RNA–Protein interactions for RNA: ENST00000495666.5

RFTN1-211, Transcript of raftlin, lipid raft linker 1, humanhuman

TSL 4

Gene RFTN1, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFTN1-211ENST00000495666 FLOT1O75955 427 aa12.87□□□□□ -0.35
RFTN1-211ENST00000495666 SYN1P17600 705 aa12.87□□□□□ -0.35
RFTN1-211ENST00000495666 RGS2P41220 211 aa12.87□□□□□ -0.35
RFTN1-211ENST00000495666 CDK8P49336 464 aa12.87□□□□□ -0.35
RFTN1-211ENST00000495666 ANO1Q5XXA6 986 aa12.87□□□□□ -0.35
RFTN1-211ENST00000495666 ZSCAN25Q6NSZ9 544 aa12.87□□□□□ -0.35
RFTN1-211ENST00000495666 TMEM179Q6ZVK1 233 aa12.87□□□□□ -0.35
RFTN1-211ENST00000495666 ARHGEF10LQ9HCE6 1279 aa12.87□□□□□ -0.35
RFTN1-211ENST00000495666 PAK6Q9NQU5 681 aaPredicted RBP12.87□□□□□ -0.35
RFTN1-211ENST00000495666 RPTORQ8N122 1335 aa12.87□□□□□ -0.35
RFTN1-211ENST00000495666 M0R2C6 588 aa12.86□□□□□ -0.35
RFTN1-211ENST00000495666 IGSF3O75054 1194 aa12.86□□□□□ -0.35
RFTN1-211ENST00000495666 TDO2P48775 406 aa12.86□□□□□ -0.35
RFTN1-211ENST00000495666 CCNA1P78396 465 aa12.86□□□□□ -0.35
RFTN1-211ENST00000495666 CACNB2Q08289 660 aaPredicted RBP12.86□□□□□ -0.35
RFTN1-211ENST00000495666 NECAB2Q7Z6G3 386 aa12.86□□□□□ -0.35
RFTN1-211ENST00000495666 NCAPG2Q86XI2 1143 aa12.86□□□□□ -0.35
RFTN1-211ENST00000495666 ATG4CQ96DT6 458 aa12.86□□□□□ -0.35
RFTN1-211ENST00000495666 C12orf42Q96LP6 360 aa12.86□□□□□ -0.35
RFTN1-211ENST00000495666 CRBNQ96SW2 442 aa12.86□□□□□ -0.35
RFTN1-211ENST00000495666 APBA2Q99767 749 aa12.86□□□□□ -0.35
RFTN1-211ENST00000495666 SWAP70Q9UH65 585 aa12.86□□□□□ -0.35
RFTN1-211ENST00000495666 RABGAP1Q9Y3P9 1069 aa12.86□□□□□ -0.35
RFTN1-211ENST00000495666 MYH4Q9Y623 1939 aa12.86□□□□□ -0.35
RFTN1-211ENST00000495666 PRDM1O75626 825 aa12.85□□□□□ -0.35
RFTN1-211ENST00000495666 CYP2C19P33261 490 aa12.85□□□□□ -0.35
RFTN1-211ENST00000495666 RRP1P56182 461 aaKnown RBP12.85□□□□□ -0.35
RFTN1-211ENST00000495666 MAP2K5Q13163 448 aa12.85□□□□□ -0.35
RFTN1-211ENST00000495666 C12orf60Q5U649 245 aa12.85□□□□□ -0.35
RFTN1-211ENST00000495666 CTR9Q6PD62 1173 aa12.85□□□□□ -0.35
RFTN1-211ENST00000495666 GTF3C2Q8WUA4 911 aaPredicted RBP12.85□□□□□ -0.35
RFTN1-211ENST00000495666 SEC62Q99442 399 aaKnown RBP12.85□□□□□ -0.35
RFTN1-211ENST00000495666 NUP88Q99567 741 aaPredicted RBP12.85□□□□□ -0.35
RFTN1-211ENST00000495666 FSD1Q9BTV5 496 aa12.85□□□□□ -0.35
RFTN1-211ENST00000495666 ATP8A2Q9NTI2 1148 aa12.85□□□□□ -0.35
RFTN1-211ENST00000495666 FBXO28Q9NVF7 368 aa12.85□□□□□ -0.35
RFTN1-211ENST00000495666 FLRT1Q9NZU1 646 aa12.85□□□□□ -0.35
RFTN1-211ENST00000495666 RBM27Q9P2N5 1060 aaKnown RBP12.85□□□□□ -0.35
RFTN1-211ENST00000495666 ZBTB47Q9UFB7 747 aaPredicted RBP12.85□□□□□ -0.35
RFTN1-211ENST00000495666 PCDHB15Q9Y5E8 787 aa12.85□□□□□ -0.35
RFTN1-211ENST00000495666 NR2E3Q9Y5X4 410 aa12.85□□□□□ -0.35
RFTN1-211ENST00000495666 PARP14Q460N5 1801 aa12.85□□□□□ -0.35
RFTN1-211ENST00000495666 RLFQ13129 1914 aa12.84□□□□□ -0.35
RFTN1-211ENST00000495666 GPAA1O43292 621 aa12.84□□□□□ -0.35
RFTN1-211ENST00000495666 GLRX3O76003 335 aaKnown RBP12.84□□□□□ -0.35
RFTN1-211ENST00000495666 EEF2P13639 858 aaKnown RBP12.84□□□□□ -0.35
RFTN1-211ENST00000495666 UBE3CQ15386 1083 aa12.84□□□□□ -0.35
RFTN1-211ENST00000495666 UBE2Q1Q7Z7E8 422 aa12.84□□□□□ -0.35
RFTN1-211ENST00000495666 DPP9Q86TI2 863 aa12.84□□□□□ -0.35
RFTN1-211ENST00000495666 KBTBD3Q8NAB2 608 aa12.84□□□□□ -0.35
RFTN1-211ENST00000495666 NPLOC4Q8TAT6 608 aa12.84□□□□□ -0.35
RFTN1-211ENST00000495666 OSBP2Q969R2 916 aa12.84□□□□□ -0.35
RFTN1-211ENST00000495666 MOV10L1Q9BXT6 1211 aaKnown RBP12.84□□□□□ -0.35
RFTN1-211ENST00000495666 C11orf49Q9H6J7 331 aa12.84□□□□□ -0.35
RFTN1-211ENST00000495666 MKNK2Q9HBH9 465 aa12.84□□□□□ -0.35
RFTN1-211ENST00000495666 STAP2Q9UGK3 403 aa12.84□□□□□ -0.35
RFTN1-211ENST00000495666 A0A0G2JMZ2 1700 aa12.84□□□□□ -0.35
RFTN1-211ENST00000495666 ERCC3P19447 782 aa12.83□□□□□ -0.36
RFTN1-211ENST00000495666 PTPREP23469 700 aa12.83□□□□□ -0.36
RFTN1-211ENST00000495666 ADORA2AP29274 412 aa12.83□□□□□ -0.36
RFTN1-211ENST00000495666 FXR1P51114 621 aaKnown RBP eCLIP12.83□□□□□ -0.36
RFTN1-211ENST00000495666 COG2Q14746 738 aa12.83□□□□□ -0.36
RFTN1-211ENST00000495666 MORN1Q5T089 497 aa12.83□□□□□ -0.36
RFTN1-211ENST00000495666 FAM83BQ5T0W9 1011 aa12.83□□□□□ -0.36
RFTN1-211ENST00000495666 MFSD14CQ5VZR4 134 aa12.83□□□□□ -0.36
RFTN1-211ENST00000495666 TMED8Q6PL24 325 aaPredicted RBP12.83□□□□□ -0.36
RFTN1-211ENST00000495666 C16orf86Q6ZW13 317 aa12.83□□□□□ -0.36
RFTN1-211ENST00000495666 NBPF3Q9H094 633 aa12.83□□□□□ -0.36
RFTN1-211ENST00000495666 SPATC1LQ9H0A9 340 aa12.83□□□□□ -0.36
RFTN1-211ENST00000495666 CRISPLD2Q9H0B8 497 aa12.83□□□□□ -0.36
RFTN1-211ENST00000495666 DCTPP1Q9H773 170 aa12.83□□□□□ -0.36
RFTN1-211ENST00000495666 SH2D4AQ9H788 454 aa12.83□□□□□ -0.36
RFTN1-211ENST00000495666 VCPKMTQ9H867 229 aa12.83□□□□□ -0.36
RFTN1-211ENST00000495666 ARPP21Q9UBL0 812 aaPredicted RBP12.83□□□□□ -0.36
RFTN1-211ENST00000495666 MTMR7Q9Y216 660 aa12.83□□□□□ -0.36
RFTN1-211ENST00000495666 ZNFX1Q9P2E3 1918 aaKnown RBP12.83□□□□□ -0.36
RFTN1-211ENST00000495666 RNF113AO15541 343 aaKnown RBP12.82□□□□□ -0.36
RFTN1-211ENST00000495666 ATN1P54259 1190 aaPredicted RBP12.82□□□□□ -0.36
RFTN1-211ENST00000495666 ANKRD45Q5TZF3 282 aa12.82□□□□□ -0.36
RFTN1-211ENST00000495666 CCDC129Q6ZRS4 1044 aa12.82□□□□□ -0.36
RFTN1-211ENST00000495666 APPBP2Q92624 585 aa12.82□□□□□ -0.36
RFTN1-211ENST00000495666 STRBPQ96SI9 672 aaKnown RBP12.82□□□□□ -0.36
RFTN1-211ENST00000495666 EPB41L4AQ9HCS5 686 aaPredicted RBP12.82□□□□□ -0.36
RFTN1-211ENST00000495666 PLXNA1Q9UIW2 1896 aa12.82□□□□□ -0.36
RFTN1-211ENST00000495666 SLC15A5A6NIM6 579 aa12.81□□□□□ -0.36
RFTN1-211ENST00000495666 GSG1L2A8MUP6 293 aa12.81□□□□□ -0.36
RFTN1-211ENST00000495666 PRAMEF19Q5SWL8 479 aa12.81□□□□□ -0.36
RFTN1-211ENST00000495666 LBX2Q6XYB7 198 aa12.81□□□□□ -0.36
RFTN1-211ENST00000495666 SIAH1Q8IUQ4 282 aa12.81□□□□□ -0.36
RFTN1-211ENST00000495666 LRRC47Q8N1G4 583 aaKnown RBP12.81□□□□□ -0.36
RFTN1-211ENST00000495666 USP6NLQ92738 828 aa12.81□□□□□ -0.36
RFTN1-211ENST00000495666 GOPCQ9HD26 462 aa12.81□□□□□ -0.36
RFTN1-211ENST00000495666 TMX2Q9Y320 296 aa12.81□□□□□ -0.36
RFTN1-211ENST00000495666 ERC2O15083 957 aa12.8□□□□□ -0.36
RFTN1-211ENST00000495666 PGK2P07205 417 aa12.8□□□□□ -0.36
RFTN1-211ENST00000495666 XRCC5P13010 732 aaKnown RBP12.8□□□□□ -0.36
RFTN1-211ENST00000495666 MX1P20591 662 aa12.8□□□□□ -0.36
RFTN1-211ENST00000495666 DSG3P32926 999 aa12.8□□□□□ -0.36
RFTN1-211ENST00000495666 GRB14Q14449 540 aa12.8□□□□□ -0.36
RFTN1-211ENST00000495666 FAM47AQ5JRC9 791 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms