RNA–Protein interactions for RNA: ENST00000495677.1

COL1A1-209, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 3

Gene COL1A1, Length 594 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-209ENST00000495677 TNNI3KQ59H18 835 aa16.43■□□□□ 0.22
COL1A1-209ENST00000495677 SH3RF1Q7Z6J0 888 aa16.43■□□□□ 0.22
COL1A1-209ENST00000495677 ACER1Q8TDN7 264 aa16.43■□□□□ 0.22
COL1A1-209ENST00000495677 MOV10L1Q9BXT6 1211 aaKnown RBP16.43■□□□□ 0.22
COL1A1-209ENST00000495677 RPAP3Q9H6T3 665 aaPredicted RBP16.43■□□□□ 0.22
COL1A1-209ENST00000495677 FPGT-TNNI3KV9GXZ4 949 aa16.43■□□□□ 0.22
COL1A1-209ENST00000495677 ZAP70P43403 619 aa16.42■□□□□ 0.22
COL1A1-209ENST00000495677 RARSP54136 660 aaKnown RBP16.42■□□□□ 0.22
COL1A1-209ENST00000495677 DBNDD2Q9BQY9 259 aa16.42■□□□□ 0.22
COL1A1-209ENST00000495677 SPATC1LQ9H0A9 340 aa16.42■□□□□ 0.22
COL1A1-209ENST00000495677 PRDM5Q9NQX1 630 aaPredicted RBP16.42■□□□□ 0.22
COL1A1-209ENST00000495677 NRBP1Q9UHY1 535 aa16.42■□□□□ 0.22
COL1A1-209ENST00000495677 NCOR1O75376 2440 aa16.41■□□□□ 0.22
COL1A1-209ENST00000495677 COBLO75128 1261 aa16.41■□□□□ 0.22
COL1A1-209ENST00000495677 CYP7A1P22680 504 aa16.41■□□□□ 0.22
COL1A1-209ENST00000495677 GUCY1A2P33402 732 aa16.41■□□□□ 0.22
COL1A1-209ENST00000495677 ADCYAP1R1P41586 468 aa16.41■□□□□ 0.22
COL1A1-209ENST00000495677 TJAP1Q5JTD0 557 aa16.41■□□□□ 0.22
COL1A1-209ENST00000495677 MB21D1Q8N884 522 aa16.41■□□□□ 0.22
COL1A1-209ENST00000495677 MROH8Q9H579 483 aa16.41■□□□□ 0.22
COL1A1-209ENST00000495677 PHF24Q9UPV7 400 aa16.41■□□□□ 0.22
COL1A1-209ENST00000495677 NAV1Q8NEY1 1877 aa16.41■□□□□ 0.22
COL1A1-209ENST00000495677 HSFX4A0A1B0GTS1 333 aaPredicted RBP16.4■□□□□ 0.22
COL1A1-209ENST00000495677 HSFX3A0A1B0GWH4 333 aaPredicted RBP16.4■□□□□ 0.22
COL1A1-209ENST00000495677 KIAA0355O15063 1070 aa16.4■□□□□ 0.22
COL1A1-209ENST00000495677 ERCC3P19447 782 aa16.4■□□□□ 0.22
COL1A1-209ENST00000495677 SHMT1P34896 483 aa16.4■□□□□ 0.22
COL1A1-209ENST00000495677 USP5P45974 858 aa16.4■□□□□ 0.22
COL1A1-209ENST00000495677 TLE2Q04725 743 aa16.4■□□□□ 0.22
COL1A1-209ENST00000495677 GABPAQ06546 454 aa16.4■□□□□ 0.22
COL1A1-209ENST00000495677 POLA2Q14181 598 aa16.4■□□□□ 0.22
COL1A1-209ENST00000495677 PIH1D3Q9NQM4 214 aaKnown RBP16.4■□□□□ 0.22
COL1A1-209ENST00000495677 CLTBP09497 229 aa16.39■□□□□ 0.21
COL1A1-209ENST00000495677 ITGB8P26012 769 aa16.39■□□□□ 0.21
COL1A1-209ENST00000495677 DSG3P32926 999 aa16.39■□□□□ 0.21
COL1A1-209ENST00000495677 ANO1Q5XXA6 986 aa16.39■□□□□ 0.21
COL1A1-209ENST00000495677 MAML3Q96JK9 1138 aa16.39■□□□□ 0.21
COL1A1-209ENST00000495677 RNPC3Q96LT9 517 aaKnown RBP16.39■□□□□ 0.21
COL1A1-209ENST00000495677 TOX2Q96NM4 488 aa16.39■□□□□ 0.21
COL1A1-209ENST00000495677 A0A1W2PRG0 241 aa16.38■□□□□ 0.21
COL1A1-209ENST00000495677 TNFRSF10AO00220 468 aa16.38■□□□□ 0.21
COL1A1-209ENST00000495677 IPO8O15397 1037 aaKnown RBP16.38■□□□□ 0.21
COL1A1-209ENST00000495677 PLCD1P51178 756 aa16.38■□□□□ 0.21
COL1A1-209ENST00000495677 PRAMEF19Q5SWL8 479 aa16.38■□□□□ 0.21
COL1A1-209ENST00000495677 SSH3Q8TE77 659 aa16.38■□□□□ 0.21
COL1A1-209ENST00000495677 FERMT2Q96AC1 680 aa16.38■□□□□ 0.21
COL1A1-209ENST00000495677 DIS3Q9Y2L1 958 aaKnown RBP16.38■□□□□ 0.21
COL1A1-209ENST00000495677 COL9A1P20849 921 aa16.37■□□□□ 0.21
COL1A1-209ENST00000495677 EPHB4P54760 987 aa16.37■□□□□ 0.21
COL1A1-209ENST00000495677 GRIN2CQ14957 1233 aa16.37■□□□□ 0.21
COL1A1-209ENST00000495677 SEPT2Q15019 361 aa16.37■□□□□ 0.21
COL1A1-209ENST00000495677 FAM47AQ5JRC9 791 aa16.37■□□□□ 0.21
COL1A1-209ENST00000495677 RNF180Q86T96 592 aa16.37■□□□□ 0.21
COL1A1-209ENST00000495677 NOP58Q9Y2X3 529 aaKnown RBP16.37■□□□□ 0.21
COL1A1-209ENST00000495677 ROBO3Q96MS0 1386 aa16.37■□□□□ 0.21
COL1A1-209ENST00000495677 GBF1Q92538 1859 aa16.36■□□□□ 0.21
COL1A1-209ENST00000495677 IDH1O75874 414 aaKnown RBP16.36■□□□□ 0.21
COL1A1-209ENST00000495677 SLC25A27O95847 323 aa16.36■□□□□ 0.21
COL1A1-209ENST00000495677 RARBP10826 455 aa16.36■□□□□ 0.21
COL1A1-209ENST00000495677 FCER1AP12319 257 aa16.36■□□□□ 0.21
COL1A1-209ENST00000495677 RAG1P15918 1043 aa16.36■□□□□ 0.21
COL1A1-209ENST00000495677 DNAJB2P25686 324 aa16.36■□□□□ 0.21
COL1A1-209ENST00000495677 ATP8B2P98198 1209 aa16.36■□□□□ 0.21
COL1A1-209ENST00000495677 ANKRD33Q7Z3H0 272 aa16.36■□□□□ 0.21
COL1A1-209ENST00000495677 MAGEB6Q8N7X4 407 aa16.36■□□□□ 0.21
COL1A1-209ENST00000495677 MIGA1Q8NAN2 632 aa16.36■□□□□ 0.21
COL1A1-209ENST00000495677 ATXN2LQ8WWM7 1075 aaKnown RBP16.36■□□□□ 0.21
COL1A1-209ENST00000495677 RIOK1Q9BRS2 568 aaKnown RBP16.36■□□□□ 0.21
COL1A1-209ENST00000495677 TSEN34Q9BSV6 310 aaKnown RBP16.36■□□□□ 0.21
COL1A1-209ENST00000495677 XPNPEP3Q9NQH7 507 aa16.36■□□□□ 0.21
COL1A1-209ENST00000495677 DBNLQ9UJU6 430 aaKnown RBP16.36■□□□□ 0.21
COL1A1-209ENST00000495677 BAZ2AQ9UIF9 1905 aaKnown RBP16.35■□□□□ 0.21
COL1A1-209ENST00000495677 TRIM27P14373 513 aa16.35■□□□□ 0.21
COL1A1-209ENST00000495677 FPGSQ05932 587 aa16.35■□□□□ 0.21
COL1A1-209ENST00000495677 MAP3K12Q12852 859 aa16.35■□□□□ 0.21
COL1A1-209ENST00000495677 USP38Q8NB14 1042 aa16.35■□□□□ 0.21
COL1A1-209ENST00000495677 ZNF576Q9H609 170 aa16.35■□□□□ 0.21
COL1A1-209ENST00000495677 ADAMTS5Q9UNA0 930 aa16.35■□□□□ 0.21
COL1A1-209ENST00000495677 ZNF316A6NFI3 1004 aaPredicted RBP16.34■□□□□ 0.21
COL1A1-209ENST00000495677 MYCNP04198 464 aaPredicted RBP16.34■□□□□ 0.21
COL1A1-209ENST00000495677 FAAP100Q0VG06 881 aa16.34■□□□□ 0.21
COL1A1-209ENST00000495677 TMEM179Q6ZVK1 233 aa16.34■□□□□ 0.21
COL1A1-209ENST00000495677 NCAPG2Q86XI2 1143 aa16.34■□□□□ 0.21
COL1A1-209ENST00000495677 TANGO6Q9C0B7 1094 aa16.34■□□□□ 0.21
COL1A1-209ENST00000495677 TMX2Q9Y320 296 aa16.34■□□□□ 0.21
COL1A1-209ENST00000495677 MCM3APO60318 1980 aa16.34■□□□□ 0.21
COL1A1-209ENST00000495677 A0A1W2PQ45 241 aaPredicted RBP16.33■□□□□ 0.2
COL1A1-209ENST00000495677 A0A1W2PQY0 241 aa16.33■□□□□ 0.2
COL1A1-209ENST00000495677 SURF6O75683 361 aaKnown RBP16.33■□□□□ 0.2
COL1A1-209ENST00000495677 POLR3DP05423 398 aaPredicted RBP16.33■□□□□ 0.2
COL1A1-209ENST00000495677 ZNF792Q3KQV3 632 aa16.33■□□□□ 0.2
COL1A1-209ENST00000495677 KIAA1755Q5JYT7 1200 aa16.33■□□□□ 0.2
COL1A1-209ENST00000495677 AKNAD1Q5T1N1 836 aa16.33■□□□□ 0.2
COL1A1-209ENST00000495677 EAF2Q96CJ1 260 aaPredicted RBP16.33■□□□□ 0.2
COL1A1-209ENST00000495677 TINF2Q9BSI4 451 aa16.33■□□□□ 0.2
COL1A1-209ENST00000495677 TMEM39AQ9NV64 488 aa16.33■□□□□ 0.2
COL1A1-209ENST00000495677 DCDC2CA8MYV0 355 aa16.32■□□□□ 0.2
COL1A1-209ENST00000495677 ADAMTS4O75173 837 aa16.32■□□□□ 0.2
COL1A1-209ENST00000495677 TIMP1P01033 207 aa16.32■□□□□ 0.2
COL1A1-209ENST00000495677 ZNF865P0CJ78 1059 aaPredicted RBP16.32■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms