RNA–Protein interactions for RNA: ENST00000494327.1

HPS3-207, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 3

Gene HPS3, Length 556 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-207ENST00000494327 CTDSPL2Q05D32 466 aa26.07■■□□□ 1.76
HPS3-207ENST00000494327 Q3C1V9 767 aa26.07■■□□□ 1.76
HPS3-207ENST00000494327 CWC27Q6UX04 472 aaKnown RBP26.07■■□□□ 1.76
HPS3-207ENST00000494327 VCPKMTQ9H867 229 aa26.07■■□□□ 1.76
HPS3-207ENST00000494327 RGS19P49795 217 aa26.06■■□□□ 1.76
HPS3-207ENST00000494327 POTEEQ6S8J3 1075 aa26.06■■□□□ 1.76
HPS3-207ENST00000494327 CCAR1Q8IX12 1150 aaKnown RBP26.06■■□□□ 1.76
HPS3-207ENST00000494327 ZNF333Q96JL9 665 aa26.06■■□□□ 1.76
HPS3-207ENST00000494327 BIN2Q9UBW5 565 aaPredicted RBP26.06■■□□□ 1.76
HPS3-207ENST00000494327 CCDC171Q6TFL3 1326 aa26.06■■□□□ 1.76
HPS3-207ENST00000494327 HSPD1P10809 573 aaKnown RBP26.05■■□□□ 1.76
HPS3-207ENST00000494327 GRK4P32298 578 aa26.05■■□□□ 1.76
HPS3-207ENST00000494327 ERVK-9P63128 1117 aa26.05■■□□□ 1.76
HPS3-207ENST00000494327 ERVK-24P63145 666 aa26.05■■□□□ 1.76
HPS3-207ENST00000494327 FAM47AQ5JRC9 791 aa26.05■■□□□ 1.76
HPS3-207ENST00000494327 TTC22Q5TAA0 569 aa26.05■■□□□ 1.76
HPS3-207ENST00000494327 SAMD1Q6SPF0 538 aaPredicted RBP26.05■■□□□ 1.76
HPS3-207ENST00000494327 LPAR1Q92633 364 aa26.05■■□□□ 1.76
HPS3-207ENST00000494327 INCENPQ9NQS7 918 aa26.05■■□□□ 1.76
HPS3-207ENST00000494327 FGAP02671 866 aa26.04■■□□□ 1.76
HPS3-207ENST00000494327 TSPY3P0CV98 308 aa26.04■■□□□ 1.76
HPS3-207ENST00000494327 TSPY8P0CW00 308 aa26.04■■□□□ 1.76
HPS3-207ENST00000494327 MFAP1P55081 439 aaKnown RBP26.04■■□□□ 1.76
HPS3-207ENST00000494327 MLLT1Q03111 559 aaPredicted RBP26.04■■□□□ 1.76
HPS3-207ENST00000494327 COG2Q14746 738 aa26.04■■□□□ 1.76
HPS3-207ENST00000494327 ALX1Q15699 326 aa26.04■■□□□ 1.76
HPS3-207ENST00000494327 GOPCQ9HD26 462 aa26.04■■□□□ 1.76
HPS3-207ENST00000494327 CLIP2Q9UDT6 1046 aa26.04■■□□□ 1.76
HPS3-207ENST00000494327 RABGAP1Q9Y3P9 1069 aa26.04■■□□□ 1.76
HPS3-207ENST00000494327 SPDYE16A6NNV3 312 aaPredicted RBP26.03■■□□□ 1.76
HPS3-207ENST00000494327 HIP1O00291 1037 aa26.03■■□□□ 1.76
HPS3-207ENST00000494327 GSPT1P15170 499 aaKnown RBP26.03■■□□□ 1.76
HPS3-207ENST00000494327 TFAP4Q01664 338 aa26.03■■□□□ 1.76
HPS3-207ENST00000494327 TMEM106CQ9BVX2 250 aa26.03■■□□□ 1.76
HPS3-207ENST00000494327 HOXC10Q9NYD6 342 aa26.03■■□□□ 1.76
HPS3-207ENST00000494327 NYAP2Q9P242 653 aa26.03■■□□□ 1.76
HPS3-207ENST00000494327 ADCY3O60266 1144 aa26.02■■□□□ 1.76
HPS3-207ENST00000494327 CNMDO75829 334 aa26.02■■□□□ 1.76
HPS3-207ENST00000494327 PORCNQ9H237 461 aa26.02■■□□□ 1.76
HPS3-207ENST00000494327 CWC22Q9HCG8 908 aaKnown RBP26.02■■□□□ 1.76
HPS3-207ENST00000494327 POTEFA5A3E0 1075 aa26.01■■□□□ 1.75
HPS3-207ENST00000494327 WDR46O15213 610 aaKnown RBP26.01■■□□□ 1.75
HPS3-207ENST00000494327 MGAMO43451 1857 aa26.01■■□□□ 1.75
HPS3-207ENST00000494327 FLOT1O75955 427 aa26.01■■□□□ 1.75
HPS3-207ENST00000494327 ELNP15502 786 aa26.01■■□□□ 1.75
HPS3-207ENST00000494327 NEDD1Q8NHV4 660 aa26.01■■□□□ 1.75
HPS3-207ENST00000494327 CEP95Q96GE4 821 aa26.01■■□□□ 1.75
HPS3-207ENST00000494327 TOMM22Q9NS69 142 aa26.01■■□□□ 1.75
HPS3-207ENST00000494327 BTBD7Q9P203 1132 aa26.01■■□□□ 1.75
HPS3-207ENST00000494327 IGKV6D-41A0A0C4DH26 115 aa26■■□□□ 1.75
HPS3-207ENST00000494327 CENPBP07199 599 aaPredicted RBP26■■□□□ 1.75
HPS3-207ENST00000494327 MAPK4P31152 587 aa26■■□□□ 1.75
HPS3-207ENST00000494327 CCNA1P78396 465 aa26■■□□□ 1.75
HPS3-207ENST00000494327 WDR78Q5VTH9 848 aa26■■□□□ 1.75
HPS3-207ENST00000494327 LBX2Q6XYB7 198 aa26■■□□□ 1.75
HPS3-207ENST00000494327 SLAIN1Q8ND83 568 aa26■■□□□ 1.75
HPS3-207ENST00000494327 MTMR4Q9NYA4 1195 aa26■■□□□ 1.75
HPS3-207ENST00000494327 ANAPC4Q9UJX5 808 aa26■■□□□ 1.75
HPS3-207ENST00000494327 DDX52Q9Y2R4 599 aaKnown RBP eCLIP26■■□□□ 1.75
HPS3-207ENST00000494327 TACC3Q9Y6A5 838 aa26■■□□□ 1.75
HPS3-207ENST00000494327 TSPY2A6NKD2 308 aa25.99■■□□□ 1.75
HPS3-207ENST00000494327 DSG3P32926 999 aa25.99■■□□□ 1.75
HPS3-207ENST00000494327 HAND2P61296 217 aa25.99■■□□□ 1.75
HPS3-207ENST00000494327 IRF5Q13568 498 aa25.99■■□□□ 1.75
HPS3-207ENST00000494327 MTFR1Q15390 333 aa25.99■■□□□ 1.75
HPS3-207ENST00000494327 FAM83BQ5T0W9 1011 aa25.99■■□□□ 1.75
HPS3-207ENST00000494327 GJD2Q9UKL4 321 aa25.99■■□□□ 1.75
HPS3-207ENST00000494327 HTTP42858 3142 aa25.99■■□□□ 1.75
HPS3-207ENST00000494327 F5H6K3 240 aa25.98■■□□□ 1.75
HPS3-207ENST00000494327 RANBP6O60518 1105 aaKnown RBP25.98■■□□□ 1.75
HPS3-207ENST00000494327 TTLL1O95922 423 aa25.98■■□□□ 1.75
HPS3-207ENST00000494327 UBXN2AP68543 259 aa25.98■■□□□ 1.75
HPS3-207ENST00000494327 KLRC3Q07444 240 aa25.98■■□□□ 1.75
HPS3-207ENST00000494327 RRP12Q5JTH9 1297 aaKnown RBP25.98■■□□□ 1.75
HPS3-207ENST00000494327 GPR142Q7Z601 462 aa25.98■■□□□ 1.75
HPS3-207ENST00000494327 ATG4CQ96DT6 458 aa25.98■■□□□ 1.75
HPS3-207ENST00000494327 CYP2B6P20813 491 aa25.97■■□□□ 1.75
HPS3-207ENST00000494327 PLEKHH3Q7Z736 793 aa25.97■■□□□ 1.75
HPS3-207ENST00000494327 LRRC47Q8N1G4 583 aaKnown RBP25.97■■□□□ 1.75
HPS3-207ENST00000494327 PXYLP1Q8TE99 480 aa25.97■■□□□ 1.75
HPS3-207ENST00000494327 NUP88Q99567 741 aaPredicted RBP25.97■■□□□ 1.75
HPS3-207ENST00000494327 NUDT12Q9BQG2 462 aa25.97■■□□□ 1.75
HPS3-207ENST00000494327 FBXO28Q9NVF7 368 aa25.97■■□□□ 1.75
HPS3-207ENST00000494327 EN2P19622 333 aaPredicted RBP25.96■■□□□ 1.75
HPS3-207ENST00000494327 PLS1Q14651 629 aa25.96■■□□□ 1.75
HPS3-207ENST00000494327 ZMYM6O95789 1325 aa25.95■■□□□ 1.75
HPS3-207ENST00000494327 NDUFB10O96000 172 aa25.95■■□□□ 1.74
HPS3-207ENST00000494327 MKL1Q969V6 931 aa25.95■■□□□ 1.74
HPS3-207ENST00000494327 GREB1LQ9C091 1923 aaPredicted RBP25.94■■□□□ 1.74
HPS3-207ENST00000494327 ORC4O43929 436 aa25.94■■□□□ 1.74
HPS3-207ENST00000494327 NMT2O60551 498 aa25.94■■□□□ 1.74
HPS3-207ENST00000494327 INHAP05111 366 aa25.94■■□□□ 1.74
HPS3-207ENST00000494327 CCL5P13501 91 aa25.94■■□□□ 1.74
HPS3-207ENST00000494327 MB21D1Q8N884 522 aa25.94■■□□□ 1.74
HPS3-207ENST00000494327 SOCS4Q8WXH5 440 aa25.94■■□□□ 1.74
HPS3-207ENST00000494327 CHMP4CQ96CF2 233 aa25.94■■□□□ 1.74
HPS3-207ENST00000494327 STX8Q9UNK0 236 aa25.94■■□□□ 1.74
HPS3-207ENST00000494327 PLIN4Q96Q06 1357 aa25.94■■□□□ 1.74
HPS3-207ENST00000494327 ZNF213O14771 459 aa25.93■■□□□ 1.74
HPS3-207ENST00000494327 CENPQQ7L2Z9 268 aaPredicted RBP25.93■■□□□ 1.74
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms