RNA–Protein interactions for RNA: ENST00000493648.1

TOP3A-207, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 2

Gene TOP3A, Length 503 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-207ENST00000493648 GOPCQ9HD26 462 aa8.3□□□□□ -1.08
TOP3A-207ENST00000493648 HOXC10Q9NYD6 342 aa8.3□□□□□ -1.08
TOP3A-207ENST00000493648 SRRDQ9UH36 339 aa8.3□□□□□ -1.08
TOP3A-207ENST00000493648 CCDC171Q6TFL3 1326 aa8.29□□□□□ -1.08
TOP3A-207ENST00000493648 TNPO2O14787 897 aaKnown RBP8.29□□□□□ -1.08
TOP3A-207ENST00000493648 PRDM1O75626 825 aa8.29□□□□□ -1.08
TOP3A-207ENST00000493648 FGAP02671 866 aa8.29□□□□□ -1.08
TOP3A-207ENST00000493648 NEFLP07196 543 aa8.29□□□□□ -1.08
TOP3A-207ENST00000493648 TSPY3P0CV98 308 aa8.29□□□□□ -1.08
TOP3A-207ENST00000493648 TSPY8P0CW00 308 aa8.29□□□□□ -1.08
TOP3A-207ENST00000493648 CTGFP29279 349 aa8.29□□□□□ -1.08
TOP3A-207ENST00000493648 CAP1Q01518 475 aa8.29□□□□□ -1.08
TOP3A-207ENST00000493648 CTDSPL2Q05D32 466 aa8.29□□□□□ -1.08
TOP3A-207ENST00000493648 SLC9C1Q4G0N8 1177 aa8.29□□□□□ -1.08
TOP3A-207ENST00000493648 PPP4R3BQ5MIZ7 849 aa8.29□□□□□ -1.08
TOP3A-207ENST00000493648 VPS53Q5VIR6 699 aa8.29□□□□□ -1.08
TOP3A-207ENST00000493648 CENPQQ7L2Z9 268 aaPredicted RBP8.29□□□□□ -1.08
TOP3A-207ENST00000493648 VCPKMTQ9H867 229 aa8.29□□□□□ -1.08
TOP3A-207ENST00000493648 NYAP2Q9P242 653 aa8.29□□□□□ -1.08
TOP3A-207ENST00000493648 RBPJLQ9UBG7 517 aa8.29□□□□□ -1.08
TOP3A-207ENST00000493648 MORF4L1Q9UBU8 362 aa8.29□□□□□ -1.08
TOP3A-207ENST00000493648 ANAPC4Q9UJX5 808 aa8.29□□□□□ -1.08
TOP3A-207ENST00000493648 RABGAP1Q9Y3P9 1069 aa8.29□□□□□ -1.08
TOP3A-207ENST00000493648 PTCH2Q9Y6C5 1203 aa8.29□□□□□ -1.08
TOP3A-207ENST00000493648 ROBO3Q96MS0 1386 aa8.29□□□□□ -1.08
TOP3A-207ENST00000493648 MYPNQ86TC9 1320 aa8.29□□□□□ -1.08
TOP3A-207ENST00000493648 MGAMO43451 1857 aa8.28□□□□□ -1.08
TOP3A-207ENST00000493648 FOXP2O15409 715 aa8.28□□□□□ -1.08
TOP3A-207ENST00000493648 RAD21O60216 631 aa8.28□□□□□ -1.08
TOP3A-207ENST00000493648 CCNA1P78396 465 aa8.28□□□□□ -1.08
TOP3A-207ENST00000493648 TFAP4Q01664 338 aa8.28□□□□□ -1.08
TOP3A-207ENST00000493648 ZNF589Q86UQ0 364 aaPredicted RBP8.28□□□□□ -1.08
TOP3A-207ENST00000493648 SPICE1Q8N0Z3 855 aa8.28□□□□□ -1.08
TOP3A-207ENST00000493648 NEDD1Q8NHV4 660 aa8.28□□□□□ -1.08
TOP3A-207ENST00000493648 RUFY2Q8WXA3 655 aa8.28□□□□□ -1.08
TOP3A-207ENST00000493648 MKL1Q969V6 931 aa8.28□□□□□ -1.08
TOP3A-207ENST00000493648 ARMC5Q96C12 935 aa8.28□□□□□ -1.08
TOP3A-207ENST00000493648 PAGR1Q9BTK6 254 aa8.28□□□□□ -1.08
TOP3A-207ENST00000493648 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.28□□□□□ -1.08
TOP3A-207ENST00000493648 TANGO6Q9C0B7 1094 aa8.28□□□□□ -1.08
TOP3A-207ENST00000493648 CWC22Q9HCG8 908 aaKnown RBP8.28□□□□□ -1.08
TOP3A-207ENST00000493648 CLIP2Q9UDT6 1046 aa8.28□□□□□ -1.08
TOP3A-207ENST00000493648 ZMYM6O95789 1325 aa8.28□□□□□ -1.08
TOP3A-207ENST00000493648 IGKV6D-41A0A0C4DH26 115 aa8.27□□□□□ -1.09
TOP3A-207ENST00000493648 TSPY2A6NKD2 308 aa8.27□□□□□ -1.09
TOP3A-207ENST00000493648 F5H6K3 240 aa8.27□□□□□ -1.09
TOP3A-207ENST00000493648 ZNF213O14771 459 aa8.27□□□□□ -1.09
TOP3A-207ENST00000493648 WDR46O15213 610 aaKnown RBP8.27□□□□□ -1.09
TOP3A-207ENST00000493648 FLOT1O75955 427 aa8.27□□□□□ -1.09
TOP3A-207ENST00000493648 TTLL1O95922 423 aa8.27□□□□□ -1.09
TOP3A-207ENST00000493648 CENPBP07199 599 aaPredicted RBP8.27□□□□□ -1.09
TOP3A-207ENST00000493648 PCP11498 1178 aaKnown RBP8.27□□□□□ -1.09
TOP3A-207ENST00000493648 GSPT1P15170 499 aaKnown RBP8.27□□□□□ -1.09
TOP3A-207ENST00000493648 MAPK4P31152 587 aa8.27□□□□□ -1.09
TOP3A-207ENST00000493648 GRK4P32298 578 aa8.27□□□□□ -1.09
TOP3A-207ENST00000493648 FLT3LGP49771 235 aa8.27□□□□□ -1.09
TOP3A-207ENST00000493648 SOX10P56693 466 aa8.27□□□□□ -1.09
TOP3A-207ENST00000493648 ERVK-9P63128 1117 aa8.27□□□□□ -1.09
TOP3A-207ENST00000493648 ERVK-24P63145 666 aa8.27□□□□□ -1.09
TOP3A-207ENST00000493648 PRKCZQ05513 592 aa8.27□□□□□ -1.09
TOP3A-207ENST00000493648 KLRC3Q07444 240 aa8.27□□□□□ -1.09
TOP3A-207ENST00000493648 IRF5Q13568 498 aa8.27□□□□□ -1.09
TOP3A-207ENST00000493648 Q3C1V9 767 aa8.27□□□□□ -1.09
TOP3A-207ENST00000493648 FAM47AQ5JRC9 791 aa8.27□□□□□ -1.09
TOP3A-207ENST00000493648 KIAA1755Q5JYT7 1200 aa8.27□□□□□ -1.09
TOP3A-207ENST00000493648 LBX2Q6XYB7 198 aa8.27□□□□□ -1.09
TOP3A-207ENST00000493648 CLEC10AQ8IUN9 316 aa8.27□□□□□ -1.09
TOP3A-207ENST00000493648 CEP95Q96GE4 821 aa8.27□□□□□ -1.09
TOP3A-207ENST00000493648 CCDC136Q96JN2 1154 aa8.27□□□□□ -1.09
TOP3A-207ENST00000493648 DSCC1Q9BVC3 393 aa8.27□□□□□ -1.09
TOP3A-207ENST00000493648 TMEM106CQ9BVX2 250 aa8.27□□□□□ -1.09
TOP3A-207ENST00000493648 RNF41Q9H4P4 317 aaPredicted RBP8.27□□□□□ -1.09
TOP3A-207ENST00000493648 TXNRD2Q9NNW7 524 aa8.27□□□□□ -1.09
TOP3A-207ENST00000493648 TOMM22Q9NS69 142 aa8.27□□□□□ -1.09
TOP3A-207ENST00000493648 MTMR4Q9NYA4 1195 aa8.27□□□□□ -1.09
TOP3A-207ENST00000493648 BIN2Q9UBW5 565 aaPredicted RBP8.27□□□□□ -1.09
TOP3A-207ENST00000493648 CTNNA3Q9UI47 895 aa8.27□□□□□ -1.09
TOP3A-207ENST00000493648 SYNPO2Q9UMS6 1093 aa8.27□□□□□ -1.09
TOP3A-207ENST00000493648 GABRQQ9UN88 632 aa8.27□□□□□ -1.09
TOP3A-207ENST00000493648 SPDYE16A6NNV3 312 aaPredicted RBP8.26□□□□□ -1.09
TOP3A-207ENST00000493648 HAX1O00165 279 aa8.26□□□□□ -1.09
TOP3A-207ENST00000493648 ORC4O43929 436 aa8.26□□□□□ -1.09
TOP3A-207ENST00000493648 ADCY3O60266 1144 aa8.26□□□□□ -1.09
TOP3A-207ENST00000493648 RANBP6O60518 1105 aaKnown RBP8.26□□□□□ -1.09
TOP3A-207ENST00000493648 FGRP09769 529 aa8.26□□□□□ -1.09
TOP3A-207ENST00000493648 RGS19P49795 217 aa8.26□□□□□ -1.09
TOP3A-207ENST00000493648 NT5C2P49902 561 aa8.26□□□□□ -1.09
TOP3A-207ENST00000493648 HAND2P61296 217 aa8.26□□□□□ -1.09
TOP3A-207ENST00000493648 UBXN2AP68543 259 aa8.26□□□□□ -1.09
TOP3A-207ENST00000493648 RRP12Q5JTH9 1297 aaKnown RBP8.26□□□□□ -1.09
TOP3A-207ENST00000493648 MFSD6Q6ZSS7 791 aa8.26□□□□□ -1.09
TOP3A-207ENST00000493648 MB21D1Q8N884 522 aa8.26□□□□□ -1.09
TOP3A-207ENST00000493648 SLAIN1Q8ND83 568 aa8.26□□□□□ -1.09
TOP3A-207ENST00000493648 PXYLP1Q8TE99 480 aa8.26□□□□□ -1.09
TOP3A-207ENST00000493648 SH3TC2Q8TF17 1288 aa8.26□□□□□ -1.09
TOP3A-207ENST00000493648 ZNF333Q96JL9 665 aa8.26□□□□□ -1.09
TOP3A-207ENST00000493648 NUDT12Q9BQG2 462 aa8.26□□□□□ -1.09
TOP3A-207ENST00000493648 INCENPQ9NQS7 918 aa8.26□□□□□ -1.09
TOP3A-207ENST00000493648 DDX52Q9Y2R4 599 aaKnown RBP eCLIP8.26□□□□□ -1.09
TOP3A-207ENST00000493648 ZSWIM8A7E2V4 1837 aa8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms