RNA–Protein interactions for RNA: ENST00000494458.1

MSH5-217, Transcript of mutS homolog 5, humanhuman

TSL 2

Gene MSH5, Length 520 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-217ENST00000494458 LEO1Q8WVC0 666 aaPredicted RBP7.89□□□□□ -1.15
MSH5-217ENST00000494458 FAM151AQ8WW52 585 aa7.89□□□□□ -1.15
MSH5-217ENST00000494458 PHKBQ93100 1093 aa7.89□□□□□ -1.15
MSH5-217ENST00000494458 C8orf76Q96K31 380 aa7.89□□□□□ -1.15
MSH5-217ENST00000494458 AIFM3Q96NN9 605 aa7.89□□□□□ -1.15
MSH5-217ENST00000494458 LZTS2Q9BRK4 669 aa7.89□□□□□ -1.15
MSH5-217ENST00000494458 ALG1Q9BT22 464 aa7.89□□□□□ -1.15
MSH5-217ENST00000494458 FOXP1Q9H334 677 aaPredicted RBP7.89□□□□□ -1.15
MSH5-217ENST00000494458 SPON1Q9HCB6 807 aa7.89□□□□□ -1.15
MSH5-217ENST00000494458 POLR3EQ9NVU0 708 aa7.89□□□□□ -1.15
MSH5-217ENST00000494458 RBM27Q9P2N5 1060 aaKnown RBP7.89□□□□□ -1.15
MSH5-217ENST00000494458 CFAP45Q9UL16 551 aa7.89□□□□□ -1.15
MSH5-217ENST00000494458 ISY1Q9ULR0 285 aaKnown RBP7.89□□□□□ -1.15
MSH5-217ENST00000494458 CNTNAP1P78357 1384 aa7.88□□□□□ -1.15
MSH5-217ENST00000494458 CNTNAP5Q8WYK1 1306 aa7.88□□□□□ -1.15
MSH5-217ENST00000494458 KIF28PB7ZC32 967 aa7.88□□□□□ -1.15
MSH5-217ENST00000494458 GADD45BO75293 160 aaPredicted RBP7.88□□□□□ -1.15
MSH5-217ENST00000494458 RAD17O75943 681 aa7.88□□□□□ -1.15
MSH5-217ENST00000494458 MMP1P03956 469 aa7.88□□□□□ -1.15
MSH5-217ENST00000494458 TSPY3P0CV98 308 aa7.88□□□□□ -1.15
MSH5-217ENST00000494458 TSPY8P0CW00 308 aa7.88□□□□□ -1.15
MSH5-217ENST00000494458 KIF5BP33176 963 aa7.88□□□□□ -1.15
MSH5-217ENST00000494458 FOXD4L5Q5VV16 416 aaPredicted RBP7.88□□□□□ -1.15
MSH5-217ENST00000494458 MYSM1Q5VVJ2 828 aa7.88□□□□□ -1.15
MSH5-217ENST00000494458 CIAPIN1Q6FI81 312 aa7.88□□□□□ -1.15
MSH5-217ENST00000494458 FAM173BQ6P4H8 233 aa7.88□□□□□ -1.15
MSH5-217ENST00000494458 FERMT3Q86UX7 667 aa7.88□□□□□ -1.15
MSH5-217ENST00000494458 TRIM22Q8IYM9 498 aa7.88□□□□□ -1.15
MSH5-217ENST00000494458 STK11IPQ8N1F8 1099 aa7.88□□□□□ -1.15
MSH5-217ENST00000494458 NLGN2Q8NFZ4 835 aa7.88□□□□□ -1.15
MSH5-217ENST00000494458 FOXD4L4Q8WXT5 416 aaPredicted RBP7.88□□□□□ -1.15
MSH5-217ENST00000494458 JDP2Q8WYK2 163 aa7.88□□□□□ -1.15
MSH5-217ENST00000494458 TNFRSF25Q93038 417 aa7.88□□□□□ -1.15
MSH5-217ENST00000494458 CEP95Q96GE4 821 aa7.88□□□□□ -1.15
MSH5-217ENST00000494458 PHF20Q9BVI0 1012 aa7.88□□□□□ -1.15
MSH5-217ENST00000494458 SPZ1Q9BXG8 430 aa7.88□□□□□ -1.15
MSH5-217ENST00000494458 RIOX1Q9H6W3 641 aa7.88□□□□□ -1.15
MSH5-217ENST00000494458 SH3GLB2Q9NR46 395 aa7.88□□□□□ -1.15
MSH5-217ENST00000494458 EIF4ENIF1Q9NRA8 985 aaKnown RBP7.88□□□□□ -1.15
MSH5-217ENST00000494458 NYAP2Q9P242 653 aa7.88□□□□□ -1.15
MSH5-217ENST00000494458 ZNF70Q9UC06 446 aaPredicted RBP7.88□□□□□ -1.15
MSH5-217ENST00000494458 HERC5Q9UII4 1024 aaKnown RBP7.88□□□□□ -1.15
MSH5-217ENST00000494458 HDAC9Q9UKV0 1011 aa7.88□□□□□ -1.15
MSH5-217ENST00000494458 DDX49Q9Y6V7 483 aaKnown RBP7.88□□□□□ -1.15
MSH5-217ENST00000494458 ADAMTSL1Q8N6G6 1762 aa7.88□□□□□ -1.15
MSH5-217ENST00000494458 FAM237AA0A1B0GTK4 181 aa7.87□□□□□ -1.15
MSH5-217ENST00000494458 PSDA5PKW4 1024 aaPredicted RBP7.87□□□□□ -1.15
MSH5-217ENST00000494458 UBE2Q2LH0YL09 131 aa7.87□□□□□ -1.15
MSH5-217ENST00000494458 M0R2N6 131 aa7.87□□□□□ -1.15
MSH5-217ENST00000494458 WNT10BO00744 389 aa7.87□□□□□ -1.15
MSH5-217ENST00000494458 CYTH3O43739 400 aa7.87□□□□□ -1.15
MSH5-217ENST00000494458 PLEKHA8P1O95397 391 aa7.87□□□□□ -1.15
MSH5-217ENST00000494458 YEATS4O95619 227 aa7.87□□□□□ -1.15
MSH5-217ENST00000494458 HLA-DOAP06340 250 aa7.87□□□□□ -1.15
MSH5-217ENST00000494458 AKR1B1P15121 316 aa7.87□□□□□ -1.15
MSH5-217ENST00000494458 PICALMQ13492 652 aa7.87□□□□□ -1.15
MSH5-217ENST00000494458 DLGAP5Q15398 846 aa7.87□□□□□ -1.15
MSH5-217ENST00000494458 PFKFB3Q16875 520 aaPredicted RBP7.87□□□□□ -1.15
MSH5-217ENST00000494458 OTUD7BQ6GQQ9 843 aa7.87□□□□□ -1.15
MSH5-217ENST00000494458 RAB11FIP4Q86YS3 637 aa7.87□□□□□ -1.15
MSH5-217ENST00000494458 CCDC144CPQ8IYA2 1237 aa7.87□□□□□ -1.15
MSH5-217ENST00000494458 OGFOD1Q8N543 542 aa7.87□□□□□ -1.15
MSH5-217ENST00000494458 LINC00301Q8NCQ3 95 aa7.87□□□□□ -1.15
MSH5-217ENST00000494458 CTCFLQ8NI51 663 aaPredicted RBP7.87□□□□□ -1.15
MSH5-217ENST00000494458 NUP133Q8WUM0 1156 aa7.87□□□□□ -1.15
MSH5-217ENST00000494458 FBXW7Q969H0 707 aa7.87□□□□□ -1.15
MSH5-217ENST00000494458 MTMR8Q96EF0 704 aa7.87□□□□□ -1.15
MSH5-217ENST00000494458 PGBD1Q96JS3 809 aa7.87□□□□□ -1.15
MSH5-217ENST00000494458 USP28Q96RU2 1077 aa7.87□□□□□ -1.15
MSH5-217ENST00000494458 TMEM121BQ9BXQ6 578 aaPredicted RBP7.87□□□□□ -1.15
MSH5-217ENST00000494458 SLC26A6Q9BXS9 759 aa7.87□□□□□ -1.15
MSH5-217ENST00000494458 TDRD3Q9H7E2 651 aaKnown RBP7.87□□□□□ -1.15
MSH5-217ENST00000494458 KAT14Q9H8E8 782 aa7.87□□□□□ -1.15
MSH5-217ENST00000494458 GDPD2Q9HCC8 539 aa7.87□□□□□ -1.15
MSH5-217ENST00000494458 GJB4Q9NTQ9 266 aa7.87□□□□□ -1.15
MSH5-217ENST00000494458 TMEM63CQ9P1W3 806 aa7.87□□□□□ -1.15
MSH5-217ENST00000494458 NAP1L2Q9ULW6 460 aaPredicted RBP7.87□□□□□ -1.15
MSH5-217ENST00000494458 V9GY48 417 aaPredicted RBP7.87□□□□□ -1.15
MSH5-217ENST00000494458 TCHHQ07283 1943 aa7.87□□□□□ -1.15
MSH5-217ENST00000494458 A0A1W2PQ27 194 aa7.86□□□□□ -1.15
MSH5-217ENST00000494458 A0A1W2PQ64 194 aa7.86□□□□□ -1.15
MSH5-217ENST00000494458 A0A1W2PQD8 194 aa7.86□□□□□ -1.15
MSH5-217ENST00000494458 TTLL1O95922 423 aa7.86□□□□□ -1.15
MSH5-217ENST00000494458 PDHBP11177 359 aa7.86□□□□□ -1.15
MSH5-217ENST00000494458 VEGFAP15692 232 aaPredicted RBP7.86□□□□□ -1.15
MSH5-217ENST00000494458 SLC39A14Q15043 492 aa7.86□□□□□ -1.15
MSH5-217ENST00000494458 PTPAQ15257 358 aa7.86□□□□□ -1.15
MSH5-217ENST00000494458 RBM43Q6ZSC3 357 aaKnown RBP7.86□□□□□ -1.15
MSH5-217ENST00000494458 NOSTRINQ8IVI9 506 aa7.86□□□□□ -1.15
MSH5-217ENST00000494458 STAG2Q8N3U4 1231 aa7.86□□□□□ -1.15
MSH5-217ENST00000494458 DAGLBQ8NCG7 672 aa7.86□□□□□ -1.15
MSH5-217ENST00000494458 ZNF396Q96N95 335 aaPredicted RBP7.86□□□□□ -1.15
MSH5-217ENST00000494458 KANSL2Q9H9L4 492 aa7.86□□□□□ -1.15
MSH5-217ENST00000494458 TFIP11Q9UBB9 837 aaKnown RBP7.86□□□□□ -1.15
MSH5-217ENST00000494458 BCS1LQ9Y276 419 aa7.86□□□□□ -1.15
MSH5-217ENST00000494458 BTBD18B2RXH4 712 aa7.85□□□□□ -1.15
MSH5-217ENST00000494458 PPFIA3O75145 1194 aa7.85□□□□□ -1.15
MSH5-217ENST00000494458 PPP6R2O75170 966 aa7.85□□□□□ -1.15
MSH5-217ENST00000494458 SCG2P13521 617 aa7.85□□□□□ -1.15
MSH5-217ENST00000494458 TOB1P50616 345 aaPredicted RBP7.85□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms