RNA–Protein interactions for RNA: ENST00000495553.1

ACTN4-207, Transcript of actinin alpha 4, humanhuman

TSL 5

Gene ACTN4, Length 586 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-207ENST00000495553 CALM2P0DP24 149 aa11.11□□□□□ -0.63
ACTN4-207ENST00000495553 CALM3P0DP25 149 aa11.11□□□□□ -0.63
ACTN4-207ENST00000495553 AKR1B1P15121 316 aa11.11□□□□□ -0.63
ACTN4-207ENST00000495553 EXOSC10Q01780 885 aaKnown RBP11.11□□□□□ -0.63
ACTN4-207ENST00000495553 FAM47AQ5JRC9 791 aa11.11□□□□□ -0.63
ACTN4-207ENST00000495553 Q6ZUG5 572 aa11.11□□□□□ -0.63
ACTN4-207ENST00000495553 PRRT2Q7Z6L0 340 aaPredicted RBP11.11□□□□□ -0.63
ACTN4-207ENST00000495553 CATIPQ7Z7H3 387 aa11.11□□□□□ -0.63
ACTN4-207ENST00000495553 DGKHQ86XP1 1220 aa11.11□□□□□ -0.63
ACTN4-207ENST00000495553 FBXL16Q8N461 479 aa11.11□□□□□ -0.63
ACTN4-207ENST00000495553 SNX21Q969T3 373 aa11.11□□□□□ -0.63
ACTN4-207ENST00000495553 TTC14Q96N46 770 aa11.11□□□□□ -0.63
ACTN4-207ENST00000495553 FEZ1Q99689 392 aa11.11□□□□□ -0.63
ACTN4-207ENST00000495553 PTPN18Q99952 460 aa11.11□□□□□ -0.63
ACTN4-207ENST00000495553 SH2D4AQ9H788 454 aa11.11□□□□□ -0.63
ACTN4-207ENST00000495553 KANSL2Q9H9L4 492 aa11.11□□□□□ -0.63
ACTN4-207ENST00000495553 SH2B1Q9NRF2 756 aaPredicted RBP11.11□□□□□ -0.63
ACTN4-207ENST00000495553 TMOD4Q9NZQ9 345 aa11.11□□□□□ -0.63
ACTN4-207ENST00000495553 TSKSQ9UJT2 592 aa11.11□□□□□ -0.63
ACTN4-207ENST00000495553 LIMCH1Q9UPQ0 1083 aa11.11□□□□□ -0.63
ACTN4-207ENST00000495553 TNKSO95271 1327 aa11.1□□□□□ -0.63
ACTN4-207ENST00000495553 BTBD19C9JJ37 291 aa11.1□□□□□ -0.63
ACTN4-207ENST00000495553 USP17L10C9JJH3 530 aa11.1□□□□□ -0.63
ACTN4-207ENST00000495553 DHX16O60231 1041 aaKnown RBP11.1□□□□□ -0.63
ACTN4-207ENST00000495553 TBC1D8O95759 1140 aa11.1□□□□□ -0.63
ACTN4-207ENST00000495553 TTLL1O95922 423 aa11.1□□□□□ -0.63
ACTN4-207ENST00000495553 CPA1P15085 419 aa11.1□□□□□ -0.63
ACTN4-207ENST00000495553 LIFRP42702 1097 aa11.1□□□□□ -0.63
ACTN4-207ENST00000495553 AK2P54819 239 aa11.1□□□□□ -0.63
ACTN4-207ENST00000495553 HMGCS2P54868 508 aa11.1□□□□□ -0.63
ACTN4-207ENST00000495553 BACE1P56817 501 aa11.1□□□□□ -0.63
ACTN4-207ENST00000495553 MTMR2Q13614 643 aa11.1□□□□□ -0.63
ACTN4-207ENST00000495553 SEPT2Q15019 361 aa11.1□□□□□ -0.63
ACTN4-207ENST00000495553 CYB5R4Q7L1T6 521 aa11.1□□□□□ -0.63
ACTN4-207ENST00000495553 CHST3Q7LGC8 479 aa11.1□□□□□ -0.63
ACTN4-207ENST00000495553 ANKRD23Q86SG2 305 aa11.1□□□□□ -0.63
ACTN4-207ENST00000495553 FAM43AQ8N2R8 423 aa11.1□□□□□ -0.63
ACTN4-207ENST00000495553 BRF1Q92994 677 aa11.1□□□□□ -0.63
ACTN4-207ENST00000495553 KAT14Q9H8E8 782 aa11.1□□□□□ -0.63
ACTN4-207ENST00000495553 ARHGEF10LQ9HCE6 1279 aa11.1□□□□□ -0.63
ACTN4-207ENST00000495553 ZCCHC17Q9NP64 241 aaKnown RBP11.1□□□□□ -0.63
ACTN4-207ENST00000495553 INCENPQ9NQS7 918 aa11.1□□□□□ -0.63
ACTN4-207ENST00000495553 STX8Q9UNK0 236 aa11.1□□□□□ -0.63
ACTN4-207ENST00000495553 SLC12A7Q9Y666 1083 aa11.1□□□□□ -0.63
ACTN4-207ENST00000495553 PLIN4Q96Q06 1357 aa11.1□□□□□ -0.63
ACTN4-207ENST00000495553 MYH8P13535 1937 aa11.09□□□□□ -0.63
ACTN4-207ENST00000495553 CCDC196A0A1B0GTZ2 297 aa11.09□□□□□ -0.63
ACTN4-207ENST00000495553 C19orf81C9J6K1 198 aa11.09□□□□□ -0.63
ACTN4-207ENST00000495553 PDHXO00330 501 aa11.09□□□□□ -0.63
ACTN4-207ENST00000495553 SH2B2O14492 632 aaPredicted RBP11.09□□□□□ -0.63
ACTN4-207ENST00000495553 HSPA8P11142 646 aaKnown RBP11.09□□□□□ -0.63
ACTN4-207ENST00000495553 LBX1P52954 281 aa11.09□□□□□ -0.63
ACTN4-207ENST00000495553 USP14P54578 494 aa11.09□□□□□ -0.63
ACTN4-207ENST00000495553 ATP2B2Q01814 1243 aa11.09□□□□□ -0.63
ACTN4-207ENST00000495553 ICA1Q05084 483 aa11.09□□□□□ -0.63
ACTN4-207ENST00000495553 PABPC4Q13310 644 aaKnown RBP eCLIP11.09□□□□□ -0.63
ACTN4-207ENST00000495553 PPP2R5BQ15173 497 aa11.09□□□□□ -0.63
ACTN4-207ENST00000495553 TAF1CQ15572 869 aaPredicted RBP11.09□□□□□ -0.63
ACTN4-207ENST00000495553 CPLX2Q6PUV4 134 aaKnown RBP11.09□□□□□ -0.63
ACTN4-207ENST00000495553 PROCA1Q8NCQ7 364 aaPredicted RBP11.09□□□□□ -0.63
ACTN4-207ENST00000495553 ZKSCAN3Q9BRR0 538 aa11.09□□□□□ -0.63
ACTN4-207ENST00000495553 LRRC2Q9BYS8 371 aa11.09□□□□□ -0.63
ACTN4-207ENST00000495553 ZFYVE28Q9HCC9 887 aa11.09□□□□□ -0.63
ACTN4-207ENST00000495553 KLF18A0A0U1RQI7 1052 aa11.08□□□□□ -0.64
ACTN4-207ENST00000495553 K7ELQ4 463 aaPredicted RBP11.08□□□□□ -0.64
ACTN4-207ENST00000495553 ZBTB43O43298 467 aa11.08□□□□□ -0.64
ACTN4-207ENST00000495553 TOP1P11387 765 aaKnown RBP11.08□□□□□ -0.64
ACTN4-207ENST00000495553 KIF5BP33176 963 aa11.08□□□□□ -0.64
ACTN4-207ENST00000495553 GUCY1A2P33402 732 aa11.08□□□□□ -0.64
ACTN4-207ENST00000495553 RCAN1P53805 252 aa11.08□□□□□ -0.64
ACTN4-207ENST00000495553 ANTXR2P58335 489 aa11.08□□□□□ -0.64
ACTN4-207ENST00000495553 CRHR2Q13324 411 aa11.08□□□□□ -0.64
ACTN4-207ENST00000495553 MOGSQ13724 837 aa11.08□□□□□ -0.64
ACTN4-207ENST00000495553 ZYXQ15942 572 aaKnown RBP11.08□□□□□ -0.64
ACTN4-207ENST00000495553 SH3D19Q5HYK7 790 aa11.08□□□□□ -0.64
ACTN4-207ENST00000495553 GPAT2Q6NUI2 795 aa11.08□□□□□ -0.64
ACTN4-207ENST00000495553 USP17L2Q6R6M4 530 aa11.08□□□□□ -0.64
ACTN4-207ENST00000495553 NOL8Q76FK4 1167 aaKnown RBP11.08□□□□□ -0.64
ACTN4-207ENST00000495553 SGMS1Q86VZ5 419 aa11.08□□□□□ -0.64
ACTN4-207ENST00000495553 ENAHQ8N8S7 591 aaPredicted RBP11.08□□□□□ -0.64
ACTN4-207ENST00000495553 ACER1Q8TDN7 264 aa11.08□□□□□ -0.64
ACTN4-207ENST00000495553 IGDCC4Q8TDY8 1250 aa11.08□□□□□ -0.64
ACTN4-207ENST00000495553 ZNF274Q96GC6 653 aaPredicted RBP11.08□□□□□ -0.64
ACTN4-207ENST00000495553 TCEANC2Q96MN5 208 aa11.08□□□□□ -0.64
ACTN4-207ENST00000495553 PARK7Q99497 189 aaKnown RBP11.08□□□□□ -0.64
ACTN4-207ENST00000495553 AGXT2Q9BYV1 514 aa11.08□□□□□ -0.64
ACTN4-207ENST00000495553 SLKQ9H2G2 1235 aaPredicted RBP11.08□□□□□ -0.64
ACTN4-207ENST00000495553 LY9Q9HBG7 655 aa11.08□□□□□ -0.64
ACTN4-207ENST00000495553 MTMR4Q9NYA4 1195 aa11.08□□□□□ -0.64
ACTN4-207ENST00000495553 SYNPO2Q9UMS6 1093 aa11.08□□□□□ -0.64
ACTN4-207ENST00000495553 AGTPBP1Q9UPW5 1226 aa11.08□□□□□ -0.64
ACTN4-207ENST00000495553 THSD7BQ9C0I4 1608 aa11.08□□□□□ -0.64
ACTN4-207ENST00000495553 GOLGA8BA8MQT2 603 aa11.07□□□□□ -0.64
ACTN4-207ENST00000495553 CDKL5O76039 1030 aa11.07□□□□□ -0.64
ACTN4-207ENST00000495553 DDAH1O94760 285 aa11.07□□□□□ -0.64
ACTN4-207ENST00000495553 TOB2Q14106 344 aaPredicted RBP11.07□□□□□ -0.64
ACTN4-207ENST00000495553 CTCFLQ8NI51 663 aaPredicted RBP11.07□□□□□ -0.64
ACTN4-207ENST00000495553 ANKS1AQ92625 1134 aa11.07□□□□□ -0.64
ACTN4-207ENST00000495553 CEP95Q96GE4 821 aa11.07□□□□□ -0.64
ACTN4-207ENST00000495553 CFHR5Q9BXR6 569 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 169.9 ms