RNA–Protein interactions for RNA: ENST00000492851.1

COL6A1-205, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 3

Gene COL6A1, Length 435 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-205ENST00000492851 ICA1Q05084 483 aa14.95□□□□□ -0.02
COL6A1-205ENST00000492851 C16orf86Q6ZW13 317 aa14.95□□□□□ -0.02
COL6A1-205ENST00000492851 ZNF287Q9HBT7 754 aa14.95□□□□□ -0.02
COL6A1-205ENST00000492851 SLC5A4Q9NY91 659 aa14.95□□□□□ -0.02
COL6A1-205ENST00000492851 ERC2O15083 957 aa14.94□□□□□ -0.02
COL6A1-205ENST00000492851 WDR46O15213 610 aaKnown RBP14.94□□□□□ -0.02
COL6A1-205ENST00000492851 MSCO60682 206 aa14.94□□□□□ -0.02
COL6A1-205ENST00000492851 PEX10O60683 326 aa14.94□□□□□ -0.02
COL6A1-205ENST00000492851 ATP2B2Q01814 1243 aa14.94□□□□□ -0.02
COL6A1-205ENST00000492851 CACNB2Q08289 660 aaPredicted RBP14.94□□□□□ -0.02
COL6A1-205ENST00000492851 TRIM32Q13049 653 aa14.94□□□□□ -0.02
COL6A1-205ENST00000492851 SBK1Q52WX2 424 aa14.94□□□□□ -0.02
COL6A1-205ENST00000492851 CTR9Q6PD62 1173 aa14.94□□□□□ -0.02
COL6A1-205ENST00000492851 POTEEQ6S8J3 1075 aa14.94□□□□□ -0.02
COL6A1-205ENST00000492851 CHRDL2Q6WN34 429 aa14.94□□□□□ -0.02
COL6A1-205ENST00000492851 SLC44A5Q8NCS7 719 aa14.94□□□□□ -0.02
COL6A1-205ENST00000492851 SHCBP1Q8NEM2 672 aa14.94□□□□□ -0.02
COL6A1-205ENST00000492851 DYNLL2Q96FJ2 89 aa14.94□□□□□ -0.02
COL6A1-205ENST00000492851 STRBPQ96SI9 672 aaKnown RBP14.94□□□□□ -0.02
COL6A1-205ENST00000492851 PUS7LQ9H0K6 701 aaKnown RBP14.94□□□□□ -0.02
COL6A1-205ENST00000492851 MROH8Q9H579 483 aa14.94□□□□□ -0.02
COL6A1-205ENST00000492851 C11orf49Q9H6J7 331 aa14.94□□□□□ -0.02
COL6A1-205ENST00000492851 VCPKMTQ9H867 229 aa14.94□□□□□ -0.02
COL6A1-205ENST00000492851 BTBD7Q9P203 1132 aa14.94□□□□□ -0.02
COL6A1-205ENST00000492851 ZBTB47Q9UFB7 747 aaPredicted RBP14.94□□□□□ -0.02
COL6A1-205ENST00000492851 TTC41PQ6P2S7 1318 aa14.93□□□□□ -0.02
COL6A1-205ENST00000492851 A0A1W2PPC1 479 aa14.93□□□□□ -0.02
COL6A1-205ENST00000492851 RNF113AO15541 343 aaKnown RBP14.93□□□□□ -0.02
COL6A1-205ENST00000492851 AKR1B1P15121 316 aa14.93□□□□□ -0.02
COL6A1-205ENST00000492851 DSG3P32926 999 aa14.93□□□□□ -0.02
COL6A1-205ENST00000492851 GRB14Q14449 540 aa14.93□□□□□ -0.02
COL6A1-205ENST00000492851 DPP9Q86TI2 863 aa14.93□□□□□ -0.02
COL6A1-205ENST00000492851 APPBP2Q92624 585 aa14.93□□□□□ -0.02
COL6A1-205ENST00000492851 SPATC1LQ9H0A9 340 aa14.93□□□□□ -0.02
COL6A1-205ENST00000492851 GOPCQ9HD26 462 aa14.93□□□□□ -0.02
COL6A1-205ENST00000492851 FLOT1O75955 427 aa14.92□□□□□ -0.02
COL6A1-205ENST00000492851 FXR1P51114 621 aaKnown RBP eCLIP14.92□□□□□ -0.02
COL6A1-205ENST00000492851 SLFNL1Q499Z3 407 aa14.92□□□□□ -0.02
COL6A1-205ENST00000492851 SIAH1Q8IUQ4 282 aa14.92□□□□□ -0.02
COL6A1-205ENST00000492851 ABRAQ8N0Z2 381 aa14.92□□□□□ -0.02
COL6A1-205ENST00000492851 MKNK2Q9HBH9 465 aa14.92□□□□□ -0.02
COL6A1-205ENST00000492851 SLC25A27O95847 323 aa14.91□□□□□ -0.02
COL6A1-205ENST00000492851 EEF2P13639 858 aaKnown RBP14.91□□□□□ -0.02
COL6A1-205ENST00000492851 EVX2Q03828 476 aa14.91□□□□□ -0.02
COL6A1-205ENST00000492851 CCL14Q16627 93 aa14.91□□□□□ -0.02
COL6A1-205ENST00000492851 MOV10L1Q9BXT6 1211 aaKnown RBP14.91□□□□□ -0.02
COL6A1-205ENST00000492851 NACAP1Q9BZK3 213 aa14.91□□□□□ -0.02
COL6A1-205ENST00000492851 RBM27Q9P2N5 1060 aaKnown RBP14.91□□□□□ -0.02
COL6A1-205ENST00000492851 DDX60LQ5H9U9 1706 aaKnown RBP14.91□□□□□ -0.02
COL6A1-205ENST00000492851 NAV1Q8NEY1 1877 aa14.91□□□□□ -0.02
COL6A1-205ENST00000492851 CYP2D7A0A087X1C5 515 aa14.9□□□□□ -0.02
COL6A1-205ENST00000492851 GSG1L2A8MUP6 293 aa14.9□□□□□ -0.02
COL6A1-205ENST00000492851 PATL2C9JE40 543 aaKnown RBP14.9□□□□□ -0.02
COL6A1-205ENST00000492851 APPP05067 770 aa14.9□□□□□ -0.02
COL6A1-205ENST00000492851 ERCC3P19447 782 aa14.9□□□□□ -0.02
COL6A1-205ENST00000492851 COPB2P35606 906 aa14.9□□□□□ -0.02
COL6A1-205ENST00000492851 OLFML2BQ68BL8 750 aa14.9□□□□□ -0.02
COL6A1-205ENST00000492851 LHX8Q68G74 356 aa14.9□□□□□ -0.02
COL6A1-205ENST00000492851 ZNF444Q8N0Y2 327 aaPredicted RBP14.9□□□□□ -0.02
COL6A1-205ENST00000492851 SPICE1Q8N0Z3 855 aa14.9□□□□□ -0.02
COL6A1-205ENST00000492851 MINDY4BA8MYZ0 360 aa14.89□□□□□ -0.03
COL6A1-205ENST00000492851 SLC3A2P08195 630 aaKnown RBP14.89□□□□□ -0.03
COL6A1-205ENST00000492851 FCER1AP12319 257 aa14.89□□□□□ -0.03
COL6A1-205ENST00000492851 ADORA2AP29274 412 aa14.89□□□□□ -0.03
COL6A1-205ENST00000492851 CCND3P30281 292 aaPredicted RBP14.89□□□□□ -0.03
COL6A1-205ENST00000492851 PLS1Q14651 629 aa14.89□□□□□ -0.03
COL6A1-205ENST00000492851 DIS3LQ8TF46 1054 aaKnown RBP14.89□□□□□ -0.03
COL6A1-205ENST00000492851 OSBP2Q969R2 916 aa14.89□□□□□ -0.03
COL6A1-205ENST00000492851 PRO3102Q9H379 93 aa14.89□□□□□ -0.03
COL6A1-205ENST00000492851 NYAP2Q9P242 653 aa14.89□□□□□ -0.03
COL6A1-205ENST00000492851 DDX20Q9UHI6 824 aaKnown RBP14.89□□□□□ -0.03
COL6A1-205ENST00000492851 ADAMTS5Q9UNA0 930 aa14.89□□□□□ -0.03
COL6A1-205ENST00000492851 GPAA1O43292 621 aa14.88□□□□□ -0.03
COL6A1-205ENST00000492851 CHGBP05060 677 aa14.88□□□□□ -0.03
COL6A1-205ENST00000492851 CNGA1P29973 690 aa14.88□□□□□ -0.03
COL6A1-205ENST00000492851 BMP8BP34820 402 aa14.88□□□□□ -0.03
COL6A1-205ENST00000492851 TDO2P48775 406 aa14.88□□□□□ -0.03
COL6A1-205ENST00000492851 MNX1P50219 401 aaPredicted RBP14.88□□□□□ -0.03
COL6A1-205ENST00000492851 AAMPQ13685 434 aa14.88□□□□□ -0.03
COL6A1-205ENST00000492851 KIAA1755Q5JYT7 1200 aa14.88□□□□□ -0.03
COL6A1-205ENST00000492851 NCAPG2Q86XI2 1143 aa14.88□□□□□ -0.03
COL6A1-205ENST00000492851 ARRDC4Q8NCT1 418 aa14.88□□□□□ -0.03
COL6A1-205ENST00000492851 SYNPO2Q9UMS6 1093 aa14.88□□□□□ -0.03
COL6A1-205ENST00000492851 PCDHB15Q9Y5E8 787 aa14.88□□□□□ -0.03
COL6A1-205ENST00000492851 PLXNB2O15031 1838 aa14.87□□□□□ -0.03
COL6A1-205ENST00000492851 DOCK3Q8IZD9 2030 aa14.87□□□□□ -0.03
COL6A1-205ENST00000492851 COL6A1P12109 1028 aa14.87□□□□□ -0.03
COL6A1-205ENST00000492851 PDE4BQ07343 736 aa14.87□□□□□ -0.03
COL6A1-205ENST00000492851 PPP4R3BQ5MIZ7 849 aa14.87□□□□□ -0.03
COL6A1-205ENST00000492851 TICAM2Q86XR7 235 aa14.87□□□□□ -0.03
COL6A1-205ENST00000492851 C7orf61Q8IZ16 206 aa14.87□□□□□ -0.03
COL6A1-205ENST00000492851 NPLOC4Q8TAT6 608 aa14.87□□□□□ -0.03
COL6A1-205ENST00000492851 ATG4CQ96DT6 458 aa14.87□□□□□ -0.03
COL6A1-205ENST00000492851 FLRT1Q9NZU1 646 aa14.87□□□□□ -0.03
COL6A1-205ENST00000492851 F5H6K3 240 aa14.86□□□□□ -0.03
COL6A1-205ENST00000492851 RAD21O60216 631 aa14.86□□□□□ -0.03
COL6A1-205ENST00000492851 IGHA2P01877 340 aa14.86□□□□□ -0.03
COL6A1-205ENST00000492851 MX1P20591 662 aa14.86□□□□□ -0.03
COL6A1-205ENST00000492851 RASA1P20936 1047 aa14.86□□□□□ -0.03
COL6A1-205ENST00000492851 CYP2C19P33261 490 aa14.86□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms