RNA–Protein interactions for RNA: ENST00000494893.5

SNX17-209, Transcript of sorting nexin 17, humanhuman

TSL 2

Gene SNX17, Length 966 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-209ENST00000494893 IRX3P78415 501 aaPredicted RBP20.31■□□□□ 0.84
SNX17-209ENST00000494893 USP17L24Q0WX57 530 aa20.31■□□□□ 0.84
SNX17-209ENST00000494893 SPICE1Q8N0Z3 855 aa20.31■□□□□ 0.84
SNX17-209ENST00000494893 ANKRD13CQ8N6S4 541 aa20.31■□□□□ 0.84
SNX17-209ENST00000494893 STAG1Q8WVM7 1258 aa20.31■□□□□ 0.84
SNX17-209ENST00000494893 RUFY2Q8WXA3 655 aa20.31■□□□□ 0.84
SNX17-209ENST00000494893 TXNRD2Q9NNW7 524 aa20.31■□□□□ 0.84
SNX17-209ENST00000494893 TRIM17Q9Y577 477 aa20.31■□□□□ 0.84
SNX17-209ENST00000494893 LAMA4Q16363 1823 aa20.31■□□□□ 0.84
SNX17-209ENST00000494893 NEDD4P46934 1319 aa20.3■□□□□ 0.84
SNX17-209ENST00000494893 NMT2O60551 498 aa20.3■□□□□ 0.84
SNX17-209ENST00000494893 TSPY3P0CV98 308 aa20.3■□□□□ 0.84
SNX17-209ENST00000494893 TSPY8P0CW00 308 aa20.3■□□□□ 0.84
SNX17-209ENST00000494893 AKNAD1Q5T1N1 836 aa20.3■□□□□ 0.84
SNX17-209ENST00000494893 TRIM47Q96LD4 638 aa20.3■□□□□ 0.84
SNX17-209ENST00000494893 SH2D4AQ9H788 454 aa20.3■□□□□ 0.84
SNX17-209ENST00000494893 EFCC1Q9HA90 598 aa20.3■□□□□ 0.84
SNX17-209ENST00000494893 RBPJLQ9UBG7 517 aa20.3■□□□□ 0.84
SNX17-209ENST00000494893 MORF4L1Q9UBU8 362 aa20.3■□□□□ 0.84
SNX17-209ENST00000494893 CLIP2Q9UDT6 1046 aa20.3■□□□□ 0.84
SNX17-209ENST00000494893 ZNF213O14771 459 aa20.29■□□□□ 0.84
SNX17-209ENST00000494893 RANBP6O60518 1105 aaKnown RBP20.29■□□□□ 0.84
SNX17-209ENST00000494893 CNMDO75829 334 aa20.29■□□□□ 0.84
SNX17-209ENST00000494893 GCLCP48506 637 aaPredicted RBP20.29■□□□□ 0.84
SNX17-209ENST00000494893 NOVP48745 357 aa20.29■□□□□ 0.84
SNX17-209ENST00000494893 FAM110CQ1W6H9 321 aa20.29■□□□□ 0.84
SNX17-209ENST00000494893 LPAR1Q92633 364 aa20.29■□□□□ 0.84
SNX17-209ENST00000494893 MKL1Q969V6 931 aa20.29■□□□□ 0.84
SNX17-209ENST00000494893 ESYT1Q9BSJ8 1104 aa20.29■□□□□ 0.84
SNX17-209ENST00000494893 TAF6LQ9Y6J9 622 aa20.29■□□□□ 0.84
SNX17-209ENST00000494893 RLFQ13129 1914 aa20.28■□□□□ 0.84
SNX17-209ENST00000494893 TSPY2A6NKD2 308 aa20.28■□□□□ 0.84
SNX17-209ENST00000494893 SPDYE16A6NNV3 312 aaPredicted RBP20.28■□□□□ 0.84
SNX17-209ENST00000494893 PSMC4P43686 418 aa20.28■□□□□ 0.84
SNX17-209ENST00000494893 RRP12Q5JTH9 1297 aaKnown RBP20.28■□□□□ 0.84
SNX17-209ENST00000494893 ABHD8Q96I13 439 aa20.28■□□□□ 0.84
SNX17-209ENST00000494893 WDR46O15213 610 aaKnown RBP20.27■□□□□ 0.84
SNX17-209ENST00000494893 TTLL1O95922 423 aa20.27■□□□□ 0.84
SNX17-209ENST00000494893 Q3C1V9 767 aa20.27■□□□□ 0.84
SNX17-209ENST00000494893 FBXO46Q6PJ61 603 aaPredicted RBP20.27■□□□□ 0.84
SNX17-209ENST00000494893 MFSD6Q6ZSS7 791 aa20.27■□□□□ 0.84
SNX17-209ENST00000494893 LRRC47Q8N1G4 583 aaKnown RBP20.27■□□□□ 0.84
SNX17-209ENST00000494893 NUP88Q99567 741 aaPredicted RBP20.27■□□□□ 0.84
SNX17-209ENST00000494893 LSG1Q9H089 658 aaKnown RBP20.27■□□□□ 0.84
SNX17-209ENST00000494893 PTPN22Q9Y2R2 807 aa20.27■□□□□ 0.84
SNX17-209ENST00000494893 F5H6K3 240 aa20.26■□□□□ 0.83
SNX17-209ENST00000494893 NDUFB10O96000 172 aa20.26■□□□□ 0.83
SNX17-209ENST00000494893 KLRC3Q07444 240 aa20.26■□□□□ 0.83
SNX17-209ENST00000494893 LBX2Q6XYB7 198 aa20.26■□□□□ 0.83
SNX17-209ENST00000494893 MAP4K1Q92918 833 aa20.26■□□□□ 0.83
SNX17-209ENST00000494893 TANGO6Q9C0B7 1094 aa20.26■□□□□ 0.83
SNX17-209ENST00000494893 TOMM22Q9NS69 142 aa20.26■□□□□ 0.83
SNX17-209ENST00000494893 FBXO28Q9NVF7 368 aa20.26■□□□□ 0.83
SNX17-209ENST00000494893 BTBD7Q9P203 1132 aa20.26■□□□□ 0.83
SNX17-209ENST00000494893 CTNNA3Q9UI47 895 aa20.26■□□□□ 0.83
SNX17-209ENST00000494893 CYP21A2P08686 494 aa20.25■□□□□ 0.83
SNX17-209ENST00000494893 PCP11498 1178 aaKnown RBP20.25■□□□□ 0.83
SNX17-209ENST00000494893 KIF22Q14807 665 aa20.25■□□□□ 0.83
SNX17-209ENST00000494893 PKN2Q16513 984 aaKnown RBP20.25■□□□□ 0.83
SNX17-209ENST00000494893 IMMTQ16891 758 aaKnown RBP20.25■□□□□ 0.83
SNX17-209ENST00000494893 FAM83BQ5T0W9 1011 aa20.25■□□□□ 0.83
SNX17-209ENST00000494893 RASGRP2Q7LDG7 609 aa20.25■□□□□ 0.83
SNX17-209ENST00000494893 GOPCQ9HD26 462 aa20.25■□□□□ 0.83
SNX17-209ENST00000494893 TCP11L1Q9NUJ3 509 aa20.25■□□□□ 0.83
SNX17-209ENST00000494893 HPS5Q9UPZ3 1129 aa20.25■□□□□ 0.83
SNX17-209ENST00000494893 A0A0G2JMZ2 1700 aa20.24■□□□□ 0.83
SNX17-209ENST00000494893 DSG3P32926 999 aa20.24■□□□□ 0.83
SNX17-209ENST00000494893 ERVK-9P63128 1117 aa20.24■□□□□ 0.83
SNX17-209ENST00000494893 ERVK-24P63145 666 aa20.24■□□□□ 0.83
SNX17-209ENST00000494893 COG2Q14746 738 aa20.24■□□□□ 0.83
SNX17-209ENST00000494893 RCSD1Q6JBY9 416 aa20.24■□□□□ 0.83
SNX17-209ENST00000494893 GMCL1P1Q8NEA9 526 aa20.24■□□□□ 0.83
SNX17-209ENST00000494893 PAGR1Q9BTK6 254 aa20.24■□□□□ 0.83
SNX17-209ENST00000494893 RNF41Q9H4P4 317 aaPredicted RBP20.24■□□□□ 0.83
SNX17-209ENST00000494893 SYNPO2Q9UMS6 1093 aa20.24■□□□□ 0.83
SNX17-209ENST00000494893 PTCH2Q9Y6C5 1203 aa20.24■□□□□ 0.83
SNX17-209ENST00000494893 U3KPZ7 1027 aaPredicted RBP20.24■□□□□ 0.83
SNX17-209ENST00000494893 B4E1Z4 1266 aa20.23■□□□□ 0.83
SNX17-209ENST00000494893 RAD21O60216 631 aa20.23■□□□□ 0.83
SNX17-209ENST00000494893 CDC45O75419 566 aa20.23■□□□□ 0.83
SNX17-209ENST00000494893 FMNL1O95466 1100 aaPredicted RBP20.23■□□□□ 0.83
SNX17-209ENST00000494893 GTF3C2Q8WUA4 911 aaPredicted RBP20.23■□□□□ 0.83
SNX17-209ENST00000494893 ATG4CQ96DT6 458 aa20.23■□□□□ 0.83
SNX17-209ENST00000494893 PORCNQ9H237 461 aa20.23■□□□□ 0.83
SNX17-209ENST00000494893 SRRDQ9UH36 339 aa20.23■□□□□ 0.83
SNX17-209ENST00000494893 GABRQQ9UN88 632 aa20.23■□□□□ 0.83
SNX17-209ENST00000494893 STX8Q9UNK0 236 aa20.23■□□□□ 0.83
SNX17-209ENST00000494893 RABGAP1Q9Y3P9 1069 aa20.23■□□□□ 0.83
SNX17-209ENST00000494893 RBM8AQ9Y5S9 174 aaKnown RBP20.23■□□□□ 0.83
SNX17-209ENST00000494893 MYH4Q9Y623 1939 aa20.23■□□□□ 0.83
SNX17-209ENST00000494893 PARP14Q460N5 1801 aa20.23■□□□□ 0.83
SNX17-209ENST00000494893 KDM4AO75164 1064 aa20.22■□□□□ 0.83
SNX17-209ENST00000494893 FLOT1O75955 427 aa20.22■□□□□ 0.83
SNX17-209ENST00000494893 FCGRTP55899 365 aa20.22■□□□□ 0.83
SNX17-209ENST00000494893 STOX1Q6ZVD7 989 aa20.22■□□□□ 0.83
SNX17-209ENST00000494893 GPRC5AQ8NFJ5 357 aa20.22■□□□□ 0.83
SNX17-209ENST00000494893 ADAMTS5Q9UNA0 930 aa20.22■□□□□ 0.83
SNX17-209ENST00000494893 GNRH1P01148 92 aa20.21■□□□□ 0.83
SNX17-209ENST00000494893 PRKCZQ05513 592 aa20.21■□□□□ 0.83
SNX17-209ENST00000494893 ARHGEF6Q15052 776 aa20.21■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms