RNA–Protein interactions for RNA: ENST00000494649.5

APTX-230, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 2,099 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-230ENST00000494649 NECTIN1Q15223 517 aa13.13□□□□□ -0.31
APTX-230ENST00000494649 CYB5R4Q7L1T6 521 aa13.13□□□□□ -0.31
APTX-230ENST00000494649 GREB1LQ9C091 1923 aaPredicted RBP13.13□□□□□ -0.31
APTX-230ENST00000494649 CTCFP49711 727 aaPredicted RBP13.12□□□□□ -0.31
APTX-230ENST00000494649 USP14P54578 494 aa13.12□□□□□ -0.31
APTX-230ENST00000494649 IRX3P78415 501 aaPredicted RBP13.12□□□□□ -0.31
APTX-230ENST00000494649 RASEFQ8IZ41 740 aa13.12□□□□□ -0.31
APTX-230ENST00000494649 TNS4Q8IZW8 715 aa13.12□□□□□ -0.31
APTX-230ENST00000494649 ASCC2Q9H1I8 757 aaPredicted RBP13.12□□□□□ -0.31
APTX-230ENST00000494649 VCPKMTQ9H867 229 aa13.12□□□□□ -0.31
APTX-230ENST00000494649 ZFYVE28Q9HCC9 887 aa13.12□□□□□ -0.31
APTX-230ENST00000494649 F5H6K3 240 aa13.12□□□□□ -0.31
APTX-230ENST00000494649 SEC24BO95487 1268 aa13.12□□□□□ -0.31
APTX-230ENST00000494649 KLRC3Q07444 240 aa13.12□□□□□ -0.31
APTX-230ENST00000494649 TRDNQ13061 729 aa13.12□□□□□ -0.31
APTX-230ENST00000494649 FAM83BQ5T0W9 1011 aa13.12□□□□□ -0.31
APTX-230ENST00000494649 RALYLQ86SE5 291 aaKnown RBP13.12□□□□□ -0.31
APTX-230ENST00000494649 ANKRD13CQ8N6S4 541 aa13.12□□□□□ -0.31
APTX-230ENST00000494649 ZNF296Q8WUU4 475 aaPredicted RBP13.12□□□□□ -0.31
APTX-230ENST00000494649 SAGE1Q9NXZ1 904 aa13.12□□□□□ -0.31
APTX-230ENST00000494649 TAOK2Q9UL54 1235 aa13.12□□□□□ -0.31
APTX-230ENST00000494649 PLIN4Q96Q06 1357 aa13.12□□□□□ -0.31
APTX-230ENST00000494649 LOC285556D6RIA3 1793 aa13.11□□□□□ -0.31
APTX-230ENST00000494649 GPR25O00155 361 aa13.11□□□□□ -0.31
APTX-230ENST00000494649 NDUFB10O96000 172 aa13.11□□□□□ -0.31
APTX-230ENST00000494649 ADCK5Q3MIX3 580 aa13.11□□□□□ -0.31
APTX-230ENST00000494649 TCEANC2Q96MN5 208 aa13.11□□□□□ -0.31
APTX-230ENST00000494649 PARK7Q99497 189 aaKnown RBP13.11□□□□□ -0.31
APTX-230ENST00000494649 P2RX7Q99572 595 aaKnown RBP13.11□□□□□ -0.31
APTX-230ENST00000494649 LRRC2Q9BYS8 371 aa13.11□□□□□ -0.31
APTX-230ENST00000494649 KRT23Q9C075 422 aa13.11□□□□□ -0.31
APTX-230ENST00000494649 SH2D4AQ9H788 454 aa13.11□□□□□ -0.31
APTX-230ENST00000494649 GOPCQ9HD26 462 aa13.11□□□□□ -0.31
APTX-230ENST00000494649 FBXO28Q9NVF7 368 aa13.11□□□□□ -0.31
APTX-230ENST00000494649 NYAP2Q9P242 653 aa13.11□□□□□ -0.31
APTX-230ENST00000494649 CASP8AP2Q9UKL3 1982 aa13.11□□□□□ -0.31
APTX-230ENST00000494649 MYH4Q9Y623 1939 aa13.11□□□□□ -0.31
APTX-230ENST00000494649 TNKSO95271 1327 aa13.11□□□□□ -0.31
APTX-230ENST00000494649 TLR2O60603 784 aa13.11□□□□□ -0.31
APTX-230ENST00000494649 REC8O95072 547 aa13.11□□□□□ -0.31
APTX-230ENST00000494649 MCCP23508 829 aa13.11□□□□□ -0.31
APTX-230ENST00000494649 CAP1Q01518 475 aa13.11□□□□□ -0.31
APTX-230ENST00000494649 NCOA7Q8NI08 942 aa13.11□□□□□ -0.31
APTX-230ENST00000494649 TMEM47Q9BQJ4 181 aa13.11□□□□□ -0.31
APTX-230ENST00000494649 PAGR1Q9BTK6 254 aa13.11□□□□□ -0.31
APTX-230ENST00000494649 CNNM2Q9H8M5 875 aa13.11□□□□□ -0.31
APTX-230ENST00000494649 GPHNQ9NQX3 736 aaPredicted RBP13.11□□□□□ -0.31
APTX-230ENST00000494649 FLOT1O75955 427 aa13.1□□□□□ -0.31
APTX-230ENST00000494649 PCP11498 1178 aaKnown RBP13.1□□□□□ -0.31
APTX-230ENST00000494649 CPA1P15085 419 aa13.1□□□□□ -0.31
APTX-230ENST00000494649 OSBPP22059 807 aa13.1□□□□□ -0.31
APTX-230ENST00000494649 RCSD1Q6JBY9 416 aa13.1□□□□□ -0.31
APTX-230ENST00000494649 IQCA1Q86XH1 822 aa13.1□□□□□ -0.31
APTX-230ENST00000494649 C12orf42Q96LP6 360 aa13.1□□□□□ -0.31
APTX-230ENST00000494649 ZSCAN10Q96SZ4 725 aaPredicted RBP13.1□□□□□ -0.31
APTX-230ENST00000494649 UBAC1Q9BSL1 405 aa13.1□□□□□ -0.31
APTX-230ENST00000494649 ARHGAP39Q9C0H5 1083 aa13.1□□□□□ -0.31
APTX-230ENST00000494649 SENP2Q9HC62 589 aa13.1□□□□□ -0.31
APTX-230ENST00000494649 SLFN13Q68D06 897 aa13.09□□□□□ -0.31
APTX-230ENST00000494649 POTEEQ6S8J3 1075 aa13.09□□□□□ -0.31
APTX-230ENST00000494649 KCTD1Q719H9 257 aa13.09□□□□□ -0.31
APTX-230ENST00000494649 ENAHQ8N8S7 591 aaPredicted RBP13.09□□□□□ -0.31
APTX-230ENST00000494649 TXNRD2Q9NNW7 524 aa13.09□□□□□ -0.31
APTX-230ENST00000494649 FRMPD2Q68DX3 1309 aaPredicted RBP13.09□□□□□ -0.31
APTX-230ENST00000494649 USP17L15C9J2P7 530 aa13.09□□□□□ -0.31
APTX-230ENST00000494649 USP17L13C9JLJ4 530 aa13.09□□□□□ -0.31
APTX-230ENST00000494649 USP17L11C9JVI0 530 aa13.09□□□□□ -0.31
APTX-230ENST00000494649 USP17L18D6R9N7 530 aa13.09□□□□□ -0.31
APTX-230ENST00000494649 USP17L22D6RA61 530 aa13.09□□□□□ -0.31
APTX-230ENST00000494649 USP17L17D6RBQ6 530 aa13.09□□□□□ -0.31
APTX-230ENST00000494649 USP17L19D6RCP7 530 aa13.09□□□□□ -0.31
APTX-230ENST00000494649 USP17L20D6RJB6 530 aa13.09□□□□□ -0.31
APTX-230ENST00000494649 ANTXR2P58335 489 aa13.09□□□□□ -0.31
APTX-230ENST00000494649 HERVK_113P62684 666 aa13.09□□□□□ -0.31
APTX-230ENST00000494649 USP17L24Q0WX57 530 aa13.09□□□□□ -0.31
APTX-230ENST00000494649 PABPC4Q13310 644 aaKnown RBP eCLIP13.09□□□□□ -0.31
APTX-230ENST00000494649 RNF20Q5VTR2 975 aa13.09□□□□□ -0.31
APTX-230ENST00000494649 CATSPERGQ6ZRH7 1159 aa13.09□□□□□ -0.31
APTX-230ENST00000494649 CD99L2Q8TCZ2 262 aa13.09□□□□□ -0.31
APTX-230ENST00000494649 PNMA3Q9UL41 463 aa13.09□□□□□ -0.31
APTX-230ENST00000494649 HTTP42858 3142 aa13.08□□□□□ -0.31
APTX-230ENST00000494649 IFIT3O14879 490 aaKnown RBP13.08□□□□□ -0.32
APTX-230ENST00000494649 HOXA7P31268 230 aaPredicted RBP13.08□□□□□ -0.32
APTX-230ENST00000494649 IKQ13123 557 aaPredicted RBP13.08□□□□□ -0.32
APTX-230ENST00000494649 C8orf34Q49A92 452 aa13.08□□□□□ -0.32
APTX-230ENST00000494649 MB21D2Q8IYB1 491 aaPredicted RBP13.08□□□□□ -0.32
APTX-230ENST00000494649 LPAR1Q92633 364 aa13.08□□□□□ -0.32
APTX-230ENST00000494649 MKL1Q969V6 931 aa13.08□□□□□ -0.32
APTX-230ENST00000494649 USP26Q9BXU7 913 aa13.08□□□□□ -0.32
APTX-230ENST00000494649 ZSWIM8A7E2V4 1837 aa13.08□□□□□ -0.32
APTX-230ENST00000494649 BRCA2P51587 3418 aa13.08□□□□□ -0.32
APTX-230ENST00000494649 GOLGA8HP0CJ92 632 aa13.08□□□□□ -0.32
APTX-230ENST00000494649 ZKSCAN1P17029 563 aaPredicted RBP13.08□□□□□ -0.32
APTX-230ENST00000494649 HSPA4P34932 840 aa13.08□□□□□ -0.32
APTX-230ENST00000494649 SLC1A4P43007 532 aa13.08□□□□□ -0.32
APTX-230ENST00000494649 SLC4A3P48751 1232 aa13.08□□□□□ -0.32
APTX-230ENST00000494649 SP3Q02447 781 aa13.08□□□□□ -0.32
APTX-230ENST00000494649 CCDC96Q2M329 555 aa13.08□□□□□ -0.32
APTX-230ENST00000494649 C17orf99Q6UX52 265 aa13.08□□□□□ -0.32
APTX-230ENST00000494649 RAB11FIP4Q86YS3 637 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms