RNA–Protein interactions for RNA: ENST00000493348.1

TM4SF1-204, Transcript of transmembrane 4 L six family member 1, humanhuman

TSL 2

Gene TM4SF1, Length 976 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF1-204ENST00000493348 USP17L17D6RBQ6 530 aa9.58□□□□□ -0.88
TM4SF1-204ENST00000493348 USP17L19D6RCP7 530 aa9.58□□□□□ -0.88
TM4SF1-204ENST00000493348 USP17L20D6RJB6 530 aa9.58□□□□□ -0.88
TM4SF1-204ENST00000493348 FOXN1O15353 648 aa9.58□□□□□ -0.88
TM4SF1-204ENST00000493348 LBX1P52954 281 aa9.58□□□□□ -0.88
TM4SF1-204ENST00000493348 PTH1RQ03431 593 aa9.58□□□□□ -0.88
TM4SF1-204ENST00000493348 USP17L24Q0WX57 530 aa9.58□□□□□ -0.88
TM4SF1-204ENST00000493348 IKQ13123 557 aaPredicted RBP9.58□□□□□ -0.88
TM4SF1-204ENST00000493348 CRHR2Q13324 411 aa9.58□□□□□ -0.88
TM4SF1-204ENST00000493348 SHROOM1Q2M3G4 852 aaPredicted RBP9.58□□□□□ -0.88
TM4SF1-204ENST00000493348 FAM43AQ8N2R8 423 aa9.58□□□□□ -0.88
TM4SF1-204ENST00000493348 NCOA7Q8NI08 942 aa9.58□□□□□ -0.88
TM4SF1-204ENST00000493348 MAP4K1Q92918 833 aa9.58□□□□□ -0.88
TM4SF1-204ENST00000493348 CEP95Q96GE4 821 aa9.58□□□□□ -0.88
TM4SF1-204ENST00000493348 VCPKMTQ9H867 229 aa9.58□□□□□ -0.88
TM4SF1-204ENST00000493348 NYAP2Q9P242 653 aa9.58□□□□□ -0.88
TM4SF1-204ENST00000493348 B4E1Z4 1266 aa9.57□□□□□ -0.88
TM4SF1-204ENST00000493348 SMIM22K7EJ46 135 aa9.57□□□□□ -0.88
TM4SF1-204ENST00000493348 WDR46O15213 610 aaKnown RBP9.57□□□□□ -0.88
TM4SF1-204ENST00000493348 FOXP2O15409 715 aa9.57□□□□□ -0.88
TM4SF1-204ENST00000493348 FKTNO75072 461 aa9.57□□□□□ -0.88
TM4SF1-204ENST00000493348 KDM4AO75164 1064 aa9.57□□□□□ -0.88
TM4SF1-204ENST00000493348 GUCY1A2P33402 732 aa9.57□□□□□ -0.88
TM4SF1-204ENST00000493348 GCLCP48506 637 aaPredicted RBP9.57□□□□□ -0.88
TM4SF1-204ENST00000493348 JAG1P78504 1218 aa9.57□□□□□ -0.88
TM4SF1-204ENST00000493348 FGD1P98174 961 aa9.57□□□□□ -0.88
TM4SF1-204ENST00000493348 KRT32Q14532 448 aa9.57□□□□□ -0.88
TM4SF1-204ENST00000493348 TREML2Q5T2D2 321 aa9.57□□□□□ -0.88
TM4SF1-204ENST00000493348 ACER1Q8TDN7 264 aa9.57□□□□□ -0.88
TM4SF1-204ENST00000493348 ERO1AQ96HE7 468 aa9.57□□□□□ -0.88
TM4SF1-204ENST00000493348 PTPN18Q99952 460 aa9.57□□□□□ -0.88
TM4SF1-204ENST00000493348 LSG1Q9H089 658 aaKnown RBP9.57□□□□□ -0.88
TM4SF1-204ENST00000493348 IL25Q9H293 177 aa9.57□□□□□ -0.88
TM4SF1-204ENST00000493348 RPAP3Q9H6T3 665 aaPredicted RBP9.57□□□□□ -0.88
TM4SF1-204ENST00000493348 KAT14Q9H8E8 782 aa9.57□□□□□ -0.88
TM4SF1-204ENST00000493348 MTMR4Q9NYA4 1195 aa9.57□□□□□ -0.88
TM4SF1-204ENST00000493348 SYNPO2Q9UMS6 1093 aa9.57□□□□□ -0.88
TM4SF1-204ENST00000493348 MTMR7Q9Y216 660 aa9.57□□□□□ -0.88
TM4SF1-204ENST00000493348 DDX52Q9Y2R4 599 aaKnown RBP eCLIP9.57□□□□□ -0.88
TM4SF1-204ENST00000493348 TMX2Q9Y320 296 aa9.57□□□□□ -0.88
TM4SF1-204ENST00000493348 PLIN4Q96Q06 1357 aa9.57□□□□□ -0.88
TM4SF1-204ENST00000493348 GREB1LQ9C091 1923 aaPredicted RBP9.56□□□□□ -0.88
TM4SF1-204ENST00000493348 GPR25O00155 361 aa9.56□□□□□ -0.88
TM4SF1-204ENST00000493348 TLR2O60603 784 aa9.56□□□□□ -0.88
TM4SF1-204ENST00000493348 FLOT1O75955 427 aa9.56□□□□□ -0.88
TM4SF1-204ENST00000493348 CYP21A2P08686 494 aa9.56□□□□□ -0.88
TM4SF1-204ENST00000493348 CYP2C8P10632 490 aa9.56□□□□□ -0.88
TM4SF1-204ENST00000493348 HSPA8P11142 646 aaKnown RBP9.56□□□□□ -0.88
TM4SF1-204ENST00000493348 VCAM1P19320 739 aa9.56□□□□□ -0.88
TM4SF1-204ENST00000493348 SP3Q02447 781 aa9.56□□□□□ -0.88
TM4SF1-204ENST00000493348 GPAT2Q6NUI2 795 aa9.56□□□□□ -0.88
TM4SF1-204ENST00000493348 CLEC10AQ8IUN9 316 aa9.56□□□□□ -0.88
TM4SF1-204ENST00000493348 TBC1D10CQ8IV04 446 aa9.56□□□□□ -0.88
TM4SF1-204ENST00000493348 SPICE1Q8N0Z3 855 aa9.56□□□□□ -0.88
TM4SF1-204ENST00000493348 C12orf42Q96LP6 360 aa9.56□□□□□ -0.88
TM4SF1-204ENST00000493348 TTC14Q96N46 770 aa9.56□□□□□ -0.88
TM4SF1-204ENST00000493348 CFHR5Q9BXR6 569 aa9.56□□□□□ -0.88
TM4SF1-204ENST00000493348 ASCC2Q9H1I8 757 aaPredicted RBP9.56□□□□□ -0.88
TM4SF1-204ENST00000493348 INCENPQ9NQS7 918 aa9.56□□□□□ -0.88
TM4SF1-204ENST00000493348 PRDM10Q9NQV6 1147 aa9.56□□□□□ -0.88
TM4SF1-204ENST00000493348 EMILIN3Q9NT22 766 aa9.56□□□□□ -0.88
TM4SF1-204ENST00000493348 TCP11L1Q9NUJ3 509 aa9.56□□□□□ -0.88
TM4SF1-204ENST00000493348 HOXC10Q9NYD6 342 aa9.56□□□□□ -0.88
TM4SF1-204ENST00000493348 NEDD4P46934 1319 aa9.56□□□□□ -0.88
TM4SF1-204ENST00000493348 E7EWF7 191 aa9.55□□□□□ -0.88
TM4SF1-204ENST00000493348 F5H6K3 240 aa9.55□□□□□ -0.88
TM4SF1-204ENST00000493348 IFIT3O14879 490 aaKnown RBP9.55□□□□□ -0.88
TM4SF1-204ENST00000493348 SLC27A2O14975 620 aa9.55□□□□□ -0.88
TM4SF1-204ENST00000493348 FGRP09769 529 aa9.55□□□□□ -0.88
TM4SF1-204ENST00000493348 TOP1P11387 765 aaKnown RBP9.55□□□□□ -0.88
TM4SF1-204ENST00000493348 HOXD10P28358 340 aa9.55□□□□□ -0.88
TM4SF1-204ENST00000493348 HOXA7P31268 230 aaPredicted RBP9.55□□□□□ -0.88
TM4SF1-204ENST00000493348 SLC1A4P43007 532 aa9.55□□□□□ -0.88
TM4SF1-204ENST00000493348 CCNA1P78396 465 aa9.55□□□□□ -0.88
TM4SF1-204ENST00000493348 KLRC3Q07444 240 aa9.55□□□□□ -0.88
TM4SF1-204ENST00000493348 COG2Q14746 738 aa9.55□□□□□ -0.88
TM4SF1-204ENST00000493348 CCDC96Q2M329 555 aa9.55□□□□□ -0.88
TM4SF1-204ENST00000493348 IFIT1BQ5T764 474 aaKnown RBP9.55□□□□□ -0.88
TM4SF1-204ENST00000493348 CREB3L3Q68CJ9 461 aa9.55□□□□□ -0.88
TM4SF1-204ENST00000493348 SLFN13Q68D06 897 aa9.55□□□□□ -0.88
TM4SF1-204ENST00000493348 LRRC47Q8N1G4 583 aaKnown RBP9.55□□□□□ -0.88
TM4SF1-204ENST00000493348 ZSCAN10Q96SZ4 725 aaPredicted RBP9.55□□□□□ -0.88
TM4SF1-204ENST00000493348 ZKSCAN3Q9BRR0 538 aa9.55□□□□□ -0.88
TM4SF1-204ENST00000493348 PAGR1Q9BTK6 254 aa9.55□□□□□ -0.88
TM4SF1-204ENST00000493348 CPA4Q9UI42 421 aa9.55□□□□□ -0.88
TM4SF1-204ENST00000493348 IGKV6D-41A0A0C4DH26 115 aa9.54□□□□□ -0.88
TM4SF1-204ENST00000493348 A0A1W2PRG0 241 aa9.54□□□□□ -0.88
TM4SF1-204ENST00000493348 EPB41L2O43491 1005 aaKnown RBP9.54□□□□□ -0.88
TM4SF1-204ENST00000493348 FMNL1O95466 1100 aaPredicted RBP9.54□□□□□ -0.88
TM4SF1-204ENST00000493348 HMGB1P09429 215 aaKnown RBP9.54□□□□□ -0.88
TM4SF1-204ENST00000493348 BMP3P12645 472 aa9.54□□□□□ -0.88
TM4SF1-204ENST00000493348 PSMA5P28066 241 aa9.54□□□□□ -0.88
TM4SF1-204ENST00000493348 MCM5P33992 734 aa9.54□□□□□ -0.88
TM4SF1-204ENST00000493348 HERVK_113P62684 666 aa9.54□□□□□ -0.88
TM4SF1-204ENST00000493348 DGKZQ13574 1117 aa9.54□□□□□ -0.88
TM4SF1-204ENST00000493348 MOGSQ13724 837 aa9.54□□□□□ -0.88
TM4SF1-204ENST00000493348 PLS1Q14651 629 aa9.54□□□□□ -0.88
TM4SF1-204ENST00000493348 WTAPQ15007 396 aa9.54□□□□□ -0.88
TM4SF1-204ENST00000493348 NOM1Q5C9Z4 860 aaKnown RBP9.54□□□□□ -0.88
TM4SF1-204ENST00000493348 FAM83BQ5T0W9 1011 aa9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms