RNA–Protein interactions for RNA: ENST00000495122.1

CBX4-204, Transcript of chromobox 4, humanhuman

TSL 3

Gene CBX4, Length 490 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4-204ENST00000495122 HTTP42858 3142 aa18.89■□□□□ 0.61
CBX4-204ENST00000495122 GPR25O00155 361 aa18.89■□□□□ 0.61
CBX4-204ENST00000495122 PLCG2P16885 1265 aa18.89■□□□□ 0.61
CBX4-204ENST00000495122 CACNB3P54284 484 aa18.89■□□□□ 0.61
CBX4-204ENST00000495122 WTAPQ15007 396 aa18.89■□□□□ 0.61
CBX4-204ENST00000495122 APOBEC3HQ6NTF7 200 aaKnown RBP18.89■□□□□ 0.61
CBX4-204ENST00000495122 IFNL1Q8IU54 200 aa18.89■□□□□ 0.61
CBX4-204ENST00000495122 UBAC1Q9BSL1 405 aa18.89■□□□□ 0.61
CBX4-204ENST00000495122 ZBTB4Q9P1Z0 1013 aaPredicted RBP18.89■□□□□ 0.61
CBX4-204ENST00000495122 ORC3Q9UBD5 711 aaPredicted RBP18.89■□□□□ 0.61
CBX4-204ENST00000495122 GOLGA8AA7E2F4 631 aa18.88■□□□□ 0.61
CBX4-204ENST00000495122 IGF2BP3O00425 579 aaKnown RBP eCLIP18.88■□□□□ 0.61
CBX4-204ENST00000495122 ALDH1A1P00352 501 aa18.88■□□□□ 0.61
CBX4-204ENST00000495122 XRCC6P12956 609 aaKnown RBP eCLIP18.88■□□□□ 0.61
CBX4-204ENST00000495122 FDPSP14324 419 aaKnown RBP18.88■□□□□ 0.61
CBX4-204ENST00000495122 PRDX5P30044 214 aa18.88■□□□□ 0.61
CBX4-204ENST00000495122 INHBEP58166 350 aa18.88■□□□□ 0.61
CBX4-204ENST00000495122 CCDC178Q5BJE1 867 aa18.88■□□□□ 0.61
CBX4-204ENST00000495122 FKBP1CQ5VVH2 108 aa18.88■□□□□ 0.61
CBX4-204ENST00000495122 FAM83AQ86UY5 434 aa18.88■□□□□ 0.61
CBX4-204ENST00000495122 AMOTL1Q8IY63 956 aa18.88■□□□□ 0.61
CBX4-204ENST00000495122 FBXO18Q8NFZ0 1043 aa18.88■□□□□ 0.61
CBX4-204ENST00000495122 DDX55Q8NHQ9 600 aaKnown RBP eCLIP18.88■□□□□ 0.61
CBX4-204ENST00000495122 SDR42E1Q8WUS8 393 aa18.88■□□□□ 0.61
CBX4-204ENST00000495122 FAM163AQ96GL9 167 aaPredicted RBP18.88■□□□□ 0.61
CBX4-204ENST00000495122 C8orf76Q96K31 380 aa18.88■□□□□ 0.61
CBX4-204ENST00000495122 SPATA32Q96LK8 384 aa18.88■□□□□ 0.61
CBX4-204ENST00000495122 R3HDMLQ9H3Y0 253 aa18.88■□□□□ 0.61
CBX4-204ENST00000495122 TMOD2Q9NZR1 351 aa18.88■□□□□ 0.61
CBX4-204ENST00000495122 ROBO3Q96MS0 1386 aa18.88■□□□□ 0.61
CBX4-204ENST00000495122 MROH7-TTC4A0A0A0MT08 1334 aa18.87■□□□□ 0.61
CBX4-204ENST00000495122 GADD45BO75293 160 aaPredicted RBP18.87■□□□□ 0.61
CBX4-204ENST00000495122 CALM1P0DP23 149 aa18.87■□□□□ 0.61
CBX4-204ENST00000495122 CALM2P0DP24 149 aa18.87■□□□□ 0.61
CBX4-204ENST00000495122 CALM3P0DP25 149 aa18.87■□□□□ 0.61
CBX4-204ENST00000495122 IFNAR1P17181 557 aa18.87■□□□□ 0.61
CBX4-204ENST00000495122 DYNLL1P63167 89 aaKnown RBP18.87■□□□□ 0.61
CBX4-204ENST00000495122 CTR9Q6PD62 1173 aa18.87■□□□□ 0.61
CBX4-204ENST00000495122 PPP1R3FQ6ZSY5 799 aaPredicted RBP18.87■□□□□ 0.61
CBX4-204ENST00000495122 FERMT3Q86UX7 667 aa18.87■□□□□ 0.61
CBX4-204ENST00000495122 IQCA1Q86XH1 822 aa18.87■□□□□ 0.61
CBX4-204ENST00000495122 CHAMP1Q96JM3 812 aa18.87■□□□□ 0.61
CBX4-204ENST00000495122 ELP3Q9H9T3 547 aa18.87■□□□□ 0.61
CBX4-204ENST00000495122 DCP1AQ9NPI6 582 aaPredicted RBP18.87■□□□□ 0.61
CBX4-204ENST00000495122 GPHNQ9NQX3 736 aaPredicted RBP18.87■□□□□ 0.61
CBX4-204ENST00000495122 DDX52Q9Y2R4 599 aaKnown RBP eCLIP18.87■□□□□ 0.61
CBX4-204ENST00000495122 PDE4BQ07343 736 aa18.86■□□□□ 0.61
CBX4-204ENST00000495122 VGLL4Q14135 290 aa18.86■□□□□ 0.61
CBX4-204ENST00000495122 LEO1Q8WVC0 666 aaPredicted RBP18.86■□□□□ 0.61
CBX4-204ENST00000495122 OPTNQ96CV9 577 aa18.86■□□□□ 0.61
CBX4-204ENST00000495122 GDPD2Q9HCC8 539 aa18.86■□□□□ 0.61
CBX4-204ENST00000495122 DAGLAQ9Y4D2 1042 aa18.86■□□□□ 0.61
CBX4-204ENST00000495122 TESPA1A2RU30 521 aaPredicted RBP18.85■□□□□ 0.61
CBX4-204ENST00000495122 GOLGA6L4A6NEF3 574 aa18.85■□□□□ 0.61
CBX4-204ENST00000495122 MINDY4BA8MYZ0 360 aa18.85■□□□□ 0.61
CBX4-204ENST00000495122 FOXD4L6Q3SYB3 417 aaPredicted RBP18.85■□□□□ 0.61
CBX4-204ENST00000495122 FOXD4L3Q6VB84 417 aaPredicted RBP18.85■□□□□ 0.61
CBX4-204ENST00000495122 TTC6Q86TZ1 520 aa18.85■□□□□ 0.61
CBX4-204ENST00000495122 GAS2L3Q86XJ1 694 aa18.85■□□□□ 0.61
CBX4-204ENST00000495122 ANP32BQ92688 251 aaKnown RBP18.85■□□□□ 0.61
CBX4-204ENST00000495122 TOMM22Q9NS69 142 aa18.85■□□□□ 0.61
CBX4-204ENST00000495122 AATFQ9NY61 560 aaKnown RBP eCLIP18.85■□□□□ 0.618e-7■■□□□ 12.5
CBX4-204ENST00000495122 SIPA1L1O43166 1804 aa18.85■□□□□ 0.61
CBX4-204ENST00000495122 PDE4DIPQ5VU43 2346 aa18.85■□□□□ 0.61
CBX4-204ENST00000495122 BAZ2AQ9UIF9 1905 aaKnown RBP18.84■□□□□ 0.61
CBX4-204ENST00000495122 NAV1Q8NEY1 1877 aa18.84■□□□□ 0.61
CBX4-204ENST00000495122 FKTNO75072 461 aa18.84■□□□□ 0.61
CBX4-204ENST00000495122 DDAH1O94760 285 aa18.84■□□□□ 0.61
CBX4-204ENST00000495122 SEC23AQ15436 765 aa18.84■□□□□ 0.61
CBX4-204ENST00000495122 DIXDC1Q155Q3 683 aa18.84■□□□□ 0.61
CBX4-204ENST00000495122 NTRK3Q16288 839 aa18.84■□□□□ 0.61
CBX4-204ENST00000495122 PKN2Q16513 984 aaKnown RBP18.84■□□□□ 0.61
CBX4-204ENST00000495122 TRIM22Q8IYM9 498 aa18.84■□□□□ 0.61
CBX4-204ENST00000495122 CNKSR2Q8WXI2 1034 aa18.84■□□□□ 0.61
CBX4-204ENST00000495122 ZSCAN10Q96SZ4 725 aaPredicted RBP18.84■□□□□ 0.61
CBX4-204ENST00000495122 ZNF287Q9HBT7 754 aa18.84■□□□□ 0.61
CBX4-204ENST00000495122 DDX19AQ9NUU7 478 aaKnown RBP18.84■□□□□ 0.61
CBX4-204ENST00000495122 RBM28Q9NW13 759 aaKnown RBP18.84■□□□□ 0.61
CBX4-204ENST00000495122 RCOR1Q9UKL0 485 aa18.84■□□□□ 0.61
CBX4-204ENST00000495122 TACC3Q9Y6A5 838 aa18.84■□□□□ 0.61
CBX4-204ENST00000495122 GAKO14976 1311 aa18.83■□□□□ 0.61
CBX4-204ENST00000495122 USP17L12C9JPN9 530 aa18.83■□□□□ 0.6
CBX4-204ENST00000495122 USP17L21D6R901 530 aa18.83■□□□□ 0.6
CBX4-204ENST00000495122 FMNL1O95466 1100 aaPredicted RBP18.83■□□□□ 0.6
CBX4-204ENST00000495122 MAP3K9P80192 1104 aa18.83■□□□□ 0.6
CBX4-204ENST00000495122 MLLT1Q03111 559 aaPredicted RBP18.83■□□□□ 0.6
CBX4-204ENST00000495122 SSRP1Q08945 709 aaKnown RBP18.83■□□□□ 0.6
CBX4-204ENST00000495122 TRIM29Q14134 588 aa18.83■□□□□ 0.6
CBX4-204ENST00000495122 RTN1Q16799 776 aa18.83■□□□□ 0.6
CBX4-204ENST00000495122 RRP12Q5JTH9 1297 aaKnown RBP18.83■□□□□ 0.6
CBX4-204ENST00000495122 MICU3Q86XE3 530 aa18.83■□□□□ 0.6
CBX4-204ENST00000495122 MS4A4AQ96JQ5 239 aa18.83■□□□□ 0.6
CBX4-204ENST00000495122 PTPN18Q99952 460 aa18.83■□□□□ 0.6
CBX4-204ENST00000495122 RBM27Q9P2N5 1060 aaKnown RBP18.83■□□□□ 0.6
CBX4-204ENST00000495122 CSADQ9Y600 493 aa18.83■□□□□ 0.6
CBX4-204ENST00000495122 MYH1P12882 1939 aa18.82■□□□□ 0.6
CBX4-204ENST00000495122 CENPFP49454 3210 aa18.82■□□□□ 0.6
CBX4-204ENST00000495122 TNKSO95271 1327 aa18.82■□□□□ 0.6
CBX4-204ENST00000495122 GPR75-ASB3A0A0A6YYF3 556 aa18.82■□□□□ 0.6
CBX4-204ENST00000495122 CDC42EP5Q6NZY7 148 aa18.82■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms