RNA–Protein interactions for RNA: ENST00000496385.5

HPS4-217, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 2

Gene HPS4, Length 2,772 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-217ENST00000496385 PDCD2Q16342 344 aaPredicted RBP10.2□□□□□ -0.78
HPS4-217ENST00000496385 FILIP1LQ4L180 1135 aa10.2□□□□□ -0.78
HPS4-217ENST00000496385 TTC19Q6DKK2 380 aaPredicted RBP10.2□□□□□ -0.78
HPS4-217ENST00000496385 IQCEQ6IPM2 695 aa10.2□□□□□ -0.78
HPS4-217ENST00000496385 CCDC70Q6NSX1 233 aa10.2□□□□□ -0.78
HPS4-217ENST00000496385 FAM43BQ6ZT52 329 aaPredicted RBP10.2□□□□□ -0.78
HPS4-217ENST00000496385 P3H4Q92791 437 aa10.2□□□□□ -0.78
HPS4-217ENST00000496385 DESI2Q9BSY9 194 aa10.2□□□□□ -0.78
HPS4-217ENST00000496385 IRX2Q9BZI1 471 aaPredicted RBP10.2□□□□□ -0.78
HPS4-217ENST00000496385 EPN3Q9H201 632 aa10.2□□□□□ -0.78
HPS4-217ENST00000496385 SLC24A3Q9HC58 644 aa10.2□□□□□ -0.78
HPS4-217ENST00000496385 RREB1Q92766 1687 aa10.2□□□□□ -0.78
HPS4-217ENST00000496385 UBR2Q8IWV8 1755 aa10.2□□□□□ -0.78
HPS4-217ENST00000496385 PFKFB1P16118 471 aa10.2□□□□□ -0.78
HPS4-217ENST00000496385 ATP5JP18859 108 aa10.2□□□□□ -0.78
HPS4-217ENST00000496385 CCNHP51946 323 aaPredicted RBP10.2□□□□□ -0.78
HPS4-217ENST00000496385 NR1I3Q14994 352 aa10.2□□□□□ -0.78
HPS4-217ENST00000496385 SKIDA1Q1XH10 827 aa10.2□□□□□ -0.78
HPS4-217ENST00000496385 TMTC1Q8IUR5 882 aa10.2□□□□□ -0.78
HPS4-217ENST00000496385 CCDC13Q8IYE1 715 aa10.2□□□□□ -0.78
HPS4-217ENST00000496385 C1orf131Q8NDD1 294 aaKnown RBP10.2□□□□□ -0.78
HPS4-217ENST00000496385 PAIP2Q9BPZ3 127 aaKnown RBP10.2□□□□□ -0.78
HPS4-217ENST00000496385 SELENOOQ9BVL4 669 aa10.2□□□□□ -0.78
HPS4-217ENST00000496385 AGXT2Q9BYV1 514 aa10.2□□□□□ -0.78
HPS4-217ENST00000496385 SLC40A1Q9NP59 571 aa10.2□□□□□ -0.78
HPS4-217ENST00000496385 U3KPZ7 1027 aaPredicted RBP10.2□□□□□ -0.78
HPS4-217ENST00000496385 C5P01031 1676 aa10.19□□□□□ -0.78
HPS4-217ENST00000496385 TAF1LQ8IZX4 1826 aa10.19□□□□□ -0.78
HPS4-217ENST00000496385 TJP1Q07157 1748 aa10.19□□□□□ -0.78
HPS4-217ENST00000496385 RFX7Q2KHR2 1363 aa10.19□□□□□ -0.78
HPS4-217ENST00000496385 MAP3K15Q6ZN16 1313 aa10.19□□□□□ -0.78
HPS4-217ENST00000496385 SNUPNO95149 360 aaKnown RBP10.19□□□□□ -0.78
HPS4-217ENST00000496385 SYKP43405 635 aa10.19□□□□□ -0.78
HPS4-217ENST00000496385 AKAP17AQ02040 695 aaKnown RBP10.19□□□□□ -0.78
HPS4-217ENST00000496385 RAD9BQ6WBX8 426 aa10.19□□□□□ -0.78
HPS4-217ENST00000496385 TRAPPC11Q7Z392 1133 aa10.19□□□□□ -0.78
HPS4-217ENST00000496385 PPFIBP1Q86W92 1011 aa10.19□□□□□ -0.78
HPS4-217ENST00000496385 CNGA4Q8IV77 575 aa10.19□□□□□ -0.78
HPS4-217ENST00000496385 MLKLQ8NB16 471 aa10.19□□□□□ -0.78
HPS4-217ENST00000496385 SAAL1Q96ER3 474 aa10.19□□□□□ -0.78
HPS4-217ENST00000496385 TCEANC2Q96MN5 208 aa10.19□□□□□ -0.78
HPS4-217ENST00000496385 TMX4Q9H1E5 349 aaPredicted RBP10.19□□□□□ -0.78
HPS4-217ENST00000496385 BABAM1Q9NWV8 329 aa10.19□□□□□ -0.78
HPS4-217ENST00000496385 HPSEQ9Y251 543 aa10.19□□□□□ -0.78
HPS4-217ENST00000496385 ZBTB1Q9Y2K1 713 aa10.19□□□□□ -0.78
HPS4-217ENST00000496385 MYH14Q7Z406 1995 aaKnown RBP10.19□□□□□ -0.78
HPS4-217ENST00000496385 A0A1B0GTH6 734 aa10.19□□□□□ -0.78
HPS4-217ENST00000496385 SNRPA1P09661 255 aaKnown RBP10.19□□□□□ -0.78
HPS4-217ENST00000496385 MYBL2P10244 700 aa10.19□□□□□ -0.78
HPS4-217ENST00000496385 CYP19A1P11511 503 aaPredicted RBP10.19□□□□□ -0.78
HPS4-217ENST00000496385 MYL6BP14649 208 aa10.19□□□□□ -0.78
HPS4-217ENST00000496385 GCKP35557 465 aa10.19□□□□□ -0.78
HPS4-217ENST00000496385 SLC15A2Q16348 729 aa10.19□□□□□ -0.78
HPS4-217ENST00000496385 STK32BQ9NY57 414 aa10.19□□□□□ -0.78
HPS4-217ENST00000496385 CPSF2Q9P2I0 782 aaKnown RBP10.19□□□□□ -0.78
HPS4-217ENST00000496385 TAF5LO75529 589 aa10.18□□□□□ -0.78
HPS4-217ENST00000496385 PECAM1P16284 738 aaPredicted RBP10.18□□□□□ -0.78
HPS4-217ENST00000496385 CDCA2Q69YH5 1023 aaPredicted RBP10.18□□□□□ -0.78
HPS4-217ENST00000496385 AENQ8WTP8 325 aaKnown RBP10.18□□□□□ -0.78
HPS4-217ENST00000496385 ZNF274Q96GC6 653 aaPredicted RBP10.18□□□□□ -0.78
HPS4-217ENST00000496385 FAM227BQ96M60 508 aa10.18□□□□□ -0.78
HPS4-217ENST00000496385 SAMM50Q9Y512 469 aa10.18□□□□□ -0.78
HPS4-217ENST00000496385 C4BP0C0L5 1744 aa10.18□□□□□ -0.78
HPS4-217ENST00000496385 SOWAHDA6NJG2 315 aa10.18□□□□□ -0.78
HPS4-217ENST00000496385 PSMD14O00487 310 aa10.18□□□□□ -0.78
HPS4-217ENST00000496385 PPP6R2O75170 966 aa10.18□□□□□ -0.78
HPS4-217ENST00000496385 CTDNEP1O95476 244 aa10.18□□□□□ -0.78
HPS4-217ENST00000496385 GBP2P32456 591 aaPredicted RBP10.18□□□□□ -0.78
HPS4-217ENST00000496385 INTS5Q6P9B9 1019 aaKnown RBP10.18□□□□□ -0.78
HPS4-217ENST00000496385 CYB5D1Q6P9G0 228 aa10.18□□□□□ -0.78
HPS4-217ENST00000496385 C6orf89Q6UWU4 347 aa10.18□□□□□ -0.78
HPS4-217ENST00000496385 SYNE3Q6ZMZ3 975 aa10.18□□□□□ -0.78
HPS4-217ENST00000496385 TRIML1Q8N9V2 468 aa10.18□□□□□ -0.78
HPS4-217ENST00000496385 RIN2Q8WYP3 895 aaPredicted RBP10.18□□□□□ -0.78
HPS4-217ENST00000496385 AKT1S1Q96B36 256 aa10.18□□□□□ -0.78
HPS4-217ENST00000496385 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.17□□□□□ -0.78
HPS4-217ENST00000496385 LIN7AO14910 233 aaPredicted RBP10.17□□□□□ -0.78
HPS4-217ENST00000496385 ITIH3Q06033 890 aa10.17□□□□□ -0.78
HPS4-217ENST00000496385 PROSER3Q2NL68 480 aa10.17□□□□□ -0.78
HPS4-217ENST00000496385 ZC3H12AQ5D1E8 599 aaKnown RBP10.17□□□□□ -0.78
HPS4-217ENST00000496385 PAPD7Q5XG87 772 aaKnown RBP10.17□□□□□ -0.78
HPS4-217ENST00000496385 MSL1Q68DK7 614 aa10.17□□□□□ -0.78
HPS4-217ENST00000496385 CRELD2Q6UXH1 353 aaPredicted RBP10.17□□□□□ -0.78
HPS4-217ENST00000496385 KDM7AQ6ZMT4 941 aa10.17□□□□□ -0.78
HPS4-217ENST00000496385 FUKQ8N0W3 1084 aa10.17□□□□□ -0.78
HPS4-217ENST00000496385 CTAGE1Q96RT6 745 aa10.17□□□□□ -0.78
HPS4-217ENST00000496385 SIL1Q9H173 461 aa10.17□□□□□ -0.78
HPS4-217ENST00000496385 ITIH6Q6UXX5 1313 aa10.17□□□□□ -0.78
HPS4-217ENST00000496385 RGPD3A6NKT7 1758 aaPredicted RBP10.17□□□□□ -0.78
HPS4-217ENST00000496385 RGPD4Q7Z3J3 1758 aa10.17□□□□□ -0.78
HPS4-217ENST00000496385 OS9Q13438 667 aaPredicted RBP10.17□□□□□ -0.78
HPS4-217ENST00000496385 MTF1Q14872 753 aa10.17□□□□□ -0.78
HPS4-217ENST00000496385 NAA25Q14CX7 972 aa10.17□□□□□ -0.78
HPS4-217ENST00000496385 NAA35Q5VZE5 725 aa10.17□□□□□ -0.78
HPS4-217ENST00000496385 ZNF662Q6ZS27 426 aa10.17□□□□□ -0.78
HPS4-217ENST00000496385 TTLL7Q6ZT98 887 aa10.17□□□□□ -0.78
HPS4-217ENST00000496385 DHX32Q7L7V1 743 aaKnown RBP10.17□□□□□ -0.78
HPS4-217ENST00000496385 CEP57Q86XR8 500 aa10.17□□□□□ -0.78
HPS4-217ENST00000496385 FBXL16Q8N461 479 aa10.17□□□□□ -0.78
HPS4-217ENST00000496385 CCHCR1Q8TD31 782 aa10.17□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms