RNA–Protein interactions for RNA: ENST00000496136.5

ECHDC3-205, Transcript of enoyl-CoA hydratase domain containing 3, humanhuman

TSL 1 (best)

Gene ECHDC3, Length 1,767 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC3-205ENST00000496136 LARGE1O95461 756 aa25.49■■□□□ 1.67
ECHDC3-205ENST00000496136 SPP2Q13103 211 aa25.49■■□□□ 1.67
ECHDC3-205ENST00000496136 ERO1BQ86YB8 467 aa25.49■■□□□ 1.67
ECHDC3-205ENST00000496136 RAB11FIP4Q86YS3 637 aa25.49■■□□□ 1.67
ECHDC3-205ENST00000496136 ZNF280CQ8ND82 737 aa25.49■■□□□ 1.67
ECHDC3-205ENST00000496136 CNKSR2Q8WXI2 1034 aa25.49■■□□□ 1.67
ECHDC3-205ENST00000496136 SLC10A4Q96EP9 437 aa25.49■■□□□ 1.67
ECHDC3-205ENST00000496136 TMX3Q96JJ7 454 aa25.49■■□□□ 1.67
ECHDC3-205ENST00000496136 ZSCAN31Q96LW9 406 aaPredicted RBP25.49■■□□□ 1.67
ECHDC3-205ENST00000496136 AS3MTQ9HBK9 375 aa25.49■■□□□ 1.67
ECHDC3-205ENST00000496136 SYNPO2Q9UMS6 1093 aa25.49■■□□□ 1.67
ECHDC3-205ENST00000496136 AFG3L2Q9Y4W6 797 aa25.49■■□□□ 1.67
ECHDC3-205ENST00000496136 ZBTB43O43298 467 aa25.49■■□□□ 1.67
ECHDC3-205ENST00000496136 RXRAP19793 462 aa25.49■■□□□ 1.67
ECHDC3-205ENST00000496136 PPATQ06203 517 aa25.48■■□□□ 1.67
ECHDC3-205ENST00000496136 STK3Q13188 491 aa25.48■■□□□ 1.67
ECHDC3-205ENST00000496136 MICU3Q86XE3 530 aa25.48■■□□□ 1.67
ECHDC3-205ENST00000496136 HSCBQ8IWL3 235 aa25.48■■□□□ 1.67
ECHDC3-205ENST00000496136 NUP133Q8WUM0 1156 aa25.48■■□□□ 1.67
ECHDC3-205ENST00000496136 MTMR7Q9Y216 660 aa25.48■■□□□ 1.67
ECHDC3-205ENST00000496136 SPDYE5A6NIY4 337 aa25.47■■□□□ 1.67
ECHDC3-205ENST00000496136 GOLGA8BA8MQT2 603 aa25.47■■□□□ 1.67
ECHDC3-205ENST00000496136 USP17L10C9JJH3 530 aa25.47■■□□□ 1.67
ECHDC3-205ENST00000496136 F5H6K3 240 aa25.47■■□□□ 1.67
ECHDC3-205ENST00000496136 K7ELQ4 463 aaPredicted RBP25.47■■□□□ 1.67
ECHDC3-205ENST00000496136 DDAH1O94760 285 aa25.47■■□□□ 1.67
ECHDC3-205ENST00000496136 KLRC3Q07444 240 aa25.47■■□□□ 1.67
ECHDC3-205ENST00000496136 RCAN1P53805 252 aa25.46■■□□□ 1.67
ECHDC3-205ENST00000496136 HUNKP57058 714 aa25.46■■□□□ 1.67
ECHDC3-205ENST00000496136 SAPCD2Q86UD0 394 aa25.46■■□□□ 1.67
ECHDC3-205ENST00000496136 FANCBQ8NB91 859 aa25.46■■□□□ 1.67
ECHDC3-205ENST00000496136 GMCL1P1Q8NEA9 526 aa25.46■■□□□ 1.67
ECHDC3-205ENST00000496136 CHMP4CQ96CF2 233 aa25.46■■□□□ 1.67
ECHDC3-205ENST00000496136 KIAA1683Q9H0B3 1180 aa25.46■■□□□ 1.67
ECHDC3-205ENST00000496136 SLKQ9H2G2 1235 aaPredicted RBP25.46■■□□□ 1.67
ECHDC3-205ENST00000496136 SH2D4AQ9H788 454 aa25.46■■□□□ 1.67
ECHDC3-205ENST00000496136 SH2B1Q9NRF2 756 aaPredicted RBP25.46■■□□□ 1.67
ECHDC3-205ENST00000496136 TRIM75PA6NK02 468 aa25.46■■□□□ 1.67
ECHDC3-205ENST00000496136 PFKFB2O60825 505 aa25.46■■□□□ 1.67
ECHDC3-205ENST00000496136 CALM1P0DP23 149 aa25.46■■□□□ 1.67
ECHDC3-205ENST00000496136 CALM2P0DP24 149 aa25.46■■□□□ 1.67
ECHDC3-205ENST00000496136 CALM3P0DP25 149 aa25.46■■□□□ 1.67
ECHDC3-205ENST00000496136 BACE1P56817 501 aa25.46■■□□□ 1.67
ECHDC3-205ENST00000496136 CCT2P78371 535 aaKnown RBP25.46■■□□□ 1.67
ECHDC3-205ENST00000496136 CCDC144CPQ8IYA2 1237 aa25.46■■□□□ 1.67
ECHDC3-205ENST00000496136 NECAB1Q8N987 351 aa25.46■■□□□ 1.67
ECHDC3-205ENST00000496136 OPTNQ96CV9 577 aa25.46■■□□□ 1.67
ECHDC3-205ENST00000496136 OTUD5Q96G74 571 aa25.46■■□□□ 1.67
ECHDC3-205ENST00000496136 FEZ1Q99689 392 aa25.46■■□□□ 1.67
ECHDC3-205ENST00000496136 IRF6O14896 467 aa25.45■■□□□ 1.66
ECHDC3-205ENST00000496136 ZYXQ15942 572 aaKnown RBP25.45■■□□□ 1.66
ECHDC3-205ENST00000496136 KIAA1755Q5JYT7 1200 aa25.45■■□□□ 1.66
ECHDC3-205ENST00000496136 MAP3K14Q99558 947 aa25.45■■□□□ 1.66
ECHDC3-205ENST00000496136 VCPKMTQ9H867 229 aa25.45■■□□□ 1.66
ECHDC3-205ENST00000496136 TMEM88BA6NKF7 163 aa25.44■■□□□ 1.66
ECHDC3-205ENST00000496136 RAD21O60216 631 aa25.44■■□□□ 1.66
ECHDC3-205ENST00000496136 SNHG28P0DPA3 235 aa25.44■■□□□ 1.66
ECHDC3-205ENST00000496136 PDHBP11177 359 aa25.44■■□□□ 1.66
ECHDC3-205ENST00000496136 METAP2P50579 478 aaKnown RBP eCLIP25.44■■□□□ 1.66
ECHDC3-205ENST00000496136 SCRN1Q12765 414 aa25.44■■□□□ 1.66
ECHDC3-205ENST00000496136 MTMR2Q13614 643 aa25.44■■□□□ 1.66
ECHDC3-205ENST00000496136 SLFN13Q68D06 897 aa25.44■■□□□ 1.66
ECHDC3-205ENST00000496136 RASGRP2Q7LDG7 609 aa25.44■■□□□ 1.66
ECHDC3-205ENST00000496136 NCOA5Q9HCD5 579 aaKnown RBP25.44■■□□□ 1.66
ECHDC3-205ENST00000496136 GOPCQ9HD26 462 aa25.44■■□□□ 1.66
ECHDC3-205ENST00000496136 FAM217BQ9NTX9 383 aaPredicted RBP25.44■■□□□ 1.66
ECHDC3-205ENST00000496136 NDUFB10O96000 172 aa25.44■■□□□ 1.66
ECHDC3-205ENST00000496136 BECN1Q14457 450 aa25.44■■□□□ 1.66
ECHDC3-205ENST00000496136 USP17L2Q6R6M4 530 aa25.44■■□□□ 1.66
ECHDC3-205ENST00000496136 GOLGA8AA7E2F4 631 aa25.43■■□□□ 1.66
ECHDC3-205ENST00000496136 C19orf81C9J6K1 198 aa25.43■■□□□ 1.66
ECHDC3-205ENST00000496136 CDC27P30260 824 aa25.43■■□□□ 1.66
ECHDC3-205ENST00000496136 ADD1P35611 737 aaKnown RBP25.43■■□□□ 1.66
ECHDC3-205ENST00000496136 PPIL2Q13356 520 aa25.43■■□□□ 1.66
ECHDC3-205ENST00000496136 SPICE1Q8N0Z3 855 aa25.43■■□□□ 1.66
ECHDC3-205ENST00000496136 GTF3C6Q969F1 213 aa25.43■■□□□ 1.66
ECHDC3-205ENST00000496136 EMILIN3Q9NT22 766 aa25.43■■□□□ 1.66
ECHDC3-205ENST00000496136 TLL2Q9Y6L7 1015 aa25.43■■□□□ 1.66
ECHDC3-205ENST00000496136 USP14P54578 494 aa25.42■■□□□ 1.66
ECHDC3-205ENST00000496136 ST3GAL1Q11201 340 aa25.42■■□□□ 1.66
ECHDC3-205ENST00000496136 GRM4Q14833 912 aa25.42■■□□□ 1.66
ECHDC3-205ENST00000496136 PPP2R5BQ15173 497 aa25.42■■□□□ 1.66
ECHDC3-205ENST00000496136 CTCFLQ8NI51 663 aaPredicted RBP25.42■■□□□ 1.66
ECHDC3-205ENST00000496136 MAD2L2Q9UI95 211 aa25.42■■□□□ 1.66
ECHDC3-205ENST00000496136 GJA5P36382 358 aa25.41■■□□□ 1.66
ECHDC3-205ENST00000496136 SLC1A4P43007 532 aa25.41■■□□□ 1.66
ECHDC3-205ENST00000496136 DGKZQ13574 1117 aa25.41■■□□□ 1.66
ECHDC3-205ENST00000496136 RTN1Q16799 776 aa25.41■■□□□ 1.66
ECHDC3-205ENST00000496136 STAG2Q8N3U4 1231 aa25.41■■□□□ 1.66
ECHDC3-205ENST00000496136 GMCL1Q96IK5 515 aa25.41■■□□□ 1.66
ECHDC3-205ENST00000496136 NID2Q14112 1375 aa25.41■■□□□ 1.66
ECHDC3-205ENST00000496136 PALM3A6NDB9 673 aaPredicted RBP25.41■■□□□ 1.66
ECHDC3-205ENST00000496136 CXCL11O14625 94 aa25.41■■□□□ 1.66
ECHDC3-205ENST00000496136 PARP1P09874 1014 aaKnown RBP25.41■■□□□ 1.66
ECHDC3-205ENST00000496136 KIF5BP33176 963 aa25.41■■□□□ 1.66
ECHDC3-205ENST00000496136 HMGCS2P54868 508 aa25.41■■□□□ 1.66
ECHDC3-205ENST00000496136 CCDC83Q8IWF9 413 aa25.41■■□□□ 1.66
ECHDC3-205ENST00000496136 DCAF4Q8WV16 495 aa25.41■■□□□ 1.66
ECHDC3-205ENST00000496136 KCNH4Q9UQ05 1017 aa25.41■■□□□ 1.66
ECHDC3-205ENST00000496136 GOLGA8HP0CJ92 632 aa25.4■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 83.2 ms