RNA–Protein interactions for RNA: ENST00000496375.1

CXCL12-208, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 5

Gene CXCL12, Length 803 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-208ENST00000496375 MNX1P50219 401 aaPredicted RBP17.32■□□□□ 0.36
CXCL12-208ENST00000496375 TMEM179Q6ZVK1 233 aa17.32■□□□□ 0.36
CXCL12-208ENST00000496375 DYNLL2Q96FJ2 89 aa17.32■□□□□ 0.36
CXCL12-208ENST00000496375 C11orf49Q9H6J7 331 aa17.32■□□□□ 0.36
CXCL12-208ENST00000496375 ATP8A2Q9NTI2 1148 aa17.32■□□□□ 0.36
CXCL12-208ENST00000496375 SMARCA5O60264 1052 aaPredicted RBP17.31■□□□□ 0.36
CXCL12-208ENST00000496375 CCND3P30281 292 aaPredicted RBP17.31■□□□□ 0.36
CXCL12-208ENST00000496375 SMC5Q8IY18 1101 aa17.31■□□□□ 0.36
CXCL12-208ENST00000496375 C7orf61Q8IZ16 206 aa17.31■□□□□ 0.36
CXCL12-208ENST00000496375 SLC15A5A6NIM6 579 aa17.3■□□□□ 0.36
CXCL12-208ENST00000496375 AKR1B1P15121 316 aa17.3■□□□□ 0.36
CXCL12-208ENST00000496375 PTPREP23469 700 aa17.3■□□□□ 0.36
CXCL12-208ENST00000496375 UBE3CQ15386 1083 aa17.3■□□□□ 0.36
CXCL12-208ENST00000496375 TANGO6Q9C0B7 1094 aa17.3■□□□□ 0.36
CXCL12-208ENST00000496375 CYP2D7A0A087X1C5 515 aa17.29■□□□□ 0.36
CXCL12-208ENST00000496375 SMIM22K7EJ46 135 aa17.29■□□□□ 0.36
CXCL12-208ENST00000496375 GRB14Q14449 540 aa17.29■□□□□ 0.36
CXCL12-208ENST00000496375 COG2Q14746 738 aa17.29■□□□□ 0.36
CXCL12-208ENST00000496375 LHX8Q68G74 356 aa17.29■□□□□ 0.36
CXCL12-208ENST00000496375 ZSCAN25Q6NSZ9 544 aa17.29■□□□□ 0.36
CXCL12-208ENST00000496375 CLEC10AQ8IUN9 316 aa17.29■□□□□ 0.36
CXCL12-208ENST00000496375 AMOTL1Q8IY63 956 aa17.29■□□□□ 0.36
CXCL12-208ENST00000496375 RWDD1Q9H446 243 aaPredicted RBP17.29■□□□□ 0.36
CXCL12-208ENST00000496375 ARHGEF10LQ9HCE6 1279 aa17.29■□□□□ 0.36
CXCL12-208ENST00000496375 FLRT1Q9NZU1 646 aa17.29■□□□□ 0.36
CXCL12-208ENST00000496375 STAP2Q9UGK3 403 aa17.29■□□□□ 0.36
CXCL12-208ENST00000496375 IVNS1ABPQ9Y6Y0 642 aa17.29■□□□□ 0.36
CXCL12-208ENST00000496375 RLFQ13129 1914 aa17.28■□□□□ 0.36
CXCL12-208ENST00000496375 USP17L12C9JPN9 530 aa17.28■□□□□ 0.36
CXCL12-208ENST00000496375 USP17L21D6R901 530 aa17.28■□□□□ 0.36
CXCL12-208ENST00000496375 ICA1Q05084 483 aa17.28■□□□□ 0.36
CXCL12-208ENST00000496375 KIAA1755Q5JYT7 1200 aa17.28■□□□□ 0.36
CXCL12-208ENST00000496375 C12orf60Q5U649 245 aa17.28■□□□□ 0.36
CXCL12-208ENST00000496375 MFSD14CQ5VZR4 134 aa17.28■□□□□ 0.36
CXCL12-208ENST00000496375 DDRGK1Q96HY6 314 aa17.28■□□□□ 0.36
CXCL12-208ENST00000496375 HOXC10Q9NYD6 342 aa17.28■□□□□ 0.36
CXCL12-208ENST00000496375 SLC4A4Q9Y6R1 1079 aa17.28■□□□□ 0.36
CXCL12-208ENST00000496375 PFASO15067 1338 aa17.27■□□□□ 0.36
CXCL12-208ENST00000496375 SALL3Q9BXA9 1300 aa17.27■□□□□ 0.36
CXCL12-208ENST00000496375 HOXC6P09630 235 aa17.27■□□□□ 0.36
CXCL12-208ENST00000496375 CDK8P49336 464 aa17.27■□□□□ 0.36
CXCL12-208ENST00000496375 IRX6P78412 446 aaPredicted RBP17.27■□□□□ 0.36
CXCL12-208ENST00000496375 ATP2B2Q01814 1243 aa17.27■□□□□ 0.36
CXCL12-208ENST00000496375 C16orf86Q6ZW13 317 aa17.27■□□□□ 0.36
CXCL12-208ENST00000496375 SIAH1Q8IUQ4 282 aa17.27■□□□□ 0.36
CXCL12-208ENST00000496375 SPICE1Q8N0Z3 855 aa17.27■□□□□ 0.36
CXCL12-208ENST00000496375 NPLOC4Q8TAT6 608 aa17.27■□□□□ 0.36
CXCL12-208ENST00000496375 LPAR1Q92633 364 aa17.27■□□□□ 0.36
CXCL12-208ENST00000496375 CCDC17Q96LX7 622 aa17.27■□□□□ 0.36
CXCL12-208ENST00000496375 MOV10L1Q9BXT6 1211 aaKnown RBP17.27■□□□□ 0.36
CXCL12-208ENST00000496375 PUS7LQ9H0K6 701 aaKnown RBP17.27■□□□□ 0.36
CXCL12-208ENST00000496375 ZMYND8Q9ULU4 1186 aaPredicted RBP17.27■□□□□ 0.36
CXCL12-208ENST00000496375 TMX2Q9Y320 296 aa17.27■□□□□ 0.36
CXCL12-208ENST00000496375 A0A0G2JMZ2 1700 aa17.27■□□□□ 0.35
CXCL12-208ENST00000496375 LAMA3Q16787 3333 aa17.26■□□□□ 0.35
CXCL12-208ENST00000496375 FRMPD3Q5JV73 1810 aa17.26■□□□□ 0.35
CXCL12-208ENST00000496375 DNAH12Q6ZR08 3092 aa17.26■□□□□ 0.35
CXCL12-208ENST00000496375 A0A1W2PPC1 479 aa17.26■□□□□ 0.35
CXCL12-208ENST00000496375 IGHDP01880 384 aa17.26■□□□□ 0.35
CXCL12-208ENST00000496375 SPATC1LQ9H0A9 340 aa17.26■□□□□ 0.35
CXCL12-208ENST00000496375 SH2D4AQ9H788 454 aa17.26■□□□□ 0.35
CXCL12-208ENST00000496375 VCPKMTQ9H867 229 aa17.26■□□□□ 0.35
CXCL12-208ENST00000496375 ECHDC1Q9NTX5 307 aa17.26■□□□□ 0.35
CXCL12-208ENST00000496375 FLOT1O75955 427 aa17.25■□□□□ 0.35
CXCL12-208ENST00000496375 COL6A1P12109 1028 aa17.25■□□□□ 0.35
CXCL12-208ENST00000496375 DSG3P32926 999 aa17.25■□□□□ 0.35
CXCL12-208ENST00000496375 CTR9Q6PD62 1173 aa17.25■□□□□ 0.35
CXCL12-208ENST00000496375 DPP9Q86TI2 863 aa17.25■□□□□ 0.35
CXCL12-208ENST00000496375 MB21D1Q8N884 522 aa17.25■□□□□ 0.35
CXCL12-208ENST00000496375 ZNF236Q9UL36 1845 aa17.24■□□□□ 0.35
CXCL12-208ENST00000496375 SYN1P17600 705 aa17.24■□□□□ 0.35
CXCL12-208ENST00000496375 ERCC3P19447 782 aa17.24■□□□□ 0.35
CXCL12-208ENST00000496375 ADORA2AP29274 412 aa17.24■□□□□ 0.35
CXCL12-208ENST00000496375 CYP2C19P33261 490 aa17.24■□□□□ 0.35
CXCL12-208ENST00000496375 PLS1Q14651 629 aa17.24■□□□□ 0.35
CXCL12-208ENST00000496375 SAMD1Q6SPF0 538 aaPredicted RBP17.24■□□□□ 0.35
CXCL12-208ENST00000496375 SHCBP1Q8NEM2 672 aa17.24■□□□□ 0.35
CXCL12-208ENST00000496375 ATG4CQ96DT6 458 aa17.24■□□□□ 0.35
CXCL12-208ENST00000496375 GDF15Q99988 308 aa17.24■□□□□ 0.35
CXCL12-208ENST00000496375 PARP14Q460N5 1801 aa17.24■□□□□ 0.35
CXCL12-208ENST00000496375 TTC41PQ6P2S7 1318 aa17.23■□□□□ 0.35
CXCL12-208ENST00000496375 WDR46O15213 610 aaKnown RBP17.23■□□□□ 0.35
CXCL12-208ENST00000496375 STRNO43815 780 aa17.23■□□□□ 0.35
CXCL12-208ENST00000496375 EEF2P13639 858 aaKnown RBP17.23■□□□□ 0.35
CXCL12-208ENST00000496375 CNGA1P29973 690 aa17.23■□□□□ 0.35
CXCL12-208ENST00000496375 TSHZ3Q63HK5 1081 aa17.23■□□□□ 0.35
CXCL12-208ENST00000496375 KBTBD3Q8NAB2 608 aa17.23■□□□□ 0.35
CXCL12-208ENST00000496375 TRPV1Q8NER1 839 aa17.23■□□□□ 0.35
CXCL12-208ENST00000496375 GPATCH3Q96I76 525 aa17.23■□□□□ 0.35
CXCL12-208ENST00000496375 STRBPQ96SI9 672 aaKnown RBP17.23■□□□□ 0.35
CXCL12-208ENST00000496375 KANSL2Q9H9L4 492 aa17.23■□□□□ 0.35
CXCL12-208ENST00000496375 ARPP21Q9UBL0 812 aaPredicted RBP17.23■□□□□ 0.35
CXCL12-208ENST00000496375 DDX20Q9UHI6 824 aaKnown RBP17.23■□□□□ 0.35
CXCL12-208ENST00000496375 MSCO60682 206 aa17.22■□□□□ 0.35
CXCL12-208ENST00000496375 NCAPG2Q86XI2 1143 aa17.22■□□□□ 0.35
CXCL12-208ENST00000496375 MROH8Q9H579 483 aa17.22■□□□□ 0.35
CXCL12-208ENST00000496375 SOX1O00570 391 aaPredicted RBP17.21■□□□□ 0.35
CXCL12-208ENST00000496375 IGHA2P01877 340 aa17.21■□□□□ 0.35
CXCL12-208ENST00000496375 CYBAP13498 195 aa17.21■□□□□ 0.35
CXCL12-208ENST00000496375 BMP8BP34820 402 aa17.21■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms