RNA–Protein interactions for RNA: ENST00000495606.5

IMP4-217, Transcript of IMP4, U3 small nucleolar ribonucleoprotein, humanhuman

TSL 4

Gene IMP4, Length 546 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IMP4-217ENST00000495606 OTUD7BQ6GQQ9 843 aa17.16■□□□□ 0.34
IMP4-217ENST00000495606 SPICE1Q8N0Z3 855 aa17.16■□□□□ 0.34
IMP4-217ENST00000495606 KIAA1683Q9H0B3 1180 aa17.16■□□□□ 0.34
IMP4-217ENST00000495606 MTMR4Q9NYA4 1195 aa17.16■□□□□ 0.34
IMP4-217ENST00000495606 SLC27A2O14975 620 aa17.15■□□□□ 0.34
IMP4-217ENST00000495606 PEX10O60683 326 aa17.15■□□□□ 0.34
IMP4-217ENST00000495606 KDM4AO75164 1064 aa17.15■□□□□ 0.34
IMP4-217ENST00000495606 CREB3L3Q68CJ9 461 aa17.15■□□□□ 0.34
IMP4-217ENST00000495606 LRRC47Q8N1G4 583 aaKnown RBP17.15■□□□□ 0.34
IMP4-217ENST00000495606 RNF41Q9H4P4 317 aaPredicted RBP17.15■□□□□ 0.34
IMP4-217ENST00000495606 ARHGEF10LQ9HCE6 1279 aa17.15■□□□□ 0.34
IMP4-217ENST00000495606 AGTPBP1Q9UPW5 1226 aa17.15■□□□□ 0.34
IMP4-217ENST00000495606 TMX2Q9Y320 296 aa17.15■□□□□ 0.34
IMP4-217ENST00000495606 TRIM17Q9Y577 477 aa17.15■□□□□ 0.34
IMP4-217ENST00000495606 BRCA2P51587 3418 aa17.15■□□□□ 0.34
IMP4-217ENST00000495606 E7EWF7 191 aa17.14■□□□□ 0.33
IMP4-217ENST00000495606 ALDH1A1P00352 501 aa17.14■□□□□ 0.33
IMP4-217ENST00000495606 NECTIN1Q15223 517 aa17.14■□□□□ 0.33
IMP4-217ENST00000495606 CYB5R4Q7L1T6 521 aa17.14■□□□□ 0.33
IMP4-217ENST00000495606 PROCA1Q8NCQ7 364 aaPredicted RBP17.14■□□□□ 0.33
IMP4-217ENST00000495606 NUP88Q99567 741 aaPredicted RBP17.14■□□□□ 0.33
IMP4-217ENST00000495606 NYAP2Q9P242 653 aa17.14■□□□□ 0.33
IMP4-217ENST00000495606 CPA4Q9UI42 421 aa17.14■□□□□ 0.33
IMP4-217ENST00000495606 MTMR7Q9Y216 660 aa17.14■□□□□ 0.33
IMP4-217ENST00000495606 TRIOBPQ9H2D6 2365 aa17.14■□□□□ 0.33
IMP4-217ENST00000495606 PTPRFP10586 1907 aa17.13■□□□□ 0.33
IMP4-217ENST00000495606 VCAM1P19320 739 aa17.13■□□□□ 0.33
IMP4-217ENST00000495606 CHST3Q7LGC8 479 aa17.13■□□□□ 0.33
IMP4-217ENST00000495606 OTOP1Q7RTM1 612 aa17.13■□□□□ 0.33
IMP4-217ENST00000495606 ESR2Q92731 530 aa17.13■□□□□ 0.33
IMP4-217ENST00000495606 P2RX7Q99572 595 aaKnown RBP17.13■□□□□ 0.33
IMP4-217ENST00000495606 ASCC2Q9H1I8 757 aaPredicted RBP17.13■□□□□ 0.33
IMP4-217ENST00000495606 RPAP3Q9H6T3 665 aaPredicted RBP17.13■□□□□ 0.33
IMP4-217ENST00000495606 ZFYVE28Q9HCC9 887 aa17.13■□□□□ 0.33
IMP4-217ENST00000495606 ZSWIM5Q9P217 1185 aa17.13■□□□□ 0.33
IMP4-217ENST00000495606 STX8Q9UNK0 236 aa17.13■□□□□ 0.33
IMP4-217ENST00000495606 SZT2Q5T011 3432 aa17.12■□□□□ 0.33
IMP4-217ENST00000495606 EN2P19622 333 aaPredicted RBP17.12■□□□□ 0.33
IMP4-217ENST00000495606 USP14P54578 494 aa17.12■□□□□ 0.33
IMP4-217ENST00000495606 SAMD1Q6SPF0 538 aaPredicted RBP17.12■□□□□ 0.33
IMP4-217ENST00000495606 RASGRP2Q7LDG7 609 aa17.12■□□□□ 0.33
IMP4-217ENST00000495606 RASEFQ8IZ41 740 aa17.12■□□□□ 0.33
IMP4-217ENST00000495606 C12orf42Q96LP6 360 aa17.12■□□□□ 0.33
IMP4-217ENST00000495606 VCPKMTQ9H867 229 aa17.12■□□□□ 0.33
IMP4-217ENST00000495606 PLIN4Q96Q06 1357 aa17.12■□□□□ 0.33
IMP4-217ENST00000495606 GREB1LQ9C091 1923 aaPredicted RBP17.11■□□□□ 0.33
IMP4-217ENST00000495606 F5H6K3 240 aa17.11■□□□□ 0.33
IMP4-217ENST00000495606 TTLL1O95922 423 aa17.11■□□□□ 0.33
IMP4-217ENST00000495606 KLRC3Q07444 240 aa17.11■□□□□ 0.33
IMP4-217ENST00000495606 MKL1Q969V6 931 aa17.11■□□□□ 0.33
IMP4-217ENST00000495606 COLQQ9Y215 455 aaPredicted RBP17.11■□□□□ 0.33
IMP4-217ENST00000495606 LAMA4Q16363 1823 aa17.11■□□□□ 0.33
IMP4-217ENST00000495606 SEC24BO95487 1268 aa17.1■□□□□ 0.33
IMP4-217ENST00000495606 NDUFB10O96000 172 aa17.1■□□□□ 0.33
IMP4-217ENST00000495606 OSBPP22059 807 aa17.1■□□□□ 0.33
IMP4-217ENST00000495606 CAP1Q01518 475 aa17.1■□□□□ 0.33
IMP4-217ENST00000495606 FAM83BQ5T0W9 1011 aa17.1■□□□□ 0.33
IMP4-217ENST00000495606 RCSD1Q6JBY9 416 aa17.1■□□□□ 0.33
IMP4-217ENST00000495606 POTEEQ6S8J3 1075 aa17.1■□□□□ 0.33
IMP4-217ENST00000495606 CATSPERGQ6ZRH7 1159 aa17.1■□□□□ 0.33
IMP4-217ENST00000495606 TMEM47Q9BQJ4 181 aa17.1■□□□□ 0.33
IMP4-217ENST00000495606 KRT23Q9C075 422 aa17.1■□□□□ 0.33
IMP4-217ENST00000495606 TANGO6Q9C0B7 1094 aa17.1■□□□□ 0.33
IMP4-217ENST00000495606 USP17L15C9J2P7 530 aa17.09■□□□□ 0.33
IMP4-217ENST00000495606 USP17L13C9JLJ4 530 aa17.09■□□□□ 0.33
IMP4-217ENST00000495606 USP17L11C9JVI0 530 aa17.09■□□□□ 0.33
IMP4-217ENST00000495606 USP17L18D6R9N7 530 aa17.09■□□□□ 0.33
IMP4-217ENST00000495606 USP17L22D6RA61 530 aa17.09■□□□□ 0.33
IMP4-217ENST00000495606 USP17L17D6RBQ6 530 aa17.09■□□□□ 0.33
IMP4-217ENST00000495606 USP17L19D6RCP7 530 aa17.09■□□□□ 0.33
IMP4-217ENST00000495606 USP17L20D6RJB6 530 aa17.09■□□□□ 0.33
IMP4-217ENST00000495606 TLR2O60603 784 aa17.09■□□□□ 0.33
IMP4-217ENST00000495606 PCP11498 1178 aaKnown RBP17.09■□□□□ 0.33
IMP4-217ENST00000495606 HOXA7P31268 230 aaPredicted RBP17.09■□□□□ 0.33
IMP4-217ENST00000495606 IRX3P78415 501 aaPredicted RBP17.09■□□□□ 0.33
IMP4-217ENST00000495606 USP17L24Q0WX57 530 aa17.09■□□□□ 0.33
IMP4-217ENST00000495606 SLFN13Q68D06 897 aa17.09■□□□□ 0.33
IMP4-217ENST00000495606 C17orf99Q6UX52 265 aa17.09■□□□□ 0.33
IMP4-217ENST00000495606 ZSCAN10Q96SZ4 725 aaPredicted RBP17.09■□□□□ 0.33
IMP4-217ENST00000495606 PARK7Q99497 189 aaKnown RBP17.09■□□□□ 0.33
IMP4-217ENST00000495606 SH2D4AQ9H788 454 aa17.09■□□□□ 0.33
IMP4-217ENST00000495606 SENP2Q9HC62 589 aa17.09■□□□□ 0.33
IMP4-217ENST00000495606 GOPCQ9HD26 462 aa17.09■□□□□ 0.33
IMP4-217ENST00000495606 ZCCHC17Q9NP64 241 aaKnown RBP17.09■□□□□ 0.33
IMP4-217ENST00000495606 GPHNQ9NQX3 736 aaPredicted RBP17.09■□□□□ 0.33
IMP4-217ENST00000495606 TCP11L1Q9NUJ3 509 aa17.09■□□□□ 0.33
IMP4-217ENST00000495606 FBXO28Q9NVF7 368 aa17.09■□□□□ 0.33
IMP4-217ENST00000495606 PTPN22Q9Y2R2 807 aa17.09■□□□□ 0.33
IMP4-217ENST00000495606 SLC45A1Q9Y2W3 748 aa17.09■□□□□ 0.33
IMP4-217ENST00000495606 ADGRA2Q96PE1 1338 aa17.09■□□□□ 0.33
IMP4-217ENST00000495606 LOC285556D6RIA3 1793 aa17.09■□□□□ 0.33
IMP4-217ENST00000495606 MCCP23508 829 aa17.08■□□□□ 0.32
IMP4-217ENST00000495606 ANTXR2P58335 489 aa17.08■□□□□ 0.32
IMP4-217ENST00000495606 TRDNQ13061 729 aa17.08■□□□□ 0.32
IMP4-217ENST00000495606 PABPC4Q13310 644 aaKnown RBP eCLIP17.08■□□□□ 0.32
IMP4-217ENST00000495606 ADCK5Q3MIX3 580 aa17.08■□□□□ 0.32
IMP4-217ENST00000495606 RALYLQ86SE5 291 aaKnown RBP17.08■□□□□ 0.32
IMP4-217ENST00000495606 ANKRD13CQ8N6S4 541 aa17.08■□□□□ 0.32
IMP4-217ENST00000495606 NCOA7Q8NI08 942 aa17.08■□□□□ 0.32
IMP4-217ENST00000495606 SMCR8Q8TEV9 937 aaPredicted RBP17.08■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms