RNA–Protein interactions for RNA: ENST00000493166.1

CLIP2-209, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

TSL 4

Gene CLIP2, Length 561 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-209ENST00000493166 RPAP3Q9H6T3 665 aaPredicted RBP15.13■□□□□ 0.01
CLIP2-209ENST00000493166 VCPKMTQ9H867 229 aa15.13■□□□□ 0.01
CLIP2-209ENST00000493166 GOPCQ9HD26 462 aa15.13■□□□□ 0.01
CLIP2-209ENST00000493166 MTMR4Q9NYA4 1195 aa15.13■□□□□ 0.01
CLIP2-209ENST00000493166 NYAP2Q9P242 653 aa15.13■□□□□ 0.01
CLIP2-209ENST00000493166 U3KPZ7 1027 aaPredicted RBP15.13■□□□□ 0.01
CLIP2-209ENST00000493166 HTTP42858 3142 aa15.12■□□□□ 0.01
CLIP2-209ENST00000493166 USP17L15C9J2P7 530 aa15.12■□□□□ 0.01
CLIP2-209ENST00000493166 USP17L13C9JLJ4 530 aa15.12■□□□□ 0.01
CLIP2-209ENST00000493166 USP17L11C9JVI0 530 aa15.12■□□□□ 0.01
CLIP2-209ENST00000493166 USP17L18D6R9N7 530 aa15.12■□□□□ 0.01
CLIP2-209ENST00000493166 USP17L22D6RA61 530 aa15.12■□□□□ 0.01
CLIP2-209ENST00000493166 USP17L17D6RBQ6 530 aa15.12■□□□□ 0.01
CLIP2-209ENST00000493166 USP17L19D6RCP7 530 aa15.12■□□□□ 0.01
CLIP2-209ENST00000493166 USP17L20D6RJB6 530 aa15.12■□□□□ 0.01
CLIP2-209ENST00000493166 RAD21O60216 631 aa15.12■□□□□ 0.01
CLIP2-209ENST00000493166 TTLL1O95922 423 aa15.12■□□□□ 0.01
CLIP2-209ENST00000493166 USP17L24Q0WX57 530 aa15.12■□□□□ 0.01
CLIP2-209ENST00000493166 KIF22Q14807 665 aa15.12■□□□□ 0.01
CLIP2-209ENST00000493166 PPP4R3BQ5MIZ7 849 aa15.12■□□□□ 0.01
CLIP2-209ENST00000493166 CTU1Q7Z7A3 348 aaKnown RBP15.12■□□□□ 0.01
CLIP2-209ENST00000493166 SPICE1Q8N0Z3 855 aa15.12■□□□□ 0.01
CLIP2-209ENST00000493166 CLIP2Q9UDT6 1046 aa15.12■□□□□ 0.01
CLIP2-209ENST00000493166 DOCK3Q8IZD9 2030 aa15.12■□□□□ 0.01
CLIP2-209ENST00000493166 NEDD4P46934 1319 aa15.12■□□□□ 0.01
CLIP2-209ENST00000493166 CENPFP49454 3210 aa15.11■□□□□ 0.01
CLIP2-209ENST00000493166 WDR46O15213 610 aaKnown RBP15.11■□□□□ 0.01
CLIP2-209ENST00000493166 BCRP11274 1271 aa15.11■□□□□ 0.01
CLIP2-209ENST00000493166 GCLCP48506 637 aaPredicted RBP15.11■□□□□ 0.01
CLIP2-209ENST00000493166 HERVK_113P62684 666 aa15.11■□□□□ 0.01
CLIP2-209ENST00000493166 KIAA1755Q5JYT7 1200 aa15.11■□□□□ 0.01
CLIP2-209ENST00000493166 ANKRD13CQ8N6S4 541 aa15.11■□□□□ 0.01
CLIP2-209ENST00000493166 ESR2Q92731 530 aa15.11■□□□□ 0.01
CLIP2-209ENST00000493166 TANGO6Q9C0B7 1094 aa15.11■□□□□ 0.01
CLIP2-209ENST00000493166 ANO2Q9NQ90 1003 aa15.11■□□□□ 0.01
CLIP2-209ENST00000493166 NMT2O60551 498 aa15.1■□□□□ 0.01
CLIP2-209ENST00000493166 LACTBP83111 547 aaPredicted RBP15.1■□□□□ 0.01
CLIP2-209ENST00000493166 ARHGEF6Q15052 776 aa15.1■□□□□ 0.01
CLIP2-209ENST00000493166 CATSPERGQ6ZRH7 1159 aa15.1■□□□□ 0.01
CLIP2-209ENST00000493166 LRRC47Q8N1G4 583 aaKnown RBP15.1■□□□□ 0.01
CLIP2-209ENST00000493166 GTF3C2Q8WUA4 911 aaPredicted RBP15.1■□□□□ 0.01
CLIP2-209ENST00000493166 MAP4K1Q92918 833 aa15.1■□□□□ 0.01
CLIP2-209ENST00000493166 P2RX7Q99572 595 aaKnown RBP15.1■□□□□ 0.01
CLIP2-209ENST00000493166 IL17RBQ9NRM6 502 aa15.1■□□□□ 0.01
CLIP2-209ENST00000493166 STX8Q9UNK0 236 aa15.1■□□□□ 0.01
CLIP2-209ENST00000493166 RBM8AQ9Y5S9 174 aaKnown RBP15.1■□□□□ 0.01
CLIP2-209ENST00000493166 PLXNB2O15031 1838 aa15.09■□□□□ 0.01
CLIP2-209ENST00000493166 ECM2O94769 699 aaPredicted RBP15.09■□□□□ 0.01
CLIP2-209ENST00000493166 NT5C2P49902 561 aa15.09■□□□□ 0.01
CLIP2-209ENST00000493166 FAM110CQ1W6H9 321 aa15.09■□□□□ 0.01
CLIP2-209ENST00000493166 MKL1Q969V6 931 aa15.09■□□□□ 0.01
CLIP2-209ENST00000493166 KRT23Q9C075 422 aa15.09■□□□□ 0.01
CLIP2-209ENST00000493166 LSG1Q9H089 658 aaKnown RBP15.09■□□□□ 0.01
CLIP2-209ENST00000493166 CNNM2Q9H8M5 875 aa15.09■□□□□ 0.01
CLIP2-209ENST00000493166 EFCC1Q9HA90 598 aa15.09■□□□□ 0.01
CLIP2-209ENST00000493166 SYNPO2Q9UMS6 1093 aa15.09■□□□□ 0.01
CLIP2-209ENST00000493166 TRIM17Q9Y577 477 aa15.09■□□□□ 0.01
CLIP2-209ENST00000493166 B4E1Z4 1266 aa15.08■□□□□ 0
CLIP2-209ENST00000493166 F5H6K3 240 aa15.08■□□□□ 0
CLIP2-209ENST00000493166 KDM4AO75164 1064 aa15.08■□□□□ 0
CLIP2-209ENST00000493166 NDUFB10O96000 172 aa15.08■□□□□ 0
CLIP2-209ENST00000493166 CYP21A2P08686 494 aa15.08■□□□□ 0
CLIP2-209ENST00000493166 KLRC3Q07444 240 aa15.08■□□□□ 0
CLIP2-209ENST00000493166 OTOP1Q7RTM1 612 aa15.08■□□□□ 0
CLIP2-209ENST00000493166 PAGR1Q9BTK6 254 aa15.08■□□□□ 0
CLIP2-209ENST00000493166 ARHGAP39Q9C0H5 1083 aa15.08■□□□□ 0
CLIP2-209ENST00000493166 MCOLN1Q9GZU1 580 aa15.08■□□□□ 0
CLIP2-209ENST00000493166 TCP11L1Q9NUJ3 509 aa15.08■□□□□ 0
CLIP2-209ENST00000493166 FLOT1O75955 427 aa15.07■□□□□ 0
CLIP2-209ENST00000493166 FMNL1O95466 1100 aaPredicted RBP15.07■□□□□ 0
CLIP2-209ENST00000493166 PSMC4P43686 418 aa15.07■□□□□ 0
CLIP2-209ENST00000493166 FCGRTP55899 365 aa15.07■□□□□ 0
CLIP2-209ENST00000493166 CAP1Q01518 475 aa15.07■□□□□ 0
CLIP2-209ENST00000493166 TRDNQ13061 729 aa15.07■□□□□ 0
CLIP2-209ENST00000493166 COG2Q14746 738 aa15.07■□□□□ 0
CLIP2-209ENST00000493166 PKN2Q16513 984 aaKnown RBP15.07■□□□□ 0
CLIP2-209ENST00000493166 FAM83BQ5T0W9 1011 aa15.07■□□□□ 0
CLIP2-209ENST00000493166 SAMD1Q6SPF0 538 aaPredicted RBP15.07■□□□□ 0
CLIP2-209ENST00000493166 IQCA1Q86XH1 822 aa15.07■□□□□ 0
CLIP2-209ENST00000493166 GMCL1P1Q8NEA9 526 aa15.07■□□□□ 0
CLIP2-209ENST00000493166 NUP88Q99567 741 aaPredicted RBP15.07■□□□□ 0
CLIP2-209ENST00000493166 MORF4L1Q9UBU8 362 aa15.07■□□□□ 0
CLIP2-209ENST00000493166 MYH6P13533 1939 aa15.06■□□□□ 0
CLIP2-209ENST00000493166 ZNFX1Q9P2E3 1918 aaKnown RBP15.06■□□□□ 0
CLIP2-209ENST00000493166 SPDYE16A6NNV3 312 aaPredicted RBP15.06■□□□□ 0
CLIP2-209ENST00000493166 NOVP48745 357 aa15.06■□□□□ 0
CLIP2-209ENST00000493166 SLFN13Q68D06 897 aa15.06■□□□□ 0
CLIP2-209ENST00000493166 LBX2Q6XYB7 198 aa15.06■□□□□ 0
CLIP2-209ENST00000493166 GPRC5AQ8NFJ5 357 aa15.06■□□□□ 0
CLIP2-209ENST00000493166 NKX2-3Q8TAU0 364 aa15.06■□□□□ 0
CLIP2-209ENST00000493166 ZKSCAN3Q9BRR0 538 aa15.06■□□□□ 0
CLIP2-209ENST00000493166 TXNRD2Q9NNW7 524 aa15.06■□□□□ 0
CLIP2-209ENST00000493166 HOXC10Q9NYD6 342 aa15.06■□□□□ 0
CLIP2-209ENST00000493166 ISY1Q9ULR0 285 aaKnown RBP15.06■□□□□ 0
CLIP2-209ENST00000493166 RABGAP1Q9Y3P9 1069 aa15.06■□□□□ 0
CLIP2-209ENST00000493166 MYPNQ86TC9 1320 aa15.06■□□□□ 0
CLIP2-209ENST00000493166 PEX10O60683 326 aa15.05■□□□□ -0
CLIP2-209ENST00000493166 GNRH1P01148 92 aa15.05■□□□□ -0
CLIP2-209ENST00000493166 TOP1P11387 765 aaKnown RBP15.05■□□□□ -0
CLIP2-209ENST00000493166 CTGFP29279 349 aa15.05■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 97.3 ms