RNA–Protein interactions for RNA: ENST00000496205.1

CLK1-214, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 480 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-214ENST00000496205 LRRN2O75325 713 aa6.46□□□□□ -1.38
CLK1-214ENST00000496205 KRTAP10-2P60368 255 aa6.46□□□□□ -1.38
CLK1-214ENST00000496205 SSPNQ14714 243 aa6.46□□□□□ -1.38
CLK1-214ENST00000496205 NR0B2Q15466 257 aa6.46□□□□□ -1.38
CLK1-214ENST00000496205 MCATQ8IVS2 390 aaKnown RBP6.46□□□□□ -1.38
CLK1-214ENST00000496205 DTWD2Q8NBA8 298 aa6.46□□□□□ -1.38
CLK1-214ENST00000496205 ACSF2Q96CM8 615 aaPredicted RBP6.46□□□□□ -1.38
CLK1-214ENST00000496205 CWC22Q9HCG8 908 aaKnown RBP6.46□□□□□ -1.38
CLK1-214ENST00000496205 KCTD3Q9Y597 815 aa6.46□□□□□ -1.38
CLK1-214ENST00000496205 FITM1A5D6W6 292 aa6.45□□□□□ -1.38
CLK1-214ENST00000496205 TMEM132EQ6IEE7 984 aa6.45□□□□□ -1.38
CLK1-214ENST00000496205 PANK1Q8TE04 598 aa6.45□□□□□ -1.38
CLK1-214ENST00000496205 PSPNO60542 156 aa6.44□□□□□ -1.38
CLK1-214ENST00000496205 PDE6BP35913 854 aa6.44□□□□□ -1.38
CLK1-214ENST00000496205 RPS26P62854 115 aaKnown RBP6.44□□□□□ -1.38
CLK1-214ENST00000496205 TCERG1LQ5VWI1 586 aa6.44□□□□□ -1.38
CLK1-214ENST00000496205 UPK3BL1B0FP48 263 aa6.43□□□□□ -1.38
CLK1-214ENST00000496205 UPK3BL2E5RIL1 263 aa6.43□□□□□ -1.38
CLK1-214ENST00000496205 EFEMP2O95967 443 aa6.43□□□□□ -1.38
CLK1-214ENST00000496205 LTKP29376 864 aa6.43□□□□□ -1.38
CLK1-214ENST00000496205 ZNF385BQ569K4 471 aa6.43□□□□□ -1.38
CLK1-214ENST00000496205 AGMOQ6ZNB7 445 aa6.43□□□□□ -1.38
CLK1-214ENST00000496205 DHX38Q92620 1227 aaKnown RBP6.43□□□□□ -1.38
CLK1-214ENST00000496205 GPR160Q9UJ42 338 aa6.43□□□□□ -1.38
CLK1-214ENST00000496205 CORINQ9Y5Q5 1042 aa6.43□□□□□ -1.38
CLK1-214ENST00000496205 UNCXA6NJT0 531 aa6.42□□□□□ -1.38
CLK1-214ENST00000496205 NOTOA8MTQ0 251 aa6.42□□□□□ -1.38
CLK1-214ENST00000496205 TEKQ02763 1124 aa6.42□□□□□ -1.38
CLK1-214ENST00000496205 NFIXQ14938 502 aa6.42□□□□□ -1.38
CLK1-214ENST00000496205 CCDC85BQ15834 202 aaPredicted RBP6.42□□□□□ -1.38
CLK1-214ENST00000496205 MAP3K11Q16584 847 aa6.42□□□□□ -1.38
CLK1-214ENST00000496205 XYLT2Q9H1B5 865 aa6.42□□□□□ -1.38
CLK1-214ENST00000496205 SHISA3A0PJX4 238 aa6.41□□□□□ -1.38
CLK1-214ENST00000496205 SYN1P17600 705 aa6.41□□□□□ -1.38
CLK1-214ENST00000496205 RBM25P49756 843 aaKnown RBP6.41□□□□□ -1.38
CLK1-214ENST00000496205 SNX17Q15036 470 aa6.41□□□□□ -1.38
CLK1-214ENST00000496205 SPPL2CQ8IUH8 684 aa6.41□□□□□ -1.38
CLK1-214ENST00000496205 SIRT2Q8IXJ6 389 aa6.41□□□□□ -1.38
CLK1-214ENST00000496205 LINC01599Q8WXQ3 324 aa6.41□□□□□ -1.38
CLK1-214ENST00000496205 ASB16Q96NS5 453 aa6.41□□□□□ -1.38
CLK1-214ENST00000496205 G6PC3Q9BUM1 346 aa6.41□□□□□ -1.38
CLK1-214ENST00000496205 RTEL1Q9NZ71 1219 aa6.41□□□□□ -1.38
CLK1-214ENST00000496205 ADAM30Q9UKF2 790 aa6.41□□□□□ -1.38
CLK1-214ENST00000496205 KCNH3Q9ULD8 1083 aa6.41□□□□□ -1.38
CLK1-214ENST00000496205 OTOL1A6NHN0 477 aaPredicted RBP6.4□□□□□ -1.38
CLK1-214ENST00000496205 TFE3P19532 575 aaPredicted RBP6.4□□□□□ -1.38
CLK1-214ENST00000496205 PI3P19957 117 aa6.4□□□□□ -1.38
CLK1-214ENST00000496205 LMNB1P20700 586 aa6.4□□□□□ -1.38
CLK1-214ENST00000496205 LIG3P49916 1009 aa6.4□□□□□ -1.38
CLK1-214ENST00000496205 ATP2B2Q01814 1243 aa6.4□□□□□ -1.38
CLK1-214ENST00000496205 PDE4BQ07343 736 aa6.4□□□□□ -1.38
CLK1-214ENST00000496205 SKOR2Q2VWA4 1001 aaPredicted RBP6.4□□□□□ -1.38
CLK1-214ENST00000496205 ZSCAN29Q8IWY8 852 aaPredicted RBP6.4□□□□□ -1.38
CLK1-214ENST00000496205 CYB5D2Q8WUJ1 264 aa6.4□□□□□ -1.38
CLK1-214ENST00000496205 ZNF281Q9Y2X9 895 aa6.4□□□□□ -1.38
CLK1-214ENST00000496205 ANKRD33BA6NCL7 494 aa6.39□□□□□ -1.39
CLK1-214ENST00000496205 P4HBP07237 508 aaKnown RBP6.39□□□□□ -1.39
CLK1-214ENST00000496205 TAGLNQ01995 201 aaKnown RBP6.39□□□□□ -1.39
CLK1-214ENST00000496205 RPL6Q02878 288 aaKnown RBP6.39□□□□□ -1.39
CLK1-214ENST00000496205 TSNAXIP1Q2TAA8 658 aa6.39□□□□□ -1.39
CLK1-214ENST00000496205 GGNQ86UU5 652 aa6.39□□□□□ -1.39
CLK1-214ENST00000496205 CXorf38Q8TB03 319 aa6.39□□□□□ -1.39
CLK1-214ENST00000496205 JARID2Q92833 1246 aaPredicted RBP6.39□□□□□ -1.39
CLK1-214ENST00000496205 DACT3Q96B18 629 aaPredicted RBP6.39□□□□□ -1.39
CLK1-214ENST00000496205 MIR1-1HGQ9H1L0 117 aa6.39□□□□□ -1.39
CLK1-214ENST00000496205 EPB41L4AQ9HCS5 686 aaPredicted RBP6.39□□□□□ -1.39
CLK1-214ENST00000496205 MBD1Q9UIS9 605 aaPredicted RBP6.39□□□□□ -1.39
CLK1-214ENST00000496205 RBM47A0AV96 593 aaKnown RBP6.38□□□□□ -1.39
CLK1-214ENST00000496205 RFXAPO00287 272 aa6.38□□□□□ -1.39
CLK1-214ENST00000496205 EPHB3P54753 998 aa6.38□□□□□ -1.39
CLK1-214ENST00000496205 NFKB2Q00653 900 aa6.38□□□□□ -1.39
CLK1-214ENST00000496205 CHRNEQ04844 493 aa6.38□□□□□ -1.39
CLK1-214ENST00000496205 DBX2Q6ZNG2 339 aa6.38□□□□□ -1.39
CLK1-214ENST00000496205 NLRX1Q86UT6 975 aa6.38□□□□□ -1.39
CLK1-214ENST00000496205 TMEM151BQ8IW70 566 aa6.38□□□□□ -1.39
CLK1-214ENST00000496205 ANKS4BQ8N8V4 417 aa6.38□□□□□ -1.39
CLK1-214ENST00000496205 RNF141Q8WVD5 230 aa6.38□□□□□ -1.39
CLK1-214ENST00000496205 RNF19AQ9NV58 838 aa6.38□□□□□ -1.39
CLK1-214ENST00000496205 OR14I1A6ND48 311 aa6.37□□□□□ -1.39
CLK1-214ENST00000496205 LDHBP07195 334 aaKnown RBP6.37□□□□□ -1.39
CLK1-214ENST00000496205 PLCG1P19174 1290 aa6.37□□□□□ -1.39
CLK1-214ENST00000496205 EIF4BP23588 611 aaKnown RBP6.37□□□□□ -1.39
CLK1-214ENST00000496205 SRSF3P84103 164 aaKnown RBP6.37□□□□□ -1.39
CLK1-214ENST00000496205 ADGRF1Q5T601 910 aa6.37□□□□□ -1.39
CLK1-214ENST00000496205 FAM13CQ8NE31 585 aa6.37□□□□□ -1.39
CLK1-214ENST00000496205 FEZF2Q8TBJ5 459 aa6.37□□□□□ -1.39
CLK1-214ENST00000496205 SYTL4Q96C24 671 aaPredicted RBP6.37□□□□□ -1.39
CLK1-214ENST00000496205 TLR6Q9Y2C9 796 aa6.37□□□□□ -1.39
CLK1-214ENST00000496205 DUSP4Q13115 394 aa6.36□□□□□ -1.39
CLK1-214ENST00000496205 VMACQ2NL98 169 aa6.36□□□□□ -1.39
CLK1-214ENST00000496205 KRTAP5-3Q6L8H2 238 aa6.36□□□□□ -1.39
CLK1-214ENST00000496205 SIGLEC10Q96LC7 697 aa6.36□□□□□ -1.39
CLK1-214ENST00000496205 KREMEN1Q96MU8 473 aa6.36□□□□□ -1.39
CLK1-214ENST00000496205 FRMD6Q96NE9 622 aa6.36□□□□□ -1.39
CLK1-214ENST00000496205 CNTD2Q9H8S5 307 aa6.36□□□□□ -1.39
CLK1-214ENST00000496205 IRAK3Q9Y616 596 aa6.36□□□□□ -1.39
CLK1-214ENST00000496205 USP2O75604 605 aaPredicted RBP6.35□□□□□ -1.39
CLK1-214ENST00000496205 SASH1O94885 1247 aa6.35□□□□□ -1.39
CLK1-214ENST00000496205 SDHBP21912 280 aa6.35□□□□□ -1.39
CLK1-214ENST00000496205 GNA15P30679 374 aa6.35□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms