RNA–Protein interactions for RNA: ENST00000495952.5

SURF1-204, Transcript of SURF1, cytochrome c oxidase assembly factor, humanhuman

TSL 2

Gene SURF1, Length 931 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SURF1-204ENST00000495952 GNG11P61952 73 aa11.18□□□□□ -0.62
SURF1-204ENST00000495952 TROAPQ12815 778 aa11.18□□□□□ -0.62
SURF1-204ENST00000495952 BRD3Q15059 726 aa11.18□□□□□ -0.62
SURF1-204ENST00000495952 E2F4Q16254 413 aa11.18□□□□□ -0.62
SURF1-204ENST00000495952 CCDC178Q5BJE1 867 aa11.18□□□□□ -0.62
SURF1-204ENST00000495952 RASGRP2Q7LDG7 609 aa11.18□□□□□ -0.62
SURF1-204ENST00000495952 CEP112Q8N8E3 955 aa11.18□□□□□ -0.62
SURF1-204ENST00000495952 IQUBQ8NA54 791 aa11.18□□□□□ -0.62
SURF1-204ENST00000495952 ANKRD20A12PQ8NF67 263 aa11.18□□□□□ -0.62
SURF1-204ENST00000495952 HELBQ8NG08 1087 aaPredicted RBP11.18□□□□□ -0.62
SURF1-204ENST00000495952 CTCFLQ8NI51 663 aaPredicted RBP11.18□□□□□ -0.62
SURF1-204ENST00000495952 OXER1Q8TDS5 423 aa11.18□□□□□ -0.62
SURF1-204ENST00000495952 NUP133Q8WUM0 1156 aa11.18□□□□□ -0.62
SURF1-204ENST00000495952 SMARCC1Q92922 1105 aaPredicted RBP11.18□□□□□ -0.62
SURF1-204ENST00000495952 PAGE5Q96GU1 130 aa11.18□□□□□ -0.62
SURF1-204ENST00000495952 MED15Q96RN5 788 aa11.18□□□□□ -0.62
SURF1-204ENST00000495952 CARD6Q9BX69 1037 aa11.18□□□□□ -0.62
SURF1-204ENST00000495952 MAGEF1Q9HAY2 307 aa11.18□□□□□ -0.62
SURF1-204ENST00000495952 CABP5Q9NP86 173 aa11.18□□□□□ -0.62
SURF1-204ENST00000495952 RWDD2AQ9UIY3 292 aa11.18□□□□□ -0.62
SURF1-204ENST00000495952 KIF13BQ9NQT8 1826 aa11.17□□□□□ -0.62
SURF1-204ENST00000495952 UBE2Q2LH0YL09 131 aa11.17□□□□□ -0.62
SURF1-204ENST00000495952 FANCGO15287 622 aa11.17□□□□□ -0.62
SURF1-204ENST00000495952 KIF5BP33176 963 aa11.17□□□□□ -0.62
SURF1-204ENST00000495952 LONP1P36776 959 aaKnown RBP11.17□□□□□ -0.62
SURF1-204ENST00000495952 PPP1R2P41236 205 aa11.17□□□□□ -0.62
SURF1-204ENST00000495952 BCAMP50895 628 aa11.17□□□□□ -0.62
SURF1-204ENST00000495952 NPY5RQ15761 445 aa11.17□□□□□ -0.62
SURF1-204ENST00000495952 CAVIN4Q5BKX8 364 aa11.17□□□□□ -0.62
SURF1-204ENST00000495952 TEX35Q5T0J7 233 aa11.17□□□□□ -0.62
SURF1-204ENST00000495952 TMTC1Q8IUR5 882 aa11.17□□□□□ -0.62
SURF1-204ENST00000495952 ANKRD18AQ8IVF6 992 aa11.17□□□□□ -0.62
SURF1-204ENST00000495952 IGSF22Q8N9C0 903 aa11.17□□□□□ -0.62
SURF1-204ENST00000495952 HNRNPLLQ8WVV9 542 aaKnown RBP11.17□□□□□ -0.62
SURF1-204ENST00000495952 SYMPKQ92797 1274 aaKnown RBP11.17□□□□□ -0.62
SURF1-204ENST00000495952 DHX58Q96C10 678 aa11.17□□□□□ -0.62
SURF1-204ENST00000495952 ZKSCAN3Q9BRR0 538 aa11.17□□□□□ -0.62
SURF1-204ENST00000495952 INCENPQ9NQS7 918 aa11.17□□□□□ -0.62
SURF1-204ENST00000495952 SEC31BQ9NQW1 1179 aa11.17□□□□□ -0.62
SURF1-204ENST00000495952 SAMSN1Q9NSI8 373 aaKnown RBP11.17□□□□□ -0.62
SURF1-204ENST00000495952 ATP8A2Q9NTI2 1148 aa11.17□□□□□ -0.62
SURF1-204ENST00000495952 BSDC1Q9NW68 430 aaPredicted RBP11.17□□□□□ -0.62
SURF1-204ENST00000495952 ADGRG1Q9Y653 693 aa11.17□□□□□ -0.62
SURF1-204ENST00000495952 XDHP47989 1333 aa11.16□□□□□ -0.62
SURF1-204ENST00000495952 LY75O60449 1722 aa11.16□□□□□ -0.62
SURF1-204ENST00000495952 PPP1R3GB7ZBB8 358 aa11.16□□□□□ -0.62
SURF1-204ENST00000495952 LAD1O00515 517 aa11.16□□□□□ -0.62
SURF1-204ENST00000495952 KIF5CO60282 957 aa11.16□□□□□ -0.62
SURF1-204ENST00000495952 SCG2P13521 617 aa11.16□□□□□ -0.62
SURF1-204ENST00000495952 TXLNAP40222 546 aa11.16□□□□□ -0.62
SURF1-204ENST00000495952 PFKFB3Q16875 520 aaPredicted RBP11.16□□□□□ -0.62
SURF1-204ENST00000495952 SPECC1Q5M775 1068 aa11.16□□□□□ -0.62
SURF1-204ENST00000495952 ZNF658Q5TYW1 1059 aaPredicted RBP11.16□□□□□ -0.62
SURF1-204ENST00000495952 GALNT17Q6IS24 598 aa11.16□□□□□ -0.62
SURF1-204ENST00000495952 CC2D1AQ6P1N0 951 aaPredicted RBP11.16□□□□□ -0.62
SURF1-204ENST00000495952 PDXDC2PQ6P474 469 aa11.16□□□□□ -0.62
SURF1-204ENST00000495952 ZNF662Q6ZS27 426 aa11.16□□□□□ -0.62
SURF1-204ENST00000495952 TOGARAM2Q6ZUX3 1019 aa11.16□□□□□ -0.62
SURF1-204ENST00000495952 SRGAP1Q7Z6B7 1085 aa11.16□□□□□ -0.62
SURF1-204ENST00000495952 TRMT44Q8IYL2 757 aaKnown RBP11.16□□□□□ -0.62
SURF1-204ENST00000495952 PDILTQ8N807 584 aa11.16□□□□□ -0.62
SURF1-204ENST00000495952 DAGLBQ8NCG7 672 aa11.16□□□□□ -0.62
SURF1-204ENST00000495952 MSANTD4Q8NCY6 345 aa11.16□□□□□ -0.62
SURF1-204ENST00000495952 LRRN4CLQ8ND94 238 aa11.16□□□□□ -0.62
SURF1-204ENST00000495952 SHISA4Q96DD7 197 aa11.16□□□□□ -0.62
SURF1-204ENST00000495952 CRNKL1Q9BZJ0 848 aaKnown RBP11.16□□□□□ -0.62
SURF1-204ENST00000495952 VPS54Q9P1Q0 977 aa11.16□□□□□ -0.62
SURF1-204ENST00000495952 ZHX1Q9UKY1 873 aaPredicted RBP11.16□□□□□ -0.62
SURF1-204ENST00000495952 NIP7Q9Y221 180 aaKnown RBP eCLIP11.16□□□□□ -0.62
SURF1-204ENST00000495952 ATAD5Q96QE3 1844 aa11.16□□□□□ -0.62
SURF1-204ENST00000495952 ZNF335Q9H4Z2 1342 aaPredicted RBP11.15□□□□□ -0.62
SURF1-204ENST00000495952 A0A087X0B3 334 aa11.15□□□□□ -0.62
SURF1-204ENST00000495952 LOC102724428A0A0B4J2F2 783 aa11.15□□□□□ -0.62
SURF1-204ENST00000495952 USP5P45974 858 aa11.15□□□□□ -0.62
SURF1-204ENST00000495952 PLA2G4AP47712 749 aa11.15□□□□□ -0.62
SURF1-204ENST00000495952 GNAQP50148 359 aa11.15□□□□□ -0.62
SURF1-204ENST00000495952 ADKP55263 362 aaKnown RBP11.15□□□□□ -0.62
SURF1-204ENST00000495952 SIK1P57059 783 aa11.15□□□□□ -0.62
SURF1-204ENST00000495952 PAK1Q13153 545 aa11.15□□□□□ -0.62
SURF1-204ENST00000495952 KCNB1Q14721 858 aa11.15□□□□□ -0.62
SURF1-204ENST00000495952 ZNF827Q17R98 1081 aa11.15□□□□□ -0.62
SURF1-204ENST00000495952 WHAMMP3Q1A5X7 153 aa11.15□□□□□ -0.62
SURF1-204ENST00000495952 SLC10A5Q5PT55 438 aa11.15□□□□□ -0.62
SURF1-204ENST00000495952 ADGRA1Q86SQ6 560 aa11.15□□□□□ -0.62
SURF1-204ENST00000495952 MIGA1Q8NAN2 632 aa11.15□□□□□ -0.62
SURF1-204ENST00000495952 NOC3LQ8WTT2 800 aaKnown RBP11.15□□□□□ -0.62
SURF1-204ENST00000495952 CCDC12Q8WUD4 166 aaPredicted RBP11.15□□□□□ -0.62
SURF1-204ENST00000495952 ANKS1AQ92625 1134 aa11.15□□□□□ -0.62
SURF1-204ENST00000495952 IQCDQ96DY2 449 aa11.15□□□□□ -0.62
SURF1-204ENST00000495952 WDR24Q96S15 920 aa11.15□□□□□ -0.62
SURF1-204ENST00000495952 CUEDC2Q9H467 287 aa11.15□□□□□ -0.62
SURF1-204ENST00000495952 ARFGAP3Q9NP61 516 aa11.15□□□□□ -0.62
SURF1-204ENST00000495952 CDC23Q9UJX2 597 aa11.15□□□□□ -0.62
SURF1-204ENST00000495952 RAB21Q9UL25 225 aa11.15□□□□□ -0.62
SURF1-204ENST00000495952 C10orf71Q711Q0 1435 aa11.15□□□□□ -0.62
SURF1-204ENST00000495952 BTAF1O14981 1849 aa11.14□□□□□ -0.63
SURF1-204ENST00000495952 SPATA31A1Q5TZJ5 1347 aa11.14□□□□□ -0.63
SURF1-204ENST00000495952 CNTNAP4Q9C0A0 1308 aa11.14□□□□□ -0.63
SURF1-204ENST00000495952 A0A1W2PQC6 194 aa11.14□□□□□ -0.63
SURF1-204ENST00000495952 MINDY4BA8MYZ0 360 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 80.1 ms