RNA–Protein interactions for RNA: ENST00000494980.5

CHMP2B-205, Transcript of charged multivesicular body protein 2B, humanhuman

TSL 3 BASIC

Gene CHMP2B, Length 1,175 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2B-205ENST00000494980 CDK5RAP2Q96SN8 1893 aa18.2■□□□□ 0.5
CHMP2B-205ENST00000494980 DCXO43602 365 aa18.19■□□□□ 0.5
CHMP2B-205ENST00000494980 GFRA3O60609 400 aa18.19■□□□□ 0.5
CHMP2B-205ENST00000494980 FGBP02675 491 aa18.19■□□□□ 0.5
CHMP2B-205ENST00000494980 TSR2Q969E8 191 aaKnown RBP18.19■□□□□ 0.5
CHMP2B-205ENST00000494980 KAZALD1Q96I82 304 aa18.19■□□□□ 0.5
CHMP2B-205ENST00000494980 SUCLG2Q96I99 432 aa18.19■□□□□ 0.5
CHMP2B-205ENST00000494980 COBLO75128 1261 aa18.18■□□□□ 0.5
CHMP2B-205ENST00000494980 CYP2C18P33260 490 aa18.18■□□□□ 0.5
CHMP2B-205ENST00000494980 ACLYP53396 1101 aa18.18■□□□□ 0.5
CHMP2B-205ENST00000494980 RHBDL3P58872 404 aa18.18■□□□□ 0.5
CHMP2B-205ENST00000494980 TWISTNBQ3B726 338 aaPredicted RBP18.18■□□□□ 0.5
CHMP2B-205ENST00000494980 SAMD1Q6SPF0 538 aaPredicted RBP18.18■□□□□ 0.5
CHMP2B-205ENST00000494980 PRSS33Q8NF86 280 aa18.18■□□□□ 0.5
CHMP2B-205ENST00000494980 NUP133Q8WUM0 1156 aa18.18■□□□□ 0.5
CHMP2B-205ENST00000494980 LENG1Q96BZ8 264 aaPredicted RBP18.18■□□□□ 0.5
CHMP2B-205ENST00000494980 HERC5Q9UII4 1024 aaKnown RBP18.18■□□□□ 0.5
CHMP2B-205ENST00000494980 MROH7-TTC4A0A0A0MT08 1334 aa18.18■□□□□ 0.5
CHMP2B-205ENST00000494980 MROH7Q68CQ1 1323 aa18.18■□□□□ 0.5
CHMP2B-205ENST00000494980 NPM3O75607 178 aaKnown RBP18.17■□□□□ 0.5
CHMP2B-205ENST00000494980 CA3P07451 260 aa18.17■□□□□ 0.5
CHMP2B-205ENST00000494980 USP17L2Q6R6M4 530 aa18.17■□□□□ 0.5
CHMP2B-205ENST00000494980 KLHDC4Q8TBB5 520 aa18.17■□□□□ 0.5
CHMP2B-205ENST00000494980 SLC4A7Q9Y6M7 1214 aa18.17■□□□□ 0.5
CHMP2B-205ENST00000494980 VPS13AQ96RL7 3174 aa18.17■□□□□ 0.5
CHMP2B-205ENST00000494980 TPRP12270 2363 aaKnown RBP18.17■□□□□ 0.5
CHMP2B-205ENST00000494980 USP17L15C9J2P7 530 aa18.16■□□□□ 0.5
CHMP2B-205ENST00000494980 USP17L13C9JLJ4 530 aa18.16■□□□□ 0.5
CHMP2B-205ENST00000494980 USP17L11C9JVI0 530 aa18.16■□□□□ 0.5
CHMP2B-205ENST00000494980 USP17L18D6R9N7 530 aa18.16■□□□□ 0.5
CHMP2B-205ENST00000494980 USP17L22D6RA61 530 aa18.16■□□□□ 0.5
CHMP2B-205ENST00000494980 USP17L17D6RBQ6 530 aa18.16■□□□□ 0.5
CHMP2B-205ENST00000494980 USP17L19D6RCP7 530 aa18.16■□□□□ 0.5
CHMP2B-205ENST00000494980 USP17L20D6RJB6 530 aa18.16■□□□□ 0.5
CHMP2B-205ENST00000494980 GDF11O95390 407 aa18.16■□□□□ 0.5
CHMP2B-205ENST00000494980 USP17L24Q0WX57 530 aa18.16■□□□□ 0.5
CHMP2B-205ENST00000494980 ZYXQ15942 572 aaKnown RBP18.16■□□□□ 0.5
CHMP2B-205ENST00000494980 SLF2Q8IX21 1173 aa18.16■□□□□ 0.5
CHMP2B-205ENST00000494980 ARNTL2Q8WYA1 636 aa18.16■□□□□ 0.5
CHMP2B-205ENST00000494980 LPIN2Q92539 896 aa18.16■□□□□ 0.5
CHMP2B-205ENST00000494980 TECTAO75443 2155 aa18.15■□□□□ 0.5
CHMP2B-205ENST00000494980 ADAMTS4O75173 837 aa18.15■□□□□ 0.5
CHMP2B-205ENST00000494980 PTPN5P54829 565 aa18.15■□□□□ 0.5
CHMP2B-205ENST00000494980 WDR43Q15061 677 aaKnown RBP eCLIP18.15■□□□□ 0.5
CHMP2B-205ENST00000494980 FAM163AQ96GL9 167 aaPredicted RBP18.15■□□□□ 0.5
CHMP2B-205ENST00000494980 MFSD14AQ96MC6 490 aa18.15■□□□□ 0.5
CHMP2B-205ENST00000494980 TSEN34Q9BSV6 310 aaKnown RBP18.15■□□□□ 0.5
CHMP2B-205ENST00000494980 GNL3LQ9NVN8 582 aaKnown RBP18.15■□□□□ 0.5
CHMP2B-205ENST00000494980 ZBTB21Q9ULJ3 1066 aa18.15■□□□□ 0.5
CHMP2B-205ENST00000494980 ROBO3Q96MS0 1386 aa18.15■□□□□ 0.5
CHMP2B-205ENST00000494980 POTEB3A0JP26 581 aa18.14■□□□□ 0.49
CHMP2B-205ENST00000494980 IL9P15248 144 aa18.14■□□□□ 0.49
CHMP2B-205ENST00000494980 ATP2A2P16615 1042 aaKnown RBP18.14■□□□□ 0.49
CHMP2B-205ENST00000494980 POTEBQ6S5H4 581 aa18.14■□□□□ 0.49
CHMP2B-205ENST00000494980 LBX2Q6XYB7 198 aa18.14■□□□□ 0.49
CHMP2B-205ENST00000494980 ZGPATQ8N5A5 531 aaKnown RBP18.14■□□□□ 0.49
CHMP2B-205ENST00000494980 MAML3Q96JK9 1138 aa18.14■□□□□ 0.49
CHMP2B-205ENST00000494980 BICC1Q9H694 974 aaKnown RBP18.14■□□□□ 0.49
CHMP2B-205ENST00000494980 SLC5A4Q9NY91 659 aa18.14■□□□□ 0.49
CHMP2B-205ENST00000494980 DENND2AQ9ULE3 1009 aa18.14■□□□□ 0.49
CHMP2B-205ENST00000494980 ZFHX4Q86UP3 3567 aa18.14■□□□□ 0.49
CHMP2B-205ENST00000494980 CHD8Q9HCK8 2581 aa18.14■□□□□ 0.49
CHMP2B-205ENST00000494980 GPR75-ASB3A0A0A6YYF3 556 aa18.13■□□□□ 0.49
CHMP2B-205ENST00000494980 MOXD2PA6NHM9 499 aa18.13■□□□□ 0.49
CHMP2B-205ENST00000494980 SPDYE16A6NNV3 312 aaPredicted RBP18.13■□□□□ 0.49
CHMP2B-205ENST00000494980 ZBBXA8MT70 800 aa18.13■□□□□ 0.49
CHMP2B-205ENST00000494980 STRNO43815 780 aa18.13■□□□□ 0.49
CHMP2B-205ENST00000494980 GRB10Q13322 594 aa18.13■□□□□ 0.49
CHMP2B-205ENST00000494980 TMEM67Q5HYA8 995 aa18.13■□□□□ 0.49
CHMP2B-205ENST00000494980 CATSPERGQ6ZRH7 1159 aa18.13■□□□□ 0.49
CHMP2B-205ENST00000494980 FEZ1Q99689 392 aa18.13■□□□□ 0.49
CHMP2B-205ENST00000494980 MOV10L1Q9BXT6 1211 aaKnown RBP18.13■□□□□ 0.49
CHMP2B-205ENST00000494980 UBE2ZQ9H832 354 aaPredicted RBP18.13■□□□□ 0.49
CHMP2B-205ENST00000494980 ABCF2Q9UG63 623 aa18.13■□□□□ 0.49
CHMP2B-205ENST00000494980 ADAMTS8Q9UP79 889 aa18.13■□□□□ 0.49
CHMP2B-205ENST00000494980 SYNRGQ9UMZ2 1314 aa18.13■□□□□ 0.49
CHMP2B-205ENST00000494980 GVINP1Q7Z2Y8 2422 aa18.13■□□□□ 0.49
CHMP2B-205ENST00000494980 NCOR2Q9Y618 2525 aa18.12■□□□□ 0.49
CHMP2B-205ENST00000494980 TAL1P17542 331 aaPredicted RBP18.12■□□□□ 0.49
CHMP2B-205ENST00000494980 CDK7P50613 346 aa18.12■□□□□ 0.49
CHMP2B-205ENST00000494980 ERMP1Q7Z2K6 904 aa18.12■□□□□ 0.49
CHMP2B-205ENST00000494980 C12orf42Q96LP6 360 aa18.12■□□□□ 0.49
CHMP2B-205ENST00000494980 DNAJC18Q9H819 358 aa18.12■□□□□ 0.49
CHMP2B-205ENST00000494980 NRBP1Q9UHY1 535 aa18.12■□□□□ 0.49
CHMP2B-205ENST00000494980 PKD1L2Q7Z442 2459 aa18.12■□□□□ 0.49
CHMP2B-205ENST00000494980 VCAM1P19320 739 aa18.11■□□□□ 0.49
CHMP2B-205ENST00000494980 ERCC3P19447 782 aa18.11■□□□□ 0.49
CHMP2B-205ENST00000494980 PHKA1P46020 1223 aa18.11■□□□□ 0.49
CHMP2B-205ENST00000494980 KCNA10Q16322 511 aa18.11■□□□□ 0.49
CHMP2B-205ENST00000494980 LEXMQ3ZCV2 418 aa18.11■□□□□ 0.49
CHMP2B-205ENST00000494980 FAM126BQ8IXS8 530 aa18.11■□□□□ 0.49
CHMP2B-205ENST00000494980 GADD45GIP1Q8TAE8 222 aaPredicted RBP18.11■□□□□ 0.49
CHMP2B-205ENST00000494980 GLT1D1Q96MS3 346 aa18.11■□□□□ 0.49
CHMP2B-205ENST00000494980 PI4KBQ9UBF8 816 aa18.11■□□□□ 0.49
CHMP2B-205ENST00000494980 UMODL1Q5DID0 1318 aa18.11■□□□□ 0.49
CHMP2B-205ENST00000494980 ELP1O95163 1332 aa18.1■□□□□ 0.49
CHMP2B-205ENST00000494980 APAF1O14727 1248 aa18.1■□□□□ 0.49
CHMP2B-205ENST00000494980 SEMA3EO15041 775 aa18.1■□□□□ 0.49
CHMP2B-205ENST00000494980 KRT37O76014 449 aa18.1■□□□□ 0.49
CHMP2B-205ENST00000494980 ARHGEF15O94989 841 aa18.1■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms