RNA–Protein interactions for RNA: ENST00000492571.1

TNFRSF9-203, Transcript of TNF receptor superfamily member 9, humanhuman

TSL 3

Gene TNFRSF9, Length 584 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF9-203ENST00000492571 RABGAP1Q9Y3P9 1069 aa11.95□□□□□ -0.5
TNFRSF9-203ENST00000492571 COL2A1P02458 1487 aaPredicted RBP11.95□□□□□ -0.5
TNFRSF9-203ENST00000492571 USP17L15C9J2P7 530 aa11.94□□□□□ -0.5
TNFRSF9-203ENST00000492571 USP17L13C9JLJ4 530 aa11.94□□□□□ -0.5
TNFRSF9-203ENST00000492571 USP17L11C9JVI0 530 aa11.94□□□□□ -0.5
TNFRSF9-203ENST00000492571 USP17L18D6R9N7 530 aa11.94□□□□□ -0.5
TNFRSF9-203ENST00000492571 USP17L22D6RA61 530 aa11.94□□□□□ -0.5
TNFRSF9-203ENST00000492571 USP17L17D6RBQ6 530 aa11.94□□□□□ -0.5
TNFRSF9-203ENST00000492571 USP17L19D6RCP7 530 aa11.94□□□□□ -0.5
TNFRSF9-203ENST00000492571 USP17L20D6RJB6 530 aa11.94□□□□□ -0.5
TNFRSF9-203ENST00000492571 CT47B1P0C2W7 299 aaPredicted RBP11.94□□□□□ -0.5
TNFRSF9-203ENST00000492571 USP14P54578 494 aa11.94□□□□□ -0.5
TNFRSF9-203ENST00000492571 PTPN5P54829 565 aa11.94□□□□□ -0.5
TNFRSF9-203ENST00000492571 USP17L24Q0WX57 530 aa11.94□□□□□ -0.5
TNFRSF9-203ENST00000492571 Q3C1V9 767 aa11.94□□□□□ -0.5
TNFRSF9-203ENST00000492571 CCDC158Q5M9N0 1113 aa11.94□□□□□ -0.5
TNFRSF9-203ENST00000492571 MORN1Q5T089 497 aa11.94□□□□□ -0.5
TNFRSF9-203ENST00000492571 ARRDC4Q8NCT1 418 aa11.94□□□□□ -0.5
TNFRSF9-203ENST00000492571 TGFBRAP1Q8WUH2 860 aa11.94□□□□□ -0.5
TNFRSF9-203ENST00000492571 AATFQ9NY61 560 aaKnown RBP eCLIP11.94□□□□□ -0.5
TNFRSF9-203ENST00000492571 ZNF521Q96K83 1311 aa11.93□□□□□ -0.5
TNFRSF9-203ENST00000492571 DNM1LO00429 736 aa11.93□□□□□ -0.5
TNFRSF9-203ENST00000492571 IGSF3O75054 1194 aa11.93□□□□□ -0.5
TNFRSF9-203ENST00000492571 GDF11O95390 407 aa11.93□□□□□ -0.5
TNFRSF9-203ENST00000492571 RRP1BQ14684 758 aaKnown RBP11.93□□□□□ -0.5
TNFRSF9-203ENST00000492571 CCL14Q16627 93 aa11.93□□□□□ -0.5
TNFRSF9-203ENST00000492571 TTC39AQ5SRH9 613 aa11.93□□□□□ -0.5
TNFRSF9-203ENST00000492571 MAPKAPK5Q8IW41 473 aa11.93□□□□□ -0.5
TNFRSF9-203ENST00000492571 LPAR1Q92633 364 aa11.93□□□□□ -0.5
TNFRSF9-203ENST00000492571 USP6NLQ92738 828 aa11.93□□□□□ -0.5
TNFRSF9-203ENST00000492571 PORCNQ9H237 461 aa11.93□□□□□ -0.5
TNFRSF9-203ENST00000492571 DDX20Q9UHI6 824 aaKnown RBP11.93□□□□□ -0.5
TNFRSF9-203ENST00000492571 ZBTB21Q9ULJ3 1066 aa11.93□□□□□ -0.5
TNFRSF9-203ENST00000492571 DOCK2Q92608 1830 aa11.93□□□□□ -0.5
TNFRSF9-203ENST00000492571 SLC15A5A6NIM6 579 aa11.92□□□□□ -0.5
TNFRSF9-203ENST00000492571 KBTBD13C9JR72 458 aa11.92□□□□□ -0.5
TNFRSF9-203ENST00000492571 ARID4AP29374 1257 aaPredicted RBP11.92□□□□□ -0.5
TNFRSF9-203ENST00000492571 PPP4CP60510 307 aa11.92□□□□□ -0.5
TNFRSF9-203ENST00000492571 SLFN5Q08AF3 891 aa11.92□□□□□ -0.5
TNFRSF9-203ENST00000492571 PI16Q6UXB8 463 aa11.92□□□□□ -0.5
TNFRSF9-203ENST00000492571 THSD4Q6ZMP0 1018 aa11.92□□□□□ -0.5
TNFRSF9-203ENST00000492571 DPP9Q86TI2 863 aa11.92□□□□□ -0.5
TNFRSF9-203ENST00000492571 CERS3Q8IU89 383 aa11.92□□□□□ -0.5
TNFRSF9-203ENST00000492571 ZNF384Q8TF68 577 aa11.92□□□□□ -0.5
TNFRSF9-203ENST00000492571 SYMPKQ92797 1274 aaKnown RBP11.92□□□□□ -0.5
TNFRSF9-203ENST00000492571 GUCD1Q96NT3 240 aa11.92□□□□□ -0.5
TNFRSF9-203ENST00000492571 MEIS3Q99687 375 aa11.92□□□□□ -0.5
TNFRSF9-203ENST00000492571 SLC5A4Q9NY91 659 aa11.92□□□□□ -0.5
TNFRSF9-203ENST00000492571 PALD1Q9ULE6 856 aa11.92□□□□□ -0.5
TNFRSF9-203ENST00000492571 ATP11BQ9Y2G3 1177 aa11.92□□□□□ -0.5
TNFRSF9-203ENST00000492571 DOCK1Q14185 1865 aa11.91□□□□□ -0.5
TNFRSF9-203ENST00000492571 PEX10O60683 326 aa11.91□□□□□ -0.5
TNFRSF9-203ENST00000492571 ZYXQ15942 572 aaKnown RBP11.91□□□□□ -0.5
TNFRSF9-203ENST00000492571 METTL16Q86W50 562 aaKnown RBP11.91□□□□□ -0.5
TNFRSF9-203ENST00000492571 CABP5Q9NP86 173 aa11.91□□□□□ -0.5
TNFRSF9-203ENST00000492571 PRDM5Q9NQX1 630 aaPredicted RBP11.91□□□□□ -0.5
TNFRSF9-203ENST00000492571 MYH2Q9UKX2 1941 aa11.91□□□□□ -0.5
TNFRSF9-203ENST00000492571 MYH13Q9UKX3 1938 aa11.91□□□□□ -0.5
TNFRSF9-203ENST00000492571 UNC80Q8N2C7 3258 aa11.91□□□□□ -0.5
TNFRSF9-203ENST00000492571 FLT1P17948 1338 aa11.9□□□□□ -0.5
TNFRSF9-203ENST00000492571 GH2P01242 217 aa11.9□□□□□ -0.5
TNFRSF9-203ENST00000492571 GNAI2P04899 355 aa11.9□□□□□ -0.5
TNFRSF9-203ENST00000492571 MCAMP43121 646 aa11.9□□□□□ -0.5
TNFRSF9-203ENST00000492571 USP5P45974 858 aa11.9□□□□□ -0.5
TNFRSF9-203ENST00000492571 RTP1P59025 263 aa11.9□□□□□ -0.5
TNFRSF9-203ENST00000492571 OS9Q13438 667 aaPredicted RBP11.9□□□□□ -0.5
TNFRSF9-203ENST00000492571 MTX1Q13505 466 aa11.9□□□□□ -0.5
TNFRSF9-203ENST00000492571 RAB3GAP1Q15042 981 aa11.9□□□□□ -0.5
TNFRSF9-203ENST00000492571 TTC6Q86TZ1 520 aa11.9□□□□□ -0.5
TNFRSF9-203ENST00000492571 MAFAQ8NHW3 353 aaPredicted RBP11.9□□□□□ -0.5
TNFRSF9-203ENST00000492571 CDX2Q99626 313 aaPredicted RBP11.9□□□□□ -0.5
TNFRSF9-203ENST00000492571 SNRKQ9NRH2 765 aa11.9□□□□□ -0.5
TNFRSF9-203ENST00000492571 SAP30BPQ9UHR5 308 aaKnown RBP11.9□□□□□ -0.5
TNFRSF9-203ENST00000492571 NDUFB9Q9Y6M9 179 aa11.9□□□□□ -0.5
TNFRSF9-203ENST00000492571 IPO8O15397 1037 aaKnown RBP11.89□□□□□ -0.51
TNFRSF9-203ENST00000492571 STRNO43815 780 aa11.89□□□□□ -0.51
TNFRSF9-203ENST00000492571 HOXC6P09630 235 aa11.89□□□□□ -0.51
TNFRSF9-203ENST00000492571 CERKLQ49MI3 558 aaPredicted RBP11.89□□□□□ -0.51
TNFRSF9-203ENST00000492571 C6orf132Q5T0Z8 1188 aa11.89□□□□□ -0.51
TNFRSF9-203ENST00000492571 CATSPERGQ6ZRH7 1159 aa11.89□□□□□ -0.51
TNFRSF9-203ENST00000492571 ARHGAP45Q92619 1136 aa11.89□□□□□ -0.51
TNFRSF9-203ENST00000492571 DDX12PQ92771 950 aa11.89□□□□□ -0.51
TNFRSF9-203ENST00000492571 WNT2BQ93097 391 aa11.89□□□□□ -0.51
TNFRSF9-203ENST00000492571 C12orf42Q96LP6 360 aa11.89□□□□□ -0.51
TNFRSF9-203ENST00000492571 SEMA6BQ9H3T3 888 aa11.89□□□□□ -0.51
TNFRSF9-203ENST00000492571 HOXC10Q9NYD6 342 aa11.89□□□□□ -0.51
TNFRSF9-203ENST00000492571 SERPINB13Q9UIV8 391 aa11.89□□□□□ -0.51
TNFRSF9-203ENST00000492571 GOLGA8CPA6NN73 597 aa11.88□□□□□ -0.51
TNFRSF9-203ENST00000492571 CYP2C19P33261 490 aa11.88□□□□□ -0.51
TNFRSF9-203ENST00000492571 JAG1P78504 1218 aa11.88□□□□□ -0.51
TNFRSF9-203ENST00000492571 SMAD3P84022 425 aaKnown RBP11.88□□□□□ -0.51
TNFRSF9-203ENST00000492571 SHHQ15465 462 aa11.88□□□□□ -0.51
TNFRSF9-203ENST00000492571 ABCB5Q2M3G0 1257 aa11.88□□□□□ -0.51
TNFRSF9-203ENST00000492571 GJC2Q5T442 439 aaPredicted RBP11.88□□□□□ -0.51
TNFRSF9-203ENST00000492571 SLC39A5Q6ZMH5 540 aa11.88□□□□□ -0.51
TNFRSF9-203ENST00000492571 EPAS1Q99814 870 aa11.88□□□□□ -0.51
TNFRSF9-203ENST00000492571 KIAA1683Q9H0B3 1180 aa11.88□□□□□ -0.51
TNFRSF9-203ENST00000492571 RABGEF1Q9UJ41 708 aa11.88□□□□□ -0.51
TNFRSF9-203ENST00000492571 DDX60LQ5H9U9 1706 aaKnown RBP11.88□□□□□ -0.51
TNFRSF9-203ENST00000492571 DOCK3Q8IZD9 2030 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms