RNA–Protein interactions for RNA: ENST00000496318.5

HLA-DQA1-207, Transcript of major histocompatibility complex, class II, DQ alpha 1, humanhuman

Gene HLA-DQA1, Length 696 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1-207ENST00000496318 USP17L13C9JLJ4 530 aa13.93□□□□□ -0.18
HLA-DQA1-207ENST00000496318 USP17L11C9JVI0 530 aa13.93□□□□□ -0.18
HLA-DQA1-207ENST00000496318 USP17L18D6R9N7 530 aa13.93□□□□□ -0.18
HLA-DQA1-207ENST00000496318 USP17L22D6RA61 530 aa13.93□□□□□ -0.18
HLA-DQA1-207ENST00000496318 USP17L17D6RBQ6 530 aa13.93□□□□□ -0.18
HLA-DQA1-207ENST00000496318 USP17L19D6RCP7 530 aa13.93□□□□□ -0.18
HLA-DQA1-207ENST00000496318 USP17L20D6RJB6 530 aa13.93□□□□□ -0.18
HLA-DQA1-207ENST00000496318 FOXP2O15409 715 aa13.93□□□□□ -0.18
HLA-DQA1-207ENST00000496318 RAD21O60216 631 aa13.93□□□□□ -0.18
HLA-DQA1-207ENST00000496318 USP17L24Q0WX57 530 aa13.93□□□□□ -0.18
HLA-DQA1-207ENST00000496318 PRPF38BQ5VTL8 546 aaKnown RBP13.93□□□□□ -0.18
HLA-DQA1-207ENST00000496318 TMEM179Q6ZVK1 233 aa13.93□□□□□ -0.18
HLA-DQA1-207ENST00000496318 GPR142Q7Z601 462 aa13.93□□□□□ -0.18
HLA-DQA1-207ENST00000496318 DIS3LQ8TF46 1054 aaKnown RBP13.93□□□□□ -0.18
HLA-DQA1-207ENST00000496318 DEFB118Q96PH6 123 aa13.93□□□□□ -0.18
HLA-DQA1-207ENST00000496318 FBXO28Q9NVF7 368 aa13.93□□□□□ -0.18
HLA-DQA1-207ENST00000496318 EEF2P13639 858 aaKnown RBP13.92□□□□□ -0.18
HLA-DQA1-207ENST00000496318 RASA1P20936 1047 aa13.92□□□□□ -0.18
HLA-DQA1-207ENST00000496318 UBXN2AP68543 259 aa13.92□□□□□ -0.18
HLA-DQA1-207ENST00000496318 IRF5Q13568 498 aa13.92□□□□□ -0.18
HLA-DQA1-207ENST00000496318 U2AF1L4Q8WU68 220 aaKnown RBP13.92□□□□□ -0.18
HLA-DQA1-207ENST00000496318 NUP88Q99567 741 aaPredicted RBP13.92□□□□□ -0.18
HLA-DQA1-207ENST00000496318 INCENPQ9NQS7 918 aa13.92□□□□□ -0.18
HLA-DQA1-207ENST00000496318 SWAP70Q9UH65 585 aa13.92□□□□□ -0.18
HLA-DQA1-207ENST00000496318 TACC3Q9Y6A5 838 aa13.92□□□□□ -0.18
HLA-DQA1-207ENST00000496318 GLRX3O76003 335 aaKnown RBP13.91□□□□□ -0.18
HLA-DQA1-207ENST00000496318 APPP05067 770 aa13.91□□□□□ -0.18
HLA-DQA1-207ENST00000496318 GJB1P08034 283 aa13.91□□□□□ -0.18
HLA-DQA1-207ENST00000496318 TDO2P48775 406 aa13.91□□□□□ -0.18
HLA-DQA1-207ENST00000496318 USP14P54578 494 aa13.91□□□□□ -0.18
HLA-DQA1-207ENST00000496318 PDE1AP54750 535 aa13.91□□□□□ -0.18
HLA-DQA1-207ENST00000496318 HDAC1Q13547 482 aaPredicted RBP13.91□□□□□ -0.18
HLA-DQA1-207ENST00000496318 ZMYM1Q5SVZ6 1142 aa13.91□□□□□ -0.18
HLA-DQA1-207ENST00000496318 VPS53Q5VIR6 699 aa13.91□□□□□ -0.18
HLA-DQA1-207ENST00000496318 RASGRP2Q7LDG7 609 aa13.91□□□□□ -0.18
HLA-DQA1-207ENST00000496318 ATG4CQ96DT6 458 aa13.91□□□□□ -0.18
HLA-DQA1-207ENST00000496318 FLRT1Q9NZU1 646 aa13.91□□□□□ -0.18
HLA-DQA1-207ENST00000496318 ARPP21Q9UBL0 812 aaPredicted RBP13.91□□□□□ -0.18
HLA-DQA1-207ENST00000496318 SUPT16HQ9Y5B9 1047 aaKnown RBP13.91□□□□□ -0.18
HLA-DQA1-207ENST00000496318 ROBO3Q96MS0 1386 aa13.91□□□□□ -0.18
HLA-DQA1-207ENST00000496318 SZT2Q5T011 3432 aa13.9□□□□□ -0.18
HLA-DQA1-207ENST00000496318 LCTP09848 1927 aa13.9□□□□□ -0.18
HLA-DQA1-207ENST00000496318 A0A0D9SFI3 127 aa13.9□□□□□ -0.18
HLA-DQA1-207ENST00000496318 ERC2O15083 957 aa13.9□□□□□ -0.18
HLA-DQA1-207ENST00000496318 HMGCRP04035 888 aa13.9□□□□□ -0.18
HLA-DQA1-207ENST00000496318 GJA8P48165 433 aa13.9□□□□□ -0.18
HLA-DQA1-207ENST00000496318 MORN1Q5T089 497 aa13.9□□□□□ -0.18
HLA-DQA1-207ENST00000496318 PLEKHH3Q7Z736 793 aa13.9□□□□□ -0.18
HLA-DQA1-207ENST00000496318 AMOTL1Q8IY63 956 aa13.9□□□□□ -0.18
HLA-DQA1-207ENST00000496318 IFNL3Q8IZI9 196 aa13.9□□□□□ -0.18
HLA-DQA1-207ENST00000496318 PXYLP1Q8TE99 480 aa13.9□□□□□ -0.18
HLA-DQA1-207ENST00000496318 DDRGK1Q96HY6 314 aa13.9□□□□□ -0.18
HLA-DQA1-207ENST00000496318 FAM227BQ96M60 508 aa13.9□□□□□ -0.18
HLA-DQA1-207ENST00000496318 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.9□□□□□ -0.18
HLA-DQA1-207ENST00000496318 VCPKMTQ9H867 229 aa13.9□□□□□ -0.18
HLA-DQA1-207ENST00000496318 RABGAP1Q9Y3P9 1069 aa13.9□□□□□ -0.18
HLA-DQA1-207ENST00000496318 FLOT1O75955 427 aa13.89□□□□□ -0.19
HLA-DQA1-207ENST00000496318 FARP2O94887 1054 aaPredicted RBP13.89□□□□□ -0.19
HLA-DQA1-207ENST00000496318 PRKAR2AP13861 404 aaKnown RBP13.89□□□□□ -0.19
HLA-DQA1-207ENST00000496318 CCND3P30281 292 aaPredicted RBP13.89□□□□□ -0.19
HLA-DQA1-207ENST00000496318 CTDSPL2Q05D32 466 aa13.89□□□□□ -0.19
HLA-DQA1-207ENST00000496318 PLS1Q14651 629 aa13.89□□□□□ -0.19
HLA-DQA1-207ENST00000496318 FAM47AQ5JRC9 791 aa13.89□□□□□ -0.19
HLA-DQA1-207ENST00000496318 FAM83BQ5T0W9 1011 aa13.89□□□□□ -0.19
HLA-DQA1-207ENST00000496318 CCAR1Q8IX12 1150 aaKnown RBP13.89□□□□□ -0.19
HLA-DQA1-207ENST00000496318 NPLOC4Q8TAT6 608 aa13.89□□□□□ -0.19
HLA-DQA1-207ENST00000496318 USP6NLQ92738 828 aa13.89□□□□□ -0.19
HLA-DQA1-207ENST00000496318 NUDT12Q9BQG2 462 aa13.89□□□□□ -0.19
HLA-DQA1-207ENST00000496318 MOV10L1Q9BXT6 1211 aaKnown RBP13.89□□□□□ -0.19
HLA-DQA1-207ENST00000496318 ARHGEF10LQ9HCE6 1279 aa13.89□□□□□ -0.19
HLA-DQA1-207ENST00000496318 CWC22Q9HCG8 908 aaKnown RBP13.89□□□□□ -0.19
HLA-DQA1-207ENST00000496318 PAK6Q9NQU5 681 aaPredicted RBP13.89□□□□□ -0.19
HLA-DQA1-207ENST00000496318 TMX2Q9Y320 296 aa13.89□□□□□ -0.19
HLA-DQA1-207ENST00000496318 MYH6P13533 1939 aa13.89□□□□□ -0.19
HLA-DQA1-207ENST00000496318 SGPL1O95470 568 aa13.88□□□□□ -0.19
HLA-DQA1-207ENST00000496318 MAPK4P31152 587 aa13.88□□□□□ -0.19
HLA-DQA1-207ENST00000496318 CACNB2Q08289 660 aaPredicted RBP13.88□□□□□ -0.19
HLA-DQA1-207ENST00000496318 SBK1Q52WX2 424 aa13.88□□□□□ -0.19
HLA-DQA1-207ENST00000496318 UBE2Q1Q7Z7E8 422 aa13.88□□□□□ -0.19
HLA-DQA1-207ENST00000496318 LRRC47Q8N1G4 583 aaKnown RBP13.88□□□□□ -0.19
HLA-DQA1-207ENST00000496318 NKX2-3Q8TAU0 364 aa13.88□□□□□ -0.19
HLA-DQA1-207ENST00000496318 H0YGN5 161 aa13.87□□□□□ -0.19
HLA-DQA1-207ENST00000496318 TFRCP02786 760 aaKnown RBP13.87□□□□□ -0.19
HLA-DQA1-207ENST00000496318 ZFYP08048 801 aaPredicted RBP13.87□□□□□ -0.19
HLA-DQA1-207ENST00000496318 ZKSCAN1P17029 563 aaPredicted RBP13.87□□□□□ -0.19
HLA-DQA1-207ENST00000496318 DSG3P32926 999 aa13.87□□□□□ -0.19
HLA-DQA1-207ENST00000496318 NMIQ13287 307 aaPredicted RBP13.87□□□□□ -0.19
HLA-DQA1-207ENST00000496318 LBX2Q6XYB7 198 aa13.87□□□□□ -0.19
HLA-DQA1-207ENST00000496318 ZNF589Q86UQ0 364 aaPredicted RBP13.87□□□□□ -0.19
HLA-DQA1-207ENST00000496318 SMC5Q8IY18 1101 aa13.87□□□□□ -0.19
HLA-DQA1-207ENST00000496318 GCC1Q96CN9 775 aa13.87□□□□□ -0.19
HLA-DQA1-207ENST00000496318 CCDC17Q96LX7 622 aa13.87□□□□□ -0.19
HLA-DQA1-207ENST00000496318 MKNK2Q9HBH9 465 aa13.87□□□□□ -0.19
HLA-DQA1-207ENST00000496318 ZBTB47Q9UFB7 747 aaPredicted RBP13.87□□□□□ -0.19
HLA-DQA1-207ENST00000496318 STAP2Q9UGK3 403 aa13.87□□□□□ -0.19
HLA-DQA1-207ENST00000496318 PATL2C9JE40 543 aaKnown RBP13.86□□□□□ -0.19
HLA-DQA1-207ENST00000496318 NMT2O60551 498 aa13.86□□□□□ -0.19
HLA-DQA1-207ENST00000496318 ERCC3P19447 782 aa13.86□□□□□ -0.19
HLA-DQA1-207ENST00000496318 RGS2P41220 211 aa13.86□□□□□ -0.19
HLA-DQA1-207ENST00000496318 MNX1P50219 401 aaPredicted RBP13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms