RNA–Protein interactions for RNA: ENST00000493601.5

PTPRU-208, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 5

Gene PTPRU, Length 695 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-208ENST00000493601 C11orf49Q9H6J7 331 aa20.02■□□□□ 0.8
PTPRU-208ENST00000493601 ARHGEF10LQ9HCE6 1279 aa20.02■□□□□ 0.8
PTPRU-208ENST00000493601 BTBD7Q9P203 1132 aa20.02■□□□□ 0.8
PTPRU-208ENST00000493601 RLFQ13129 1914 aa20.02■□□□□ 0.79
PTPRU-208ENST00000493601 A0A1W2PRG0 241 aa20.01■□□□□ 0.79
PTPRU-208ENST00000493601 DYNLL2Q96FJ2 89 aa20.01■□□□□ 0.79
PTPRU-208ENST00000493601 HOXC10Q9NYD6 342 aa20.01■□□□□ 0.79
PTPRU-208ENST00000493601 SZT2Q5T011 3432 aa20.01■□□□□ 0.79
PTPRU-208ENST00000493601 PARP14Q460N5 1801 aa20■□□□□ 0.79
PTPRU-208ENST00000493601 SMARCA5O60264 1052 aaPredicted RBP20■□□□□ 0.79
PTPRU-208ENST00000493601 PTPREP23469 700 aa20■□□□□ 0.79
PTPRU-208ENST00000493601 MNX1P50219 401 aaPredicted RBP20■□□□□ 0.79
PTPRU-208ENST00000493601 ICA1Q05084 483 aa20■□□□□ 0.79
PTPRU-208ENST00000493601 GRB14Q14449 540 aa20■□□□□ 0.79
PTPRU-208ENST00000493601 COG2Q14746 738 aa20■□□□□ 0.79
PTPRU-208ENST00000493601 C12orf60Q5U649 245 aa20■□□□□ 0.79
PTPRU-208ENST00000493601 MFSD14CQ5VZR4 134 aa20■□□□□ 0.79
PTPRU-208ENST00000493601 GPATCH3Q96I76 525 aa20■□□□□ 0.79
PTPRU-208ENST00000493601 CCDC17Q96LX7 622 aa20■□□□□ 0.79
PTPRU-208ENST00000493601 SLC4A4Q9Y6R1 1079 aa20■□□□□ 0.79
PTPRU-208ENST00000493601 A0A1W2PPC1 479 aa19.99■□□□□ 0.79
PTPRU-208ENST00000493601 AKR1B1P15121 316 aa19.99■□□□□ 0.79
PTPRU-208ENST00000493601 CCND3P30281 292 aaPredicted RBP19.99■□□□□ 0.79
PTPRU-208ENST00000493601 C16orf86Q6ZW13 317 aa19.99■□□□□ 0.79
PTPRU-208ENST00000493601 C7orf61Q8IZ16 206 aa19.99■□□□□ 0.79
PTPRU-208ENST00000493601 MB21D1Q8N884 522 aa19.99■□□□□ 0.79
PTPRU-208ENST00000493601 ECHDC1Q9NTX5 307 aa19.99■□□□□ 0.79
PTPRU-208ENST00000493601 USP17L12C9JPN9 530 aa19.98■□□□□ 0.79
PTPRU-208ENST00000493601 USP17L21D6R901 530 aa19.98■□□□□ 0.79
PTPRU-208ENST00000493601 HOXC6P09630 235 aa19.98■□□□□ 0.79
PTPRU-208ENST00000493601 CDK8P49336 464 aa19.98■□□□□ 0.79
PTPRU-208ENST00000493601 TMX2Q9Y320 296 aa19.98■□□□□ 0.79
PTPRU-208ENST00000493601 CYP2D7A0A087X1C5 515 aa19.97■□□□□ 0.79
PTPRU-208ENST00000493601 CHGBP05060 677 aa19.97■□□□□ 0.79
PTPRU-208ENST00000493601 ATP2B2Q01814 1243 aa19.97■□□□□ 0.79
PTPRU-208ENST00000493601 LHX8Q68G74 356 aa19.97■□□□□ 0.79
PTPRU-208ENST00000493601 CLEC10AQ8IUN9 316 aa19.97■□□□□ 0.79
PTPRU-208ENST00000493601 SHCBP1Q8NEM2 672 aa19.97■□□□□ 0.79
PTPRU-208ENST00000493601 MOV10L1Q9BXT6 1211 aaKnown RBP19.97■□□□□ 0.79
PTPRU-208ENST00000493601 SPATC1LQ9H0A9 340 aa19.97■□□□□ 0.79
PTPRU-208ENST00000493601 PUS7LQ9H0K6 701 aaKnown RBP19.97■□□□□ 0.79
PTPRU-208ENST00000493601 VCPKMTQ9H867 229 aa19.97■□□□□ 0.79
PTPRU-208ENST00000493601 ARPP21Q9UBL0 812 aaPredicted RBP19.97■□□□□ 0.79
PTPRU-208ENST00000493601 DNAH12Q6ZR08 3092 aa19.96■□□□□ 0.79
PTPRU-208ENST00000493601 WDR46O15213 610 aaKnown RBP19.96■□□□□ 0.79
PTPRU-208ENST00000493601 STRNO43815 780 aa19.96■□□□□ 0.79
PTPRU-208ENST00000493601 FLOT1O75955 427 aa19.96■□□□□ 0.79
PTPRU-208ENST00000493601 KIAA1755Q5JYT7 1200 aa19.96■□□□□ 0.79
PTPRU-208ENST00000493601 SPICE1Q8N0Z3 855 aa19.96■□□□□ 0.79
PTPRU-208ENST00000493601 FLRT1Q9NZU1 646 aa19.96■□□□□ 0.79
PTPRU-208ENST00000493601 LAMA3Q16787 3333 aa19.96■□□□□ 0.79
PTPRU-208ENST00000493601 PFASO15067 1338 aa19.96■□□□□ 0.79
PTPRU-208ENST00000493601 GREB1LQ9C091 1923 aaPredicted RBP19.96■□□□□ 0.79
PTPRU-208ENST00000493601 COL11A1P12107 1806 aaPredicted RBP19.95■□□□□ 0.78
PTPRU-208ENST00000493601 MSCO60682 206 aa19.95■□□□□ 0.78
PTPRU-208ENST00000493601 COL6A1P12109 1028 aa19.95■□□□□ 0.78
PTPRU-208ENST00000493601 CTR9Q6PD62 1173 aa19.95■□□□□ 0.78
PTPRU-208ENST00000493601 SIAH1Q8IUQ4 282 aa19.95■□□□□ 0.78
PTPRU-208ENST00000493601 DCTPP1Q9H773 170 aa19.95■□□□□ 0.78
PTPRU-208ENST00000493601 KANSL2Q9H9L4 492 aa19.95■□□□□ 0.78
PTPRU-208ENST00000493601 STAP2Q9UGK3 403 aa19.95■□□□□ 0.78
PTPRU-208ENST00000493601 SMIM22K7EJ46 135 aa19.94■□□□□ 0.78
PTPRU-208ENST00000493601 ERCC3P19447 782 aa19.94■□□□□ 0.78
PTPRU-208ENST00000493601 ADORA2AP29274 412 aa19.94■□□□□ 0.78
PTPRU-208ENST00000493601 DSG3P32926 999 aa19.94■□□□□ 0.78
PTPRU-208ENST00000493601 DPP9Q86TI2 863 aa19.94■□□□□ 0.78
PTPRU-208ENST00000493601 KBTBD3Q8NAB2 608 aa19.94■□□□□ 0.78
PTPRU-208ENST00000493601 NPLOC4Q8TAT6 608 aa19.94■□□□□ 0.78
PTPRU-208ENST00000493601 MROH8Q9H579 483 aa19.94■□□□□ 0.78
PTPRU-208ENST00000493601 GOPCQ9HD26 462 aa19.94■□□□□ 0.78
PTPRU-208ENST00000493601 EEF2P13639 858 aaKnown RBP19.93■□□□□ 0.78
PTPRU-208ENST00000493601 CNGA1P29973 690 aa19.93■□□□□ 0.78
PTPRU-208ENST00000493601 PLS1Q14651 629 aa19.93■□□□□ 0.78
PTPRU-208ENST00000493601 OLFML2BQ68BL8 750 aa19.93■□□□□ 0.78
PTPRU-208ENST00000493601 GIMAP6Q6P9H5 292 aa19.93■□□□□ 0.78
PTPRU-208ENST00000493601 ATG4CQ96DT6 458 aa19.93■□□□□ 0.78
PTPRU-208ENST00000493601 STRBPQ96SI9 672 aaKnown RBP19.93■□□□□ 0.78
PTPRU-208ENST00000493601 SLC5A4Q9NY91 659 aa19.93■□□□□ 0.78
PTPRU-208ENST00000493601 DDX20Q9UHI6 824 aaKnown RBP19.93■□□□□ 0.78
PTPRU-208ENST00000493601 ZMYND8Q9ULU4 1186 aaPredicted RBP19.93■□□□□ 0.78
PTPRU-208ENST00000493601 ZFYP08048 801 aaPredicted RBP19.92■□□□□ 0.78
PTPRU-208ENST00000493601 CYP2C19P33261 490 aa19.92■□□□□ 0.78
PTPRU-208ENST00000493601 BMP8BP34820 402 aa19.92■□□□□ 0.78
PTPRU-208ENST00000493601 ABRAQ8N0Z2 381 aa19.92■□□□□ 0.78
PTPRU-208ENST00000493601 APPBP2Q92624 585 aa19.92■□□□□ 0.78
PTPRU-208ENST00000493601 GDF15Q99988 308 aa19.92■□□□□ 0.78
PTPRU-208ENST00000493601 ROBO3Q96MS0 1386 aa19.92■□□□□ 0.78
PTPRU-208ENST00000493601 IGHA2P01877 340 aa19.91■□□□□ 0.78
PTPRU-208ENST00000493601 CYBAP13498 195 aa19.91■□□□□ 0.78
PTPRU-208ENST00000493601 LRRFIP1Q32MZ4 808 aaKnown RBP19.91■□□□□ 0.78
PTPRU-208ENST00000493601 SBK1Q52WX2 424 aa19.91■□□□□ 0.78
PTPRU-208ENST00000493601 TSHZ3Q63HK5 1081 aa19.91■□□□□ 0.78
PTPRU-208ENST00000493601 SAMD1Q6SPF0 538 aaPredicted RBP19.91■□□□□ 0.78
PTPRU-208ENST00000493601 NCAPG2Q86XI2 1143 aa19.91■□□□□ 0.78
PTPRU-208ENST00000493601 RNF113AO15541 343 aaKnown RBP19.9■□□□□ 0.78
PTPRU-208ENST00000493601 SLC25A27O95847 323 aa19.9■□□□□ 0.78
PTPRU-208ENST00000493601 SYN1P17600 705 aa19.9■□□□□ 0.78
PTPRU-208ENST00000493601 OSBP2Q969R2 916 aa19.9■□□□□ 0.78
PTPRU-208ENST00000493601 GSG1L2A8MUP6 293 aa19.89■□□□□ 0.77
PTPRU-208ENST00000493601 RAD21O60216 631 aa19.89■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 8.8 ms