RNA–Protein interactions for RNA: ENST00000493903.1

GTF3A-208, Transcript of general transcription factor IIIA, humanhuman

TSL 3

Gene GTF3A, Length 748 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-208ENST00000493903 TRIM28Q13263 835 aaKnown RBP5.94□□□□□ -1.46
GTF3A-208ENST00000493903 HLTFQ14527 1009 aaKnown RBP eCLIP5.94□□□□□ -1.46
GTF3A-208ENST00000493903 PLA2G4EQ3MJ16 856 aa5.94□□□□□ -1.46
GTF3A-208ENST00000493903 ZC3H12AQ5D1E8 599 aaKnown RBP5.94□□□□□ -1.46
GTF3A-208ENST00000493903 TRIM61Q5EBN2 209 aa5.94□□□□□ -1.46
GTF3A-208ENST00000493903 PRRT3Q5FWE3 981 aa5.94□□□□□ -1.46
GTF3A-208ENST00000493903 DDX46Q7L014 1031 aaKnown RBP5.94□□□□□ -1.46
GTF3A-208ENST00000493903 ALYREFQ86V81 257 aaKnown RBP5.94□□□□□ -1.46
GTF3A-208ENST00000493903 WFDC8Q8IUA0 241 aa5.94□□□□□ -1.46
GTF3A-208ENST00000493903 MCATQ8IVS2 390 aaKnown RBP5.94□□□□□ -1.46
GTF3A-208ENST00000493903 SLC7A3Q8WY07 619 aa5.94□□□□□ -1.46
GTF3A-208ENST00000493903 DDX1Q92499 740 aaKnown RBP5.94□□□□□ -1.46
GTF3A-208ENST00000493903 ACSF2Q96CM8 615 aaPredicted RBP5.94□□□□□ -1.46
GTF3A-208ENST00000493903 CLUHP3Q96NS8 147 aa5.94□□□□□ -1.46
GTF3A-208ENST00000493903 TARS2Q9BW92 718 aaKnown RBP5.94□□□□□ -1.46
GTF3A-208ENST00000493903 SUCOQ9UBS9 1254 aaKnown RBP5.94□□□□□ -1.46
GTF3A-208ENST00000493903 RGS13O14921 159 aa5.93□□□□□ -1.46
GTF3A-208ENST00000493903 RASGRP1O95267 797 aa5.93□□□□□ -1.46
GTF3A-208ENST00000493903 EYA4O95677 639 aa5.93□□□□□ -1.46
GTF3A-208ENST00000493903 SLFN14P0C7P3 912 aa5.93□□□□□ -1.46
GTF3A-208ENST00000493903 SPATA31C1P0DKV0 1188 aa5.93□□□□□ -1.46
GTF3A-208ENST00000493903 POU3F2P20265 443 aaPredicted RBP5.93□□□□□ -1.46
GTF3A-208ENST00000493903 BAG6P46379 1132 aa5.93□□□□□ -1.46
GTF3A-208ENST00000493903 ERVK-24P63145 666 aa5.93□□□□□ -1.46
GTF3A-208ENST00000493903 FAM50AQ14320 339 aaKnown RBP5.93□□□□□ -1.46
GTF3A-208ENST00000493903 PDE3AQ14432 1141 aa5.93□□□□□ -1.46
GTF3A-208ENST00000493903 SLC6A19Q695T7 634 aa5.93□□□□□ -1.46
GTF3A-208ENST00000493903 GPAT2Q6NUI2 795 aa5.93□□□□□ -1.46
GTF3A-208ENST00000493903 ILDR2Q71H61 639 aa5.93□□□□□ -1.46
GTF3A-208ENST00000493903 IL22RA1Q8N6P7 574 aa5.93□□□□□ -1.46
GTF3A-208ENST00000493903 UBR7Q8N806 425 aa5.93□□□□□ -1.46
GTF3A-208ENST00000493903 PMM1Q92871 262 aa5.93□□□□□ -1.46
GTF3A-208ENST00000493903 SUSD2Q9UGT4 822 aa5.93□□□□□ -1.46
GTF3A-208ENST00000493903 PHLDB1Q86UU1 1377 aa5.93□□□□□ -1.46
GTF3A-208ENST00000493903 PRAMEF27A3QJZ7 478 aa5.92□□□□□ -1.46
GTF3A-208ENST00000493903 DCDC2CA8MYV0 355 aa5.92□□□□□ -1.46
GTF3A-208ENST00000493903 FSCN2O14926 492 aa5.92□□□□□ -1.46
GTF3A-208ENST00000493903 FANCGO15287 622 aa5.92□□□□□ -1.46
GTF3A-208ENST00000493903 CAND2O75155 1236 aa5.92□□□□□ -1.46
GTF3A-208ENST00000493903 ECEL1O95672 775 aa5.92□□□□□ -1.46
GTF3A-208ENST00000493903 CAPNS1P04632 268 aa5.92□□□□□ -1.46
GTF3A-208ENST00000493903 CHRNA4P43681 627 aa5.92□□□□□ -1.46
GTF3A-208ENST00000493903 ETF1P62495 437 aaKnown RBP5.92□□□□□ -1.46
GTF3A-208ENST00000493903 PPP2R2AP63151 447 aa5.92□□□□□ -1.46
GTF3A-208ENST00000493903 PPP2R5AQ15172 486 aa5.92□□□□□ -1.46
GTF3A-208ENST00000493903 GRIK4Q16099 956 aa5.92□□□□□ -1.46
GTF3A-208ENST00000493903 RNF219Q5W0B1 726 aaPredicted RBP5.92□□□□□ -1.46
GTF3A-208ENST00000493903 HEATR6Q6AI08 1181 aaKnown RBP5.92□□□□□ -1.46
GTF3A-208ENST00000493903 MRPL41Q8IXM3 137 aaKnown RBP5.92□□□□□ -1.46
GTF3A-208ENST00000493903 RAVER1Q8IY67 606 aaKnown RBP5.92□□□□□ -1.46
GTF3A-208ENST00000493903 KLHL23Q8NBE8 558 aa5.92□□□□□ -1.46
GTF3A-208ENST00000493903 FAM13CQ8NE31 585 aa5.92□□□□□ -1.46
GTF3A-208ENST00000493903 SLC6A18Q96N87 628 aa5.92□□□□□ -1.46
GTF3A-208ENST00000493903 LRP2BPQ9P2M1 347 aa5.92□□□□□ -1.46
GTF3A-208ENST00000493903 E2F8A0AVK6 867 aa5.91□□□□□ -1.46
GTF3A-208ENST00000493903 FAM86C2PA6NEL3 165 aa5.91□□□□□ -1.46
GTF3A-208ENST00000493903 EFCAB14O75071 495 aa5.91□□□□□ -1.46
GTF3A-208ENST00000493903 PABPC1P11940 636 aaKnown RBP5.91□□□□□ -1.46
GTF3A-208ENST00000493903 LIG1P18858 919 aa5.91□□□□□ -1.46
GTF3A-208ENST00000493903 SDSP20132 328 aa5.91□□□□□ -1.46
GTF3A-208ENST00000493903 RAC1P63000 192 aa5.91□□□□□ -1.46
GTF3A-208ENST00000493903 MCL1Q07820 350 aa5.91□□□□□ -1.46
GTF3A-208ENST00000493903 DHCR24Q15392 516 aa5.91□□□□□ -1.46
GTF3A-208ENST00000493903 CNNM4Q6P4Q7 775 aa5.91□□□□□ -1.46
GTF3A-208ENST00000493903 CD163Q86VB7 1156 aa5.91□□□□□ -1.46
GTF3A-208ENST00000493903 PPFIBP1Q86W92 1011 aa5.91□□□□□ -1.46
GTF3A-208ENST00000493903 C12orf40Q86WS4 652 aa5.91□□□□□ -1.46
GTF3A-208ENST00000493903 ZNF227Q86WZ6 799 aa5.91□□□□□ -1.46
GTF3A-208ENST00000493903 HID1Q8IV36 788 aa5.91□□□□□ -1.46
GTF3A-208ENST00000493903 TMEM192Q8IY95 271 aa5.91□□□□□ -1.46
GTF3A-208ENST00000493903 PHACTR4Q8IZ21 702 aa5.91□□□□□ -1.46
GTF3A-208ENST00000493903 FMR1NBQ8N0W7 255 aaPredicted RBP5.91□□□□□ -1.46
GTF3A-208ENST00000493903 TSR2Q969E8 191 aaKnown RBP5.91□□□□□ -1.46
GTF3A-208ENST00000493903 TMEM87BQ96K49 555 aa5.91□□□□□ -1.46
GTF3A-208ENST00000493903 CCDC74BQ96LY2 380 aa5.91□□□□□ -1.46
GTF3A-208ENST00000493903 HAUS7Q99871 368 aa5.91□□□□□ -1.46
GTF3A-208ENST00000493903 ASPSCR1Q9BZE9 553 aa5.91□□□□□ -1.46
GTF3A-208ENST00000493903 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP5.91□□□□□ -1.46
GTF3A-208ENST00000493903 TJP2Q9UDY2 1190 aa5.91□□□□□ -1.46
GTF3A-208ENST00000493903 SFMBT1Q9UHJ3 866 aa5.91□□□□□ -1.46
GTF3A-208ENST00000493903 HIF3AQ9Y2N7 669 aa5.91□□□□□ -1.46
GTF3A-208ENST00000493903 PCDHGC5Q9Y5F6 944 aa5.91□□□□□ -1.46
GTF3A-208ENST00000493903 C1QTNF9BB2RNN3 333 aa5.9□□□□□ -1.46
GTF3A-208ENST00000493903 LINC01387J3KSC0 135 aa5.9□□□□□ -1.46
GTF3A-208ENST00000493903 BRINP1O60477 761 aa5.9□□□□□ -1.46
GTF3A-208ENST00000493903 DEAF1O75398 565 aaPredicted RBP5.9□□□□□ -1.46
GTF3A-208ENST00000493903 ITGAVP06756 1048 aa5.9□□□□□ -1.46
GTF3A-208ENST00000493903 EPHX1P07099 455 aa5.9□□□□□ -1.46
GTF3A-208ENST00000493903 CTSBP07858 339 aa5.9□□□□□ -1.46
GTF3A-208ENST00000493903 ELNP15502 786 aa5.9□□□□□ -1.46
GTF3A-208ENST00000493903 CDC25BP30305 580 aa5.9□□□□□ -1.46
GTF3A-208ENST00000493903 POLR2BP30876 1174 aaKnown RBP5.9□□□□□ -1.46
GTF3A-208ENST00000493903 GNALP38405 381 aa5.9□□□□□ -1.46
GTF3A-208ENST00000493903 RHBDL3P58872 404 aa5.9□□□□□ -1.46
GTF3A-208ENST00000493903 GABREP78334 506 aa5.9□□□□□ -1.46
GTF3A-208ENST00000493903 BIRC2Q13490 618 aa5.9□□□□□ -1.46
GTF3A-208ENST00000493903 SUZ12Q15022 739 aaKnown RBP5.9□□□□□ -1.46
GTF3A-208ENST00000493903 ANKRD39Q53RE8 183 aa5.9□□□□□ -1.46
GTF3A-208ENST00000493903 ZBTB37Q5TC79 503 aa5.9□□□□□ -1.46
GTF3A-208ENST00000493903 YOD1Q5VVQ6 348 aaPredicted RBP5.9□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms