RNA–Protein interactions for RNA: ENST00000494572.1

KRTCAP3-206, Transcript of keratinocyte associated protein 3, humanhuman

TSL 3

Gene KRTCAP3, Length 505 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KRTCAP3-206ENST00000494572 CNTNAP1P78357 1384 aa13.01□□□□□ -0.33
KRTCAP3-206ENST00000494572 PLIN4Q96Q06 1357 aa13.01□□□□□ -0.33
KRTCAP3-206ENST00000494572 ZNF646O15015 1829 aaPredicted RBP13.01□□□□□ -0.33
KRTCAP3-206ENST00000494572 PSME4Q14997 1843 aa13.01□□□□□ -0.33
KRTCAP3-206ENST00000494572 ARFGEF1Q9Y6D6 1849 aa13.01□□□□□ -0.33
KRTCAP3-206ENST00000494572 CDK5RAP2Q96SN8 1893 aa13.01□□□□□ -0.33
KRTCAP3-206ENST00000494572 COL2A1P02458 1487 aaPredicted RBP13□□□□□ -0.33
KRTCAP3-206ENST00000494572 TRAK2O60296 914 aa13□□□□□ -0.33
KRTCAP3-206ENST00000494572 GDF11O95390 407 aa13□□□□□ -0.33
KRTCAP3-206ENST00000494572 EGFRP00533 1210 aa13□□□□□ -0.33
KRTCAP3-206ENST00000494572 LMOD1P29536 600 aaPredicted RBP13□□□□□ -0.33
KRTCAP3-206ENST00000494572 GUCY1A2P33402 732 aa13□□□□□ -0.33
KRTCAP3-206ENST00000494572 NOVP48745 357 aa13□□□□□ -0.33
KRTCAP3-206ENST00000494572 KRT85P78386 507 aa13□□□□□ -0.33
KRTCAP3-206ENST00000494572 DNM1Q05193 864 aaKnown RBP13□□□□□ -0.33
KRTCAP3-206ENST00000494572 SAFBQ15424 915 aaKnown RBP eCLIP13□□□□□ -0.33
KRTCAP3-206ENST00000494572 KRT40Q6A162 431 aa13□□□□□ -0.33
KRTCAP3-206ENST00000494572 PIBF1Q8WXW3 757 aa13□□□□□ -0.33
KRTCAP3-206ENST00000494572 LMBRD1Q9NUN5 540 aa13□□□□□ -0.33
KRTCAP3-206ENST00000494572 MAD2L2Q9UI95 211 aa13□□□□□ -0.33
KRTCAP3-206ENST00000494572 CNPY2Q9Y2B0 182 aa13□□□□□ -0.33
KRTCAP3-206ENST00000494572 FOCADQ5VW36 1801 aa12.99□□□□□ -0.33
KRTCAP3-206ENST00000494572 DDX60LQ5H9U9 1706 aaKnown RBP12.99□□□□□ -0.33
KRTCAP3-206ENST00000494572 hCG_1642624A0A1W2PR95 340 aa12.99□□□□□ -0.33
KRTCAP3-206ENST00000494572 KLRF2D3W0D1 207 aa12.99□□□□□ -0.33
KRTCAP3-206ENST00000494572 KIF3CO14782 793 aa12.99□□□□□ -0.33
KRTCAP3-206ENST00000494572 TBC1D12O60347 775 aa12.99□□□□□ -0.33
KRTCAP3-206ENST00000494572 DDNO94850 711 aaPredicted RBP12.99□□□□□ -0.33
KRTCAP3-206ENST00000494572 GH2P01242 217 aa12.99□□□□□ -0.33
KRTCAP3-206ENST00000494572 EPS15P42566 896 aa12.99□□□□□ -0.33
KRTCAP3-206ENST00000494572 SEPT2Q15019 361 aa12.99□□□□□ -0.33
KRTCAP3-206ENST00000494572 DPY19L2Q6NUT2 758 aa12.99□□□□□ -0.33
KRTCAP3-206ENST00000494572 FAM173BQ6P4H8 233 aa12.99□□□□□ -0.33
KRTCAP3-206ENST00000494572 MIGA2Q7L4E1 593 aa12.99□□□□□ -0.33
KRTCAP3-206ENST00000494572 USP48Q86UV5 1035 aa12.99□□□□□ -0.33
KRTCAP3-206ENST00000494572 LRRC47Q8N1G4 583 aaKnown RBP12.99□□□□□ -0.33
KRTCAP3-206ENST00000494572 STAG2Q8N3U4 1231 aa12.99□□□□□ -0.33
KRTCAP3-206ENST00000494572 ZNF396Q96N95 335 aaPredicted RBP12.99□□□□□ -0.33
KRTCAP3-206ENST00000494572 GDPD2Q9HCC8 539 aa12.99□□□□□ -0.33
KRTCAP3-206ENST00000494572 GJB4Q9NTQ9 266 aa12.99□□□□□ -0.33
KRTCAP3-206ENST00000494572 NYAP2Q9P242 653 aa12.99□□□□□ -0.33
KRTCAP3-206ENST00000494572 RBM27Q9P2N5 1060 aaKnown RBP12.99□□□□□ -0.33
KRTCAP3-206ENST00000494572 TFIP11Q9UBB9 837 aaKnown RBP12.99□□□□□ -0.33
KRTCAP3-206ENST00000494572 SCAF8Q9UPN6 1271 aaKnown RBP12.99□□□□□ -0.33
KRTCAP3-206ENST00000494572 PALM3A6NDB9 673 aaPredicted RBP12.98□□□□□ -0.33
KRTCAP3-206ENST00000494572 USP17L5A8MUK1 530 aa12.98□□□□□ -0.33
KRTCAP3-206ENST00000494572 UBE2Q2LH0YL09 131 aa12.98□□□□□ -0.33
KRTCAP3-206ENST00000494572 FIBPO43427 364 aa12.98□□□□□ -0.33
KRTCAP3-206ENST00000494572 RAD21O60216 631 aa12.98□□□□□ -0.33
KRTCAP3-206ENST00000494572 GOLGA8HP0CJ92 632 aa12.98□□□□□ -0.33
KRTCAP3-206ENST00000494572 EEF2P13639 858 aaKnown RBP12.98□□□□□ -0.33
KRTCAP3-206ENST00000494572 FUT2Q10981 343 aa12.98□□□□□ -0.33
KRTCAP3-206ENST00000494572 USP17L2Q6R6M4 530 aa12.98□□□□□ -0.33
KRTCAP3-206ENST00000494572 CLEC10AQ8IUN9 316 aa12.98□□□□□ -0.33
KRTCAP3-206ENST00000494572 APOBEC3FQ8IUX4 373 aaKnown RBP12.98□□□□□ -0.33
KRTCAP3-206ENST00000494572 TNS4Q8IZW8 715 aa12.98□□□□□ -0.33
KRTCAP3-206ENST00000494572 MKL1Q969V6 931 aa12.98□□□□□ -0.33
KRTCAP3-206ENST00000494572 CFAP45Q9UL16 551 aa12.98□□□□□ -0.33
KRTCAP3-206ENST00000494572 ISY1Q9ULR0 285 aaKnown RBP12.98□□□□□ -0.33
KRTCAP3-206ENST00000494572 ECM29Q5VYK3 1845 aa12.97□□□□□ -0.33
KRTCAP3-206ENST00000494572 ASTN2O75129 1339 aaPredicted RBP12.97□□□□□ -0.33
KRTCAP3-206ENST00000494572 CNTNAP5Q8WYK1 1306 aa12.97□□□□□ -0.33
KRTCAP3-206ENST00000494572 SLC34A2O95436 690 aa12.97□□□□□ -0.33
KRTCAP3-206ENST00000494572 KIF23Q02241 960 aaPredicted RBP12.97□□□□□ -0.33
KRTCAP3-206ENST00000494572 ICA1Q05084 483 aa12.97□□□□□ -0.33
KRTCAP3-206ENST00000494572 PKN1Q16512 942 aa12.97□□□□□ -0.33
KRTCAP3-206ENST00000494572 CCDC96Q2M329 555 aa12.97□□□□□ -0.33
KRTCAP3-206ENST00000494572 ASPRV1Q53RT3 343 aa12.97□□□□□ -0.33
KRTCAP3-206ENST00000494572 ANGEL2Q5VTE6 544 aaKnown RBP12.97□□□□□ -0.33
KRTCAP3-206ENST00000494572 ATL3Q6DD88 541 aa12.97□□□□□ -0.33
KRTCAP3-206ENST00000494572 BRAPQ7Z569 592 aa12.97□□□□□ -0.33
KRTCAP3-206ENST00000494572 TRPM4Q8TD43 1214 aa12.97□□□□□ -0.33
KRTCAP3-206ENST00000494572 SCAND2PQ9GZW5 306 aaPredicted RBP12.97□□□□□ -0.33
KRTCAP3-206ENST00000494572 DEFB129Q9H1M3 183 aa12.97□□□□□ -0.33
KRTCAP3-206ENST00000494572 VAT1LQ9HCJ6 419 aa12.97□□□□□ -0.33
KRTCAP3-206ENST00000494572 GPCPD1Q9NPB8 672 aa12.97□□□□□ -0.33
KRTCAP3-206ENST00000494572 DDX49Q9Y6V7 483 aaKnown RBP12.97□□□□□ -0.33
KRTCAP3-206ENST00000494572 FRMPD2Q68DX3 1309 aaPredicted RBP12.96□□□□□ -0.33
KRTCAP3-206ENST00000494572 MMP1P03956 469 aa12.96□□□□□ -0.33
KRTCAP3-206ENST00000494572 PDHBP11177 359 aa12.96□□□□□ -0.33
KRTCAP3-206ENST00000494572 SCG2P13521 617 aa12.96□□□□□ -0.33
KRTCAP3-206ENST00000494572 SMARCA1P28370 1054 aa12.96□□□□□ -0.33
KRTCAP3-206ENST00000494572 RRP1BQ14684 758 aaKnown RBP12.96□□□□□ -0.33
KRTCAP3-206ENST00000494572 PFKFB3Q16875 520 aaPredicted RBP12.96□□□□□ -0.33
KRTCAP3-206ENST00000494572 SHROOM1Q2M3G4 852 aaPredicted RBP12.96□□□□□ -0.33
KRTCAP3-206ENST00000494572 CDAN1Q8IWY9 1227 aa12.96□□□□□ -0.33
KRTCAP3-206ENST00000494572 HOOK2Q96ED9 719 aa12.96□□□□□ -0.33
KRTCAP3-206ENST00000494572 RRP36Q96EU6 259 aaKnown RBP12.96□□□□□ -0.33
KRTCAP3-206ENST00000494572 UBA5Q9GZZ9 404 aa12.96□□□□□ -0.33
KRTCAP3-206ENST00000494572 ARHGEF10LQ9HCE6 1279 aa12.96□□□□□ -0.33
KRTCAP3-206ENST00000494572 VPS54Q9P1Q0 977 aa12.96□□□□□ -0.33
KRTCAP3-206ENST00000494572 PGAP2Q9UHJ9 254 aa12.96□□□□□ -0.33
KRTCAP3-206ENST00000494572 KCNJ14Q9UNX9 436 aa12.96□□□□□ -0.33
KRTCAP3-206ENST00000494572 GOLGA6L4A6NEF3 574 aa12.95□□□□□ -0.34
KRTCAP3-206ENST00000494572 NLRP5P59047 1200 aa12.95□□□□□ -0.34
KRTCAP3-206ENST00000494572 JAG1P78504 1218 aa12.95□□□□□ -0.34
KRTCAP3-206ENST00000494572 MAP3K10Q02779 954 aa12.95□□□□□ -0.34
KRTCAP3-206ENST00000494572 CEBPZQ03701 1054 aaKnown RBP12.95□□□□□ -0.34
KRTCAP3-206ENST00000494572 TPRNQ4KMQ1 711 aa12.95□□□□□ -0.34
KRTCAP3-206ENST00000494572 GPATCH4Q5T3I0 446 aaKnown RBP12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms