRIM4-205ENST00000496896 ZSWIM9Q86XI8 627 aa7.17□□□□□ -1.26
TRIM4-205ENST00000496896 CREG2Q8IUH2 290 aa7.17□□□□□ -1.26
TRIM4-205ENST00000496896 ZSCAN18Q8TBC5 510 aaPredicted RBP7.17□□□□□ -1.26
TRIM4-205ENST00000496896 RASGRP4Q8TDF6 673 aa7.17□□□□□ -1.26
TRIM4-205ENST00000496896 SYTL5Q8TDW5 730 aaPredicted RBP7.17□□□□□ -1.26
TRIM4-205ENST00000496896 TM9SF2Q99805 663 aa7.17□□□□□ -1.26
TRIM4-205ENST00000496896 ASCC2Q9H1I8 757 aaPredicted RBP7.17□□□□□ -1.26
TRIM4-205ENST00000496896 TMEM59LQ9UK28 342 aa7.17□□□□□ -1.26
TRIM4-205ENST00000496896 UNCXA6NJT0 531 aa7.16□□□□□ -1.26
TRIM4-205ENST00000496896 CFPP27918 469 aa7.16□□□□□ -1.26
TRIM4-205ENST00000496896 NBPF9Q3BBW0 867 aa7.16□□□□□ -1.26
TRIM4-205ENST00000496896 DHRS1Q96LJ7 313 aa7.16□□□□□ -1.26
TRIM4-205ENST00000496896 ANTXR1Q9H6X2 564 aa7.16□□□□□ -1.26
TRIM4-205ENST00000496896 FAM53CQ9NYF3 392 aa7.16□□□□□ -1.26
TRIM4-205ENST00000496896 LRRC10BA6NIK2 292 aa7.15□□□□□ -1.26
TRIM4-205ENST00000496896 WASH4PA8MWX3 477 aa7.15□□□□□ -1.26
TRIM4-205ENST00000496896 RBAK-RBAKDNI3L0D1 243 aa7.15□□□□□ -1.26
TRIM4-205ENST00000496896 POLR2BP30876 1174 aaKnown RBP7.15□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms