RNA–Protein interactions for RNA: ENST00000496172.5

ERGIC3-219, Transcript of ERGIC and golgi 3, humanhuman

TSL 2

Gene ERGIC3, Length 781 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC3-219ENST00000496172 KIAA1683Q9H0B3 1180 aa12.56□□□□□ -0.4
ERGIC3-219ENST00000496172 ARPP21Q9UBL0 812 aaPredicted RBP12.56□□□□□ -0.4
ERGIC3-219ENST00000496172 PFASO15067 1338 aa12.56□□□□□ -0.4
ERGIC3-219ENST00000496172 MYH7P12883 1935 aa12.55□□□□□ -0.4
ERGIC3-219ENST00000496172 COL6A1P12109 1028 aa12.55□□□□□ -0.4
ERGIC3-219ENST00000496172 SEPT2Q15019 361 aa12.55□□□□□ -0.4
ERGIC3-219ENST00000496172 GIMAP6Q6P9H5 292 aa12.55□□□□□ -0.4
ERGIC3-219ENST00000496172 PI4K2BQ8TCG2 481 aa12.55□□□□□ -0.4
ERGIC3-219ENST00000496172 OTUD7AQ8TE49 926 aaPredicted RBP12.55□□□□□ -0.4
ERGIC3-219ENST00000496172 DYNLL2Q96FJ2 89 aa12.55□□□□□ -0.4
ERGIC3-219ENST00000496172 C12orf42Q96LP6 360 aa12.55□□□□□ -0.4
ERGIC3-219ENST00000496172 P2RX7Q99572 595 aaKnown RBP12.55□□□□□ -0.4
ERGIC3-219ENST00000496172 HMX1Q9NP08 348 aaPredicted RBP12.55□□□□□ -0.4
ERGIC3-219ENST00000496172 EMILIN3Q9NT22 766 aa12.55□□□□□ -0.4
ERGIC3-219ENST00000496172 LTBP2Q14767 1821 aa12.55□□□□□ -0.4
ERGIC3-219ENST00000496172 FRMPD3Q5JV73 1810 aa12.55□□□□□ -0.4
ERGIC3-219ENST00000496172 USP17L15C9J2P7 530 aa12.54□□□□□ -0.4
ERGIC3-219ENST00000496172 USP17L13C9JLJ4 530 aa12.54□□□□□ -0.4
ERGIC3-219ENST00000496172 USP17L11C9JVI0 530 aa12.54□□□□□ -0.4
ERGIC3-219ENST00000496172 USP17L18D6R9N7 530 aa12.54□□□□□ -0.4
ERGIC3-219ENST00000496172 USP17L22D6RA61 530 aa12.54□□□□□ -0.4
ERGIC3-219ENST00000496172 USP17L17D6RBQ6 530 aa12.54□□□□□ -0.4
ERGIC3-219ENST00000496172 USP17L19D6RCP7 530 aa12.54□□□□□ -0.4
ERGIC3-219ENST00000496172 USP17L20D6RJB6 530 aa12.54□□□□□ -0.4
ERGIC3-219ENST00000496172 APPP05067 770 aa12.54□□□□□ -0.4
ERGIC3-219ENST00000496172 CDK8P49336 464 aa12.54□□□□□ -0.4
ERGIC3-219ENST00000496172 HERVK_113P62684 666 aa12.54□□□□□ -0.4
ERGIC3-219ENST00000496172 EVX2Q03828 476 aa12.54□□□□□ -0.4
ERGIC3-219ENST00000496172 USP17L24Q0WX57 530 aa12.54□□□□□ -0.4
ERGIC3-219ENST00000496172 MAP3K21Q5TCX8 1036 aa12.54□□□□□ -0.4
ERGIC3-219ENST00000496172 CTR9Q6PD62 1173 aa12.54□□□□□ -0.4
ERGIC3-219ENST00000496172 CCAR1Q8IX12 1150 aaKnown RBP12.54□□□□□ -0.4
ERGIC3-219ENST00000496172 SLC44A5Q8NCS7 719 aa12.54□□□□□ -0.4
ERGIC3-219ENST00000496172 GPRC5AQ8NFJ5 357 aa12.54□□□□□ -0.4
ERGIC3-219ENST00000496172 OSBP2Q969R2 916 aa12.54□□□□□ -0.4
ERGIC3-219ENST00000496172 NACAP1Q9BZK3 213 aa12.54□□□□□ -0.4
ERGIC3-219ENST00000496172 SH2D4AQ9H788 454 aa12.54□□□□□ -0.4
ERGIC3-219ENST00000496172 ARHGEF10LQ9HCE6 1279 aa12.54□□□□□ -0.4
ERGIC3-219ENST00000496172 MORF4L1Q9UBU8 362 aa12.54□□□□□ -0.4
ERGIC3-219ENST00000496172 SUPT16HQ9Y5B9 1047 aaKnown RBP12.54□□□□□ -0.4
ERGIC3-219ENST00000496172 DNAH12Q6ZR08 3092 aa12.53□□□□□ -0.4
ERGIC3-219ENST00000496172 CYP2D7A0A087X1C5 515 aa12.53□□□□□ -0.4
ERGIC3-219ENST00000496172 MINDY4BA8MYZ0 360 aa12.53□□□□□ -0.4
ERGIC3-219ENST00000496172 GPAA1O43292 621 aa12.53□□□□□ -0.4
ERGIC3-219ENST00000496172 GUCY1A2P33402 732 aa12.53□□□□□ -0.4
ERGIC3-219ENST00000496172 TDO2P48775 406 aa12.53□□□□□ -0.4
ERGIC3-219ENST00000496172 SBK1Q52WX2 424 aa12.53□□□□□ -0.4
ERGIC3-219ENST00000496172 ZNF697Q5TEC3 545 aa12.53□□□□□ -0.4
ERGIC3-219ENST00000496172 C16orf86Q6ZW13 317 aa12.53□□□□□ -0.4
ERGIC3-219ENST00000496172 EXOC6Q8TAG9 804 aa12.53□□□□□ -0.4
ERGIC3-219ENST00000496172 ACER1Q8TDN7 264 aa12.53□□□□□ -0.4
ERGIC3-219ENST00000496172 SYMPKQ92797 1274 aaKnown RBP12.53□□□□□ -0.4
ERGIC3-219ENST00000496172 EVI5LQ96CN4 794 aa12.53□□□□□ -0.4
ERGIC3-219ENST00000496172 MKNK2Q9HBH9 465 aa12.53□□□□□ -0.4
ERGIC3-219ENST00000496172 ZNF287Q9HBT7 754 aa12.53□□□□□ -0.4
ERGIC3-219ENST00000496172 GSG1L2A8MUP6 293 aa12.52□□□□□ -0.41
ERGIC3-219ENST00000496172 PATL2C9JE40 543 aaKnown RBP12.52□□□□□ -0.41
ERGIC3-219ENST00000496172 M0R2C6 588 aa12.52□□□□□ -0.41
ERGIC3-219ENST00000496172 AKR1B1P15121 316 aa12.52□□□□□ -0.41
ERGIC3-219ENST00000496172 VCAM1P19320 739 aa12.52□□□□□ -0.41
ERGIC3-219ENST00000496172 PDE1AP54750 535 aa12.52□□□□□ -0.41
ERGIC3-219ENST00000496172 ICA1Q05084 483 aa12.52□□□□□ -0.41
ERGIC3-219ENST00000496172 B4GALNT3Q6L9W6 998 aa12.52□□□□□ -0.41
ERGIC3-219ENST00000496172 CATSPERGQ6ZRH7 1159 aa12.52□□□□□ -0.41
ERGIC3-219ENST00000496172 RPAP3Q9H6T3 665 aaPredicted RBP12.52□□□□□ -0.41
ERGIC3-219ENST00000496172 CWC22Q9HCG8 908 aaKnown RBP12.52□□□□□ -0.41
ERGIC3-219ENST00000496172 GJD2Q9UKL4 321 aa12.52□□□□□ -0.41
ERGIC3-219ENST00000496172 SLC3A2P08195 630 aaKnown RBP12.51□□□□□ -0.41
ERGIC3-219ENST00000496172 MAPK4P31152 587 aa12.51□□□□□ -0.41
ERGIC3-219ENST00000496172 ERVK-9P63128 1117 aa12.51□□□□□ -0.41
ERGIC3-219ENST00000496172 ERVK-24P63145 666 aa12.51□□□□□ -0.41
ERGIC3-219ENST00000496172 CCNA1P78396 465 aa12.51□□□□□ -0.41
ERGIC3-219ENST00000496172 SMC5Q8IY18 1101 aa12.51□□□□□ -0.41
ERGIC3-219ENST00000496172 MAFAQ8NHW3 353 aaPredicted RBP12.51□□□□□ -0.41
ERGIC3-219ENST00000496172 PAGR1Q9BTK6 254 aa12.51□□□□□ -0.41
ERGIC3-219ENST00000496172 LNPKQ9C0E8 428 aa12.51□□□□□ -0.41
ERGIC3-219ENST00000496172 KANSL2Q9H9L4 492 aa12.51□□□□□ -0.41
ERGIC3-219ENST00000496172 RBPJLQ9UBG7 517 aa12.51□□□□□ -0.41
ERGIC3-219ENST00000496172 RABGAP1Q9Y3P9 1069 aa12.51□□□□□ -0.41
ERGIC3-219ENST00000496172 SALL3Q9BXA9 1300 aa12.51□□□□□ -0.41
ERGIC3-219ENST00000496172 BAZ2AQ9UIF9 1905 aaKnown RBP12.5□□□□□ -0.41
ERGIC3-219ENST00000496172 NCOR1O75376 2440 aa12.5□□□□□ -0.41
ERGIC3-219ENST00000496172 A0A1W2PRG0 241 aa12.5□□□□□ -0.41
ERGIC3-219ENST00000496172 COL9A1P20849 921 aa12.5□□□□□ -0.41
ERGIC3-219ENST00000496172 ATP2B2Q01814 1243 aa12.5□□□□□ -0.41
ERGIC3-219ENST00000496172 ZMYM1Q5SVZ6 1142 aa12.5□□□□□ -0.41
ERGIC3-219ENST00000496172 CHD1LQ86WJ1 897 aa12.5□□□□□ -0.41
ERGIC3-219ENST00000496172 TICAM2Q86XR7 235 aa12.5□□□□□ -0.41
ERGIC3-219ENST00000496172 IFNL3Q8IZI9 196 aa12.5□□□□□ -0.41
ERGIC3-219ENST00000496172 ZNF444Q8N0Y2 327 aaPredicted RBP12.5□□□□□ -0.41
ERGIC3-219ENST00000496172 TRIB2Q92519 343 aa12.5□□□□□ -0.41
ERGIC3-219ENST00000496172 LPAR1Q92633 364 aa12.5□□□□□ -0.41
ERGIC3-219ENST00000496172 TANGO6Q9C0B7 1094 aa12.5□□□□□ -0.41
ERGIC3-219ENST00000496172 TXNRD2Q9NNW7 524 aa12.5□□□□□ -0.41
ERGIC3-219ENST00000496172 HOXC10Q9NYD6 342 aa12.5□□□□□ -0.41
ERGIC3-219ENST00000496172 TMX2Q9Y320 296 aa12.5□□□□□ -0.41
ERGIC3-219ENST00000496172 TRIM6-TRIM34B2RNG4 842 aa12.49□□□□□ -0.41
ERGIC3-219ENST00000496172 IGHDP01880 384 aa12.49□□□□□ -0.41
ERGIC3-219ENST00000496172 XRCC5P13010 732 aaKnown RBP12.49□□□□□ -0.41
ERGIC3-219ENST00000496172 MDM2Q00987 491 aaPredicted RBP12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms