RNA–Protein interactions for RNA: ENST00000496047.5

USP39-219, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 554 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-219ENST00000496047 USP17L21D6R901 530 aa7.98□□□□□ -1.13
USP39-219ENST00000496047 GOLGA6L19H0YKK7 550 aa7.98□□□□□ -1.13
USP39-219ENST00000496047 SPTLC2O15270 562 aa7.98□□□□□ -1.13
USP39-219ENST00000496047 HRO43593 1189 aa7.98□□□□□ -1.13
USP39-219ENST00000496047 TPM3P06753 285 aa7.98□□□□□ -1.13
USP39-219ENST00000496047 RXRAP19793 462 aa7.98□□□□□ -1.13
USP39-219ENST00000496047 KLRK1P26718 216 aa7.98□□□□□ -1.13
USP39-219ENST00000496047 PPP4CP60510 307 aa7.98□□□□□ -1.13
USP39-219ENST00000496047 KIF23Q02241 960 aaPredicted RBP7.98□□□□□ -1.13
USP39-219ENST00000496047 FAM160A1Q05DH4 1040 aa7.98□□□□□ -1.13
USP39-219ENST00000496047 MAP2K5Q13163 448 aa7.98□□□□□ -1.13
USP39-219ENST00000496047 RILPL1Q5EBL4 403 aa7.98□□□□□ -1.13
USP39-219ENST00000496047 ANO1Q5XXA6 986 aa7.98□□□□□ -1.13
USP39-219ENST00000496047 KRT40Q6A162 431 aa7.98□□□□□ -1.13
USP39-219ENST00000496047 ADALQ6DHV7 355 aa7.98□□□□□ -1.13
USP39-219ENST00000496047 FAM173BQ6P4H8 233 aa7.98□□□□□ -1.13
USP39-219ENST00000496047 CTR9Q6PD62 1173 aa7.98□□□□□ -1.13
USP39-219ENST00000496047 ADGRA1Q86SQ6 560 aa7.98□□□□□ -1.13
USP39-219ENST00000496047 RAB11FIP4Q86YS3 637 aa7.98□□□□□ -1.13
USP39-219ENST00000496047 CCDC144CPQ8IYA2 1237 aa7.98□□□□□ -1.13
USP39-219ENST00000496047 ZNF444Q8N0Y2 327 aaPredicted RBP7.98□□□□□ -1.13
USP39-219ENST00000496047 STK11IPQ8N1F8 1099 aa7.98□□□□□ -1.13
USP39-219ENST00000496047 MPNDQ8N594 471 aa7.98□□□□□ -1.13
USP39-219ENST00000496047 FSIP1Q8NA03 581 aa7.98□□□□□ -1.13
USP39-219ENST00000496047 FANCBQ8NB91 859 aa7.98□□□□□ -1.13
USP39-219ENST00000496047 FAM200AQ8TCP9 573 aa7.98□□□□□ -1.13
USP39-219ENST00000496047 MASTLQ96GX5 879 aa7.98□□□□□ -1.13
USP39-219ENST00000496047 USP28Q96RU2 1077 aa7.98□□□□□ -1.13
USP39-219ENST00000496047 ZKSCAN3Q9BRR0 538 aa7.98□□□□□ -1.13
USP39-219ENST00000496047 ZC3H12CQ9C0D7 883 aaKnown RBP7.98□□□□□ -1.13
USP39-219ENST00000496047 NAT10Q9H0A0 1025 aaKnown RBP7.98□□□□□ -1.13
USP39-219ENST00000496047 FOXP1Q9H334 677 aaPredicted RBP7.98□□□□□ -1.13
USP39-219ENST00000496047 STK32BQ9NY57 414 aa7.98□□□□□ -1.13
USP39-219ENST00000496047 IRS2Q9Y4H2 1338 aa7.98□□□□□ -1.13
USP39-219ENST00000496047 GREB1LQ9C091 1923 aaPredicted RBP7.97□□□□□ -1.13
USP39-219ENST00000496047 ADAMTSL1Q8N6G6 1762 aa7.97□□□□□ -1.13
USP39-219ENST00000496047 KLRG2A4D1S0 409 aaPredicted RBP7.97□□□□□ -1.13
USP39-219ENST00000496047 PPP6R2O75170 966 aa7.97□□□□□ -1.13
USP39-219ENST00000496047 MMP1P03956 469 aa7.97□□□□□ -1.13
USP39-219ENST00000496047 FGRP09769 529 aa7.97□□□□□ -1.13
USP39-219ENST00000496047 TSPY3P0CV98 308 aa7.97□□□□□ -1.13
USP39-219ENST00000496047 TSPY8P0CW00 308 aa7.97□□□□□ -1.13
USP39-219ENST00000496047 FDPSP14324 419 aaKnown RBP7.97□□□□□ -1.13
USP39-219ENST00000496047 CDC27P30260 824 aa7.97□□□□□ -1.13
USP39-219ENST00000496047 ADD1P35611 737 aaKnown RBP7.97□□□□□ -1.13
USP39-219ENST00000496047 BTDP43251 543 aa7.97□□□□□ -1.13
USP39-219ENST00000496047 PTPN5P54829 565 aa7.97□□□□□ -1.13
USP39-219ENST00000496047 DDR1Q08345 913 aa7.97□□□□□ -1.13
USP39-219ENST00000496047 STX1AQ16623 288 aa7.97□□□□□ -1.13
USP39-219ENST00000496047 MFSD14BQ5SR56 506 aa7.97□□□□□ -1.13
USP39-219ENST00000496047 DPP8Q6V1X1 898 aaPredicted RBP7.97□□□□□ -1.13
USP39-219ENST00000496047 AMIGO3Q86WK7 504 aa7.97□□□□□ -1.13
USP39-219ENST00000496047 TEX11Q8IYF3 940 aa7.97□□□□□ -1.13
USP39-219ENST00000496047 FAM177A1Q8N128 213 aaPredicted RBP7.97□□□□□ -1.13
USP39-219ENST00000496047 RNF214Q8ND24 703 aa7.97□□□□□ -1.13
USP39-219ENST00000496047 TBC1D16Q8TBP0 767 aa7.97□□□□□ -1.13
USP39-219ENST00000496047 PHKBQ93100 1093 aa7.97□□□□□ -1.13
USP39-219ENST00000496047 MAP3K14Q99558 947 aa7.97□□□□□ -1.13
USP39-219ENST00000496047 ANO10Q9NW15 660 aa7.97□□□□□ -1.13
USP39-219ENST00000496047 FAM13BQ9NYF5 915 aa7.97□□□□□ -1.13
USP39-219ENST00000496047 DDX52Q9Y2R4 599 aaKnown RBP eCLIP7.97□□□□□ -1.13
USP39-219ENST00000496047 ATP6V0A2Q9Y487 856 aa7.97□□□□□ -1.13
USP39-219ENST00000496047 FAM205AQ6ZU69 1335 aa7.97□□□□□ -1.13
USP39-219ENST00000496047 ATAD5Q96QE3 1844 aa7.96□□□□□ -1.13
USP39-219ENST00000496047 LOXHD1Q8IVV2 1947 aa7.96□□□□□ -1.13
USP39-219ENST00000496047 H0YIN7 160 aa7.96□□□□□ -1.14
USP39-219ENST00000496047 PRPF3O43395 683 aaKnown RBP7.96□□□□□ -1.14
USP39-219ENST00000496047 CUTAO60888 179 aa7.96□□□□□ -1.14
USP39-219ENST00000496047 HLA-DOAP06340 250 aa7.96□□□□□ -1.14
USP39-219ENST00000496047 LIG1P18858 919 aa7.96□□□□□ -1.14
USP39-219ENST00000496047 CALML3P27482 149 aa7.96□□□□□ -1.14
USP39-219ENST00000496047 KRT2P35908 639 aa7.96□□□□□ -1.14
USP39-219ENST00000496047 TYRO3Q06418 890 aa7.96□□□□□ -1.14
USP39-219ENST00000496047 SEC23AQ15436 765 aa7.96□□□□□ -1.14
USP39-219ENST00000496047 GRIPAP1Q4V328 841 aa7.96□□□□□ -1.14
USP39-219ENST00000496047 STYK1Q6J9G0 422 aa7.96□□□□□ -1.14
USP39-219ENST00000496047 DGKHQ86XP1 1220 aa7.96□□□□□ -1.14
USP39-219ENST00000496047 CEP57L1Q8IYX8 460 aa7.96□□□□□ -1.14
USP39-219ENST00000496047 CRACR2BQ8N4Y2 399 aaPredicted RBP7.96□□□□□ -1.14
USP39-219ENST00000496047 ENAHQ8N8S7 591 aaPredicted RBP7.96□□□□□ -1.14
USP39-219ENST00000496047 LINC00301Q8NCQ3 95 aa7.96□□□□□ -1.14
USP39-219ENST00000496047 SUPT20HQ8NEM7 779 aa7.96□□□□□ -1.14
USP39-219ENST00000496047 CCDC148Q8NFR7 591 aa7.96□□□□□ -1.14
USP39-219ENST00000496047 CCDC12Q8WUD4 166 aaPredicted RBP7.96□□□□□ -1.14
USP39-219ENST00000496047 CNKSR1Q969H4 720 aa7.96□□□□□ -1.14
USP39-219ENST00000496047 ZDHHC16Q969W1 377 aa7.96□□□□□ -1.14
USP39-219ENST00000496047 KCNK17Q96T54 332 aa7.96□□□□□ -1.14
USP39-219ENST00000496047 LZTS2Q9BRK4 669 aa7.96□□□□□ -1.14
USP39-219ENST00000496047 SDF4Q9BRK5 362 aa7.96□□□□□ -1.14
USP39-219ENST00000496047 MYL10Q9BUA6 226 aa7.96□□□□□ -1.14
USP39-219ENST00000496047 PCDHGA10Q9Y5H3 936 aa7.96□□□□□ -1.14
USP39-219ENST00000496047 SCN9AQ15858 1988 aa7.96□□□□□ -1.14
USP39-219ENST00000496047 UTRNP46939 3433 aa7.96□□□□□ -1.14
USP39-219ENST00000496047 MYH7BA7E2Y1 1941 aa7.95□□□□□ -1.14
USP39-219ENST00000496047 C10orf71Q711Q0 1435 aa7.95□□□□□ -1.14
USP39-219ENST00000496047 GPR75-ASB3A0A0A6YYF3 556 aa7.95□□□□□ -1.14
USP39-219ENST00000496047 BECN2A8MW95 431 aa7.95□□□□□ -1.14
USP39-219ENST00000496047 ESPNB1AK53 854 aa7.95□□□□□ -1.14
USP39-219ENST00000496047 DTNBO60941 627 aa7.95□□□□□ -1.14
USP39-219ENST00000496047 NR1I2O75469 434 aa7.95□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms