RNA–Protein interactions for RNA: ENST00000493177.1

MSH6-208, Transcript of mutS homolog 6, humanhuman

TSL 3

Gene MSH6, Length 813 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-208ENST00000493177 C16orf86Q6ZW13 317 aa15.83■□□□□ 0.12
MSH6-208ENST00000493177 SLC44A5Q8NCS7 719 aa15.83■□□□□ 0.12
MSH6-208ENST00000493177 RAET1EQ8TD07 263 aa15.83■□□□□ 0.12
MSH6-208ENST00000493177 WDR18Q9BV38 432 aa15.83■□□□□ 0.12
MSH6-208ENST00000493177 ROBO3Q96MS0 1386 aa15.83■□□□□ 0.12
MSH6-208ENST00000493177 CDK8P49336 464 aa15.82■□□□□ 0.12
MSH6-208ENST00000493177 PRMT2P55345 433 aa15.82■□□□□ 0.12
MSH6-208ENST00000493177 SHROOM1Q2M3G4 852 aaPredicted RBP15.82■□□□□ 0.12
MSH6-208ENST00000493177 ADCK5Q3MIX3 580 aa15.82■□□□□ 0.12
MSH6-208ENST00000493177 TSGA10IPQ3SY00 556 aa15.82■□□□□ 0.12
MSH6-208ENST00000493177 SH3D19Q5HYK7 790 aa15.82■□□□□ 0.12
MSH6-208ENST00000493177 TATDN1Q6P1N9 297 aa15.82■□□□□ 0.12
MSH6-208ENST00000493177 ZNF444Q8N0Y2 327 aaPredicted RBP15.82■□□□□ 0.12
MSH6-208ENST00000493177 ANKRD13CQ8N6S4 541 aa15.82■□□□□ 0.12
MSH6-208ENST00000493177 NCOA7Q8NI08 942 aa15.82■□□□□ 0.12
MSH6-208ENST00000493177 NEK1Q96PY6 1258 aa15.82■□□□□ 0.12
MSH6-208ENST00000493177 KRT23Q9C075 422 aa15.82■□□□□ 0.12
MSH6-208ENST00000493177 CNNM2Q9H8M5 875 aa15.82■□□□□ 0.12
MSH6-208ENST00000493177 SWAP70Q9UH65 585 aa15.82■□□□□ 0.12
MSH6-208ENST00000493177 NEDD4P46934 1319 aa15.82■□□□□ 0.12
MSH6-208ENST00000493177 ADGRA2Q96PE1 1338 aa15.82■□□□□ 0.12
MSH6-208ENST00000493177 B4E1Z4 1266 aa15.81■□□□□ 0.12
MSH6-208ENST00000493177 RANBP6O60518 1105 aaKnown RBP15.81■□□□□ 0.12
MSH6-208ENST00000493177 BCRP11274 1271 aa15.81■□□□□ 0.12
MSH6-208ENST00000493177 PCP11498 1178 aaKnown RBP15.81■□□□□ 0.12
MSH6-208ENST00000493177 CASTP20810 708 aaKnown RBP15.81■□□□□ 0.12
MSH6-208ENST00000493177 JAG1P78504 1218 aa15.81■□□□□ 0.12
MSH6-208ENST00000493177 BLOC1S2Q6QNY1 142 aa15.81■□□□□ 0.12
MSH6-208ENST00000493177 USP17L2Q6R6M4 530 aa15.81■□□□□ 0.12
MSH6-208ENST00000493177 MYPNQ86TC9 1320 aa15.81■□□□□ 0.12
MSH6-208ENST00000493177 TACC3Q9Y6A5 838 aa15.81■□□□□ 0.12
MSH6-208ENST00000493177 TNPO2O14787 897 aaKnown RBP15.8■□□□□ 0.12
MSH6-208ENST00000493177 MYCP01106 439 aaPredicted RBP15.8■□□□□ 0.12
MSH6-208ENST00000493177 SHMT1P34896 483 aa15.8■□□□□ 0.12
MSH6-208ENST00000493177 GCLCP48506 637 aaPredicted RBP15.8■□□□□ 0.12
MSH6-208ENST00000493177 USP14P54578 494 aa15.8■□□□□ 0.12
MSH6-208ENST00000493177 CAP1Q01518 475 aa15.8■□□□□ 0.12
MSH6-208ENST00000493177 GABPAQ06546 454 aa15.8■□□□□ 0.12
MSH6-208ENST00000493177 ESR2Q92731 530 aa15.8■□□□□ 0.12
MSH6-208ENST00000493177 TRIM47Q96LD4 638 aa15.8■□□□□ 0.12
MSH6-208ENST00000493177 TMEM106CQ9BVX2 250 aa15.8■□□□□ 0.12
MSH6-208ENST00000493177 ASCC2Q9H1I8 757 aaPredicted RBP15.8■□□□□ 0.12
MSH6-208ENST00000493177 BIN2Q9UBW5 565 aaPredicted RBP15.8■□□□□ 0.12
MSH6-208ENST00000493177 SRRDQ9UH36 339 aa15.8■□□□□ 0.12
MSH6-208ENST00000493177 TAOK2Q9UL54 1235 aa15.8■□□□□ 0.12
MSH6-208ENST00000493177 DDX52Q9Y2R4 599 aaKnown RBP eCLIP15.8■□□□□ 0.12
MSH6-208ENST00000493177 RBBP6Q7Z6E9 1792 aaKnown RBP15.8■□□□□ 0.12
MSH6-208ENST00000493177 TSPY2A6NKD2 308 aa15.79■□□□□ 0.12
MSH6-208ENST00000493177 ORC4O43929 436 aa15.79■□□□□ 0.12
MSH6-208ENST00000493177 KDM4AO75164 1064 aa15.79■□□□□ 0.12
MSH6-208ENST00000493177 HMGB1P09429 215 aaKnown RBP15.79■□□□□ 0.12
MSH6-208ENST00000493177 RGS19P49795 217 aa15.79■□□□□ 0.12
MSH6-208ENST00000493177 FAM47AQ5JRC9 791 aa15.79■□□□□ 0.12
MSH6-208ENST00000493177 CCAR1Q8IX12 1150 aaKnown RBP15.79■□□□□ 0.12
MSH6-208ENST00000493177 COA7Q96BR5 231 aa15.79■□□□□ 0.12
MSH6-208ENST00000493177 UPF3BQ9BZI7 483 aaKnown RBP15.79■□□□□ 0.12
MSH6-208ENST00000493177 CYP46A1Q9Y6A2 500 aa15.79■□□□□ 0.12
MSH6-208ENST00000493177 FGRP09769 529 aa15.78■□□□□ 0.12
MSH6-208ENST00000493177 TSPY3P0CV98 308 aa15.78■□□□□ 0.12
MSH6-208ENST00000493177 TSPY8P0CW00 308 aa15.78■□□□□ 0.12
MSH6-208ENST00000493177 CPA1P15085 419 aa15.78■□□□□ 0.12
MSH6-208ENST00000493177 MCM5P33992 734 aa15.78■□□□□ 0.12
MSH6-208ENST00000493177 TFAP4Q01664 338 aa15.78■□□□□ 0.12
MSH6-208ENST00000493177 SEPT2Q15019 361 aa15.78■□□□□ 0.12
MSH6-208ENST00000493177 RABEP1Q15276 862 aa15.78■□□□□ 0.12
MSH6-208ENST00000493177 FAM110CQ1W6H9 321 aa15.78■□□□□ 0.12
MSH6-208ENST00000493177 CHST3Q7LGC8 479 aa15.78■□□□□ 0.12
MSH6-208ENST00000493177 SH3TC2Q8TF17 1288 aa15.78■□□□□ 0.12
MSH6-208ENST00000493177 TM6SF1Q9BZW5 370 aa15.78■□□□□ 0.12
MSH6-208ENST00000493177 CWC22Q9HCG8 908 aaKnown RBP15.78■□□□□ 0.12
MSH6-208ENST00000493177 RASA1P20936 1047 aa15.77■□□□□ 0.12
MSH6-208ENST00000493177 RPS6KB1P23443 525 aa15.77■□□□□ 0.12
MSH6-208ENST00000493177 CTGFP29279 349 aa15.77■□□□□ 0.12
MSH6-208ENST00000493177 NEK4P51957 841 aa15.77■□□□□ 0.12
MSH6-208ENST00000493177 FGD1P98174 961 aa15.77■□□□□ 0.12
MSH6-208ENST00000493177 TMEM179Q6ZVK1 233 aa15.77■□□□□ 0.12
MSH6-208ENST00000493177 RUFY3Q7L099 469 aa15.77■□□□□ 0.12
MSH6-208ENST00000493177 DHX32Q7L7V1 743 aaKnown RBP15.77■□□□□ 0.12
MSH6-208ENST00000493177 MB21D2Q8IYB1 491 aaPredicted RBP15.77■□□□□ 0.12
MSH6-208ENST00000493177 ARMC5Q96C12 935 aa15.77■□□□□ 0.12
MSH6-208ENST00000493177 TCEANC2Q96MN5 208 aa15.77■□□□□ 0.12
MSH6-208ENST00000493177 KIF2CQ99661 725 aa15.77■□□□□ 0.12
MSH6-208ENST00000493177 ARHGEF10LQ9HCE6 1279 aa15.77■□□□□ 0.12
MSH6-208ENST00000493177 ZSWIM6Q9HCJ5 1215 aa15.77■□□□□ 0.12
MSH6-208ENST00000493177 PDRG1Q9NUG6 133 aa15.77■□□□□ 0.12
MSH6-208ENST00000493177 PRC1O43663 620 aa15.76■□□□□ 0.11
MSH6-208ENST00000493177 AKR1B1P15121 316 aa15.76■□□□□ 0.11
MSH6-208ENST00000493177 NT5C2P49902 561 aa15.76■□□□□ 0.11
MSH6-208ENST00000493177 ATP2B2Q01814 1243 aa15.76■□□□□ 0.11
MSH6-208ENST00000493177 PRKCZQ05513 592 aa15.76■□□□□ 0.11
MSH6-208ENST00000493177 CYB5R4Q7L1T6 521 aa15.76■□□□□ 0.11
MSH6-208ENST00000493177 IQCA1Q86XH1 822 aa15.76■□□□□ 0.11
MSH6-208ENST00000493177 NKX2-3Q8TAU0 364 aa15.76■□□□□ 0.11
MSH6-208ENST00000493177 GTF3C2Q8WUA4 911 aaPredicted RBP15.76■□□□□ 0.11
MSH6-208ENST00000493177 IL17RAQ96F46 866 aa15.76■□□□□ 0.11
MSH6-208ENST00000493177 CCDC17Q96LX7 622 aa15.76■□□□□ 0.11
MSH6-208ENST00000493177 ZKSCAN3Q9BRR0 538 aa15.76■□□□□ 0.11
MSH6-208ENST00000493177 UBAC1Q9BSL1 405 aa15.76■□□□□ 0.11
MSH6-208ENST00000493177 PAGR1Q9BTK6 254 aa15.76■□□□□ 0.11
MSH6-208ENST00000493177 LRRC2Q9BYS8 371 aa15.76■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms