RNA–Protein interactions for RNA: ENST00000496323.1

SPTBN1-205, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 2

Gene SPTBN1, Length 2,225 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-205ENST00000496323 MTMR7Q9Y216 660 aa15.79■□□□□ 0.12
SPTBN1-205ENST00000496323 HLA-DOAP06340 250 aa15.78■□□□□ 0.12
SPTBN1-205ENST00000496323 TOP1P11387 765 aaKnown RBP15.78■□□□□ 0.12
SPTBN1-205ENST00000496323 SCG2P13521 617 aa15.78■□□□□ 0.12
SPTBN1-205ENST00000496323 DALRD3Q5D0E6 543 aaKnown RBP15.78■□□□□ 0.12
SPTBN1-205ENST00000496323 AXDND1Q5T1B0 1012 aaPredicted RBP15.78■□□□□ 0.12
SPTBN1-205ENST00000496323 ENGASEQ8NFI3 743 aa15.78■□□□□ 0.12
SPTBN1-205ENST00000496323 MYO3BQ8WXR4 1341 aa15.78■□□□□ 0.12
SPTBN1-205ENST00000496323 CLSTN2Q9H4D0 955 aa15.78■□□□□ 0.12
SPTBN1-205ENST00000496323 A0A1W2PQ27 194 aa15.78■□□□□ 0.12
SPTBN1-205ENST00000496323 A0A1W2PQ64 194 aa15.78■□□□□ 0.12
SPTBN1-205ENST00000496323 A0A1W2PQD8 194 aa15.78■□□□□ 0.12
SPTBN1-205ENST00000496323 GOLGA8HP0CJ92 632 aa15.78■□□□□ 0.12
SPTBN1-205ENST00000496323 XBP1P17861 261 aa15.78■□□□□ 0.12
SPTBN1-205ENST00000496323 CLEC10AQ8IUN9 316 aa15.78■□□□□ 0.12
SPTBN1-205ENST00000496323 DHX36Q9H2U1 1008 aaKnown RBP15.78■□□□□ 0.12
SPTBN1-205ENST00000496323 ZNRF3Q9ULT6 936 aa15.78■□□□□ 0.12
SPTBN1-205ENST00000496323 ZBTB12Q9Y330 459 aaPredicted RBP15.78■□□□□ 0.12
SPTBN1-205ENST00000496323 MYH15Q9Y2K3 1946 aa15.77■□□□□ 0.12
SPTBN1-205ENST00000496323 MYH1P12882 1939 aa15.77■□□□□ 0.12
SPTBN1-205ENST00000496323 MARCKSP29966 332 aaPredicted RBP15.77■□□□□ 0.12
SPTBN1-205ENST00000496323 GNAQP50148 359 aa15.77■□□□□ 0.12
SPTBN1-205ENST00000496323 EARS2Q5JPH6 523 aaKnown RBP15.77■□□□□ 0.12
SPTBN1-205ENST00000496323 FSIP1Q8NA03 581 aa15.77■□□□□ 0.12
SPTBN1-205ENST00000496323 PPP1R1BQ9UD71 204 aaPredicted RBP15.77■□□□□ 0.12
SPTBN1-205ENST00000496323 USP17L2Q6R6M4 530 aa15.76■□□□□ 0.11
SPTBN1-205ENST00000496323 RBM43Q6ZSC3 357 aaKnown RBP15.76■□□□□ 0.11
SPTBN1-205ENST00000496323 KLHL34Q8N239 644 aa15.76■□□□□ 0.11
SPTBN1-205ENST00000496323 RNF214Q8ND24 703 aa15.76■□□□□ 0.11
SPTBN1-205ENST00000496323 TNFRSF25Q93038 417 aa15.76■□□□□ 0.11
SPTBN1-205ENST00000496323 FAM205CA6NFA0 338 aa15.76■□□□□ 0.11
SPTBN1-205ENST00000496323 FAM196BA6NMK8 535 aa15.76■□□□□ 0.11
SPTBN1-205ENST00000496323 KRT2P35908 639 aa15.76■□□□□ 0.11
SPTBN1-205ENST00000496323 TNMDQ9H2S6 317 aa15.76■□□□□ 0.11
SPTBN1-205ENST00000496323 CPVLQ9H3G5 476 aa15.76■□□□□ 0.11
SPTBN1-205ENST00000496323 CABP5Q9NP86 173 aa15.76■□□□□ 0.11
SPTBN1-205ENST00000496323 PI4KBQ9UBF8 816 aa15.76■□□□□ 0.11
SPTBN1-205ENST00000496323 SPDYE2BA6NHP3 402 aa15.75■□□□□ 0.11
SPTBN1-205ENST00000496323 USP17L5A8MUK1 530 aa15.75■□□□□ 0.11
SPTBN1-205ENST00000496323 KLRF2D3W0D1 207 aa15.75■□□□□ 0.11
SPTBN1-205ENST00000496323 ADAMTS3O15072 1205 aa15.75■□□□□ 0.11
SPTBN1-205ENST00000496323 PPP6R2O75170 966 aa15.75■□□□□ 0.11
SPTBN1-205ENST00000496323 SPDYE6P0CI01 402 aa15.75■□□□□ 0.11
SPTBN1-205ENST00000496323 EIF6P56537 245 aaKnown RBP15.75■□□□□ 0.11
SPTBN1-205ENST00000496323 FAM160A1Q05DH4 1040 aa15.75■□□□□ 0.11
SPTBN1-205ENST00000496323 MAP3K11Q16584 847 aa15.75■□□□□ 0.11
SPTBN1-205ENST00000496323 RILPL1Q5EBL4 403 aa15.75■□□□□ 0.11
SPTBN1-205ENST00000496323 NIM1KQ8IY84 436 aa15.75■□□□□ 0.11
SPTBN1-205ENST00000496323 MRPS27Q92552 414 aaKnown RBP15.75■□□□□ 0.11
SPTBN1-205ENST00000496323 EIF4ENIF1Q9NRA8 985 aaKnown RBP15.75■□□□□ 0.11
SPTBN1-205ENST00000496323 A0A1B0GVL5 298 aa15.75■□□□□ 0.11
SPTBN1-205ENST00000496323 PARP1P09874 1014 aaKnown RBP15.75■□□□□ 0.11
SPTBN1-205ENST00000496323 PTGER2P43116 358 aa15.75■□□□□ 0.11
SPTBN1-205ENST00000496323 CXCL9Q07325 125 aa15.75■□□□□ 0.11
SPTBN1-205ENST00000496323 SHROOM1Q2M3G4 852 aaPredicted RBP15.75■□□□□ 0.11
SPTBN1-205ENST00000496323 NOM1Q5C9Z4 860 aaKnown RBP15.75■□□□□ 0.11
SPTBN1-205ENST00000496323 TYW1BQ6NUM6 668 aa15.75■□□□□ 0.11
SPTBN1-205ENST00000496323 CCDC73Q6ZRK6 1079 aa15.75■□□□□ 0.11
SPTBN1-205ENST00000496323 CKAP2LQ8IYA6 745 aa15.75■□□□□ 0.11
SPTBN1-205ENST00000496323 FMR1NBQ8N0W7 255 aaPredicted RBP15.75■□□□□ 0.11
SPTBN1-205ENST00000496323 UPF1Q92900 1129 aaKnown RBP eCLIP15.75■□□□□ 0.11
SPTBN1-205ENST00000496323 LZTS2Q9BRK4 669 aa15.75■□□□□ 0.11
SPTBN1-205ENST00000496323 PCDHB6Q9Y5E3 794 aa15.75■□□□□ 0.11
SPTBN1-205ENST00000496323 NFKBIEO00221 500 aa15.74■□□□□ 0.11
SPTBN1-205ENST00000496323 ENTPD3O75355 529 aa15.74■□□□□ 0.11
SPTBN1-205ENST00000496323 TTLL1O95922 423 aa15.74■□□□□ 0.11
SPTBN1-205ENST00000496323 PDHBP11177 359 aa15.74■□□□□ 0.11
SPTBN1-205ENST00000496323 NDUFA8P51970 172 aa15.74■□□□□ 0.11
SPTBN1-205ENST00000496323 METTL16Q86W50 562 aaKnown RBP15.74■□□□□ 0.11
SPTBN1-205ENST00000496323 ZSCAN29Q8IWY8 852 aaPredicted RBP15.74■□□□□ 0.11
SPTBN1-205ENST00000496323 LRRC47Q8N1G4 583 aaKnown RBP15.74■□□□□ 0.11
SPTBN1-205ENST00000496323 GPKOWQ92917 476 aaPredicted RBP eCLIP15.74■□□□□ 0.11
SPTBN1-205ENST00000496323 TAOK3Q9H2K8 898 aa15.74■□□□□ 0.11
SPTBN1-205ENST00000496323 CLIP2Q9UDT6 1046 aa15.74■□□□□ 0.11
SPTBN1-205ENST00000496323 ATRNL1Q5VV63 1379 aa15.74■□□□□ 0.11
SPTBN1-205ENST00000496323 CMA1P23946 247 aa15.74■□□□□ 0.11
SPTBN1-205ENST00000496323 TATDN1Q6P1N9 297 aa15.74■□□□□ 0.11
SPTBN1-205ENST00000496323 SPZ1Q9BXG8 430 aa15.74■□□□□ 0.11
SPTBN1-205ENST00000496323 CD2APQ9Y5K6 639 aa15.74■□□□□ 0.11
SPTBN1-205ENST00000496323 PSDA5PKW4 1024 aaPredicted RBP15.73■□□□□ 0.11
SPTBN1-205ENST00000496323 SNHG28P0DPA3 235 aa15.73■□□□□ 0.11
SPTBN1-205ENST00000496323 NLRP5P59047 1200 aa15.73■□□□□ 0.11
SPTBN1-205ENST00000496323 FOXP4Q8IVH2 680 aaPredicted RBP15.73■□□□□ 0.11
SPTBN1-205ENST00000496323 CCDC17Q96LX7 622 aa15.73■□□□□ 0.11
SPTBN1-205ENST00000496323 MPHOSPH10O00566 681 aaKnown RBP15.72■□□□□ 0.11
SPTBN1-205ENST00000496323 WNT7AO00755 349 aa15.72■□□□□ 0.11
SPTBN1-205ENST00000496323 WWC2Q6AWC2 1192 aa15.72■□□□□ 0.11
SPTBN1-205ENST00000496323 SHC4Q6S5L8 630 aa15.72■□□□□ 0.11
SPTBN1-205ENST00000496323 AGBL3Q8NEM8 1001 aa15.72■□□□□ 0.11
SPTBN1-205ENST00000496323 CLIC6Q96NY7 704 aa15.72■□□□□ 0.11
SPTBN1-205ENST00000496323 SH3GLB2Q9NR46 395 aa15.72■□□□□ 0.11
SPTBN1-205ENST00000496323 CLRN2A0PK11 232 aa15.72■□□□□ 0.11
SPTBN1-205ENST00000496323 DLGAP5Q15398 846 aa15.72■□□□□ 0.11
SPTBN1-205ENST00000496323 CERKLQ49MI3 558 aaPredicted RBP15.72■□□□□ 0.11
SPTBN1-205ENST00000496323 OGFOD1Q8N543 542 aa15.72■□□□□ 0.11
SPTBN1-205ENST00000496323 JMYQ8N9B5 988 aa15.72■□□□□ 0.11
SPTBN1-205ENST00000496323 BRMS1Q9HCU9 246 aa15.72■□□□□ 0.11
SPTBN1-205ENST00000496323 ZNF70Q9UC06 446 aaPredicted RBP15.72■□□□□ 0.11
SPTBN1-205ENST00000496323 HDAC9Q9UKV0 1011 aa15.72■□□□□ 0.11
SPTBN1-205ENST00000496323 FRMPD2Q68DX3 1309 aaPredicted RBP15.72■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms