RNA–Protein interactions for RNA: ENST00000492462.1

MDC1-207, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 3

Gene MDC1, Length 819 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-207ENST00000492462 CCL5P13501 91 aa14.11□□□□□ -0.15
MDC1-207ENST00000492462 TDO2P48775 406 aa14.11□□□□□ -0.15
MDC1-207ENST00000492462 ERVK-9P63128 1117 aa14.11□□□□□ -0.15
MDC1-207ENST00000492462 ERVK-24P63145 666 aa14.11□□□□□ -0.15
MDC1-207ENST00000492462 ICA1Q05084 483 aa14.11□□□□□ -0.15
MDC1-207ENST00000492462 IRF5Q13568 498 aa14.11□□□□□ -0.15
MDC1-207ENST00000492462 GIMAP6Q6P9H5 292 aa14.11□□□□□ -0.15
MDC1-207ENST00000492462 IFNL3Q8IZI9 196 aa14.11□□□□□ -0.15
MDC1-207ENST00000492462 SPICE1Q8N0Z3 855 aa14.11□□□□□ -0.15
MDC1-207ENST00000492462 CCDC17Q96LX7 622 aa14.11□□□□□ -0.15
MDC1-207ENST00000492462 BIN2Q9UBW5 565 aaPredicted RBP14.11□□□□□ -0.15
MDC1-207ENST00000492462 ROBO3Q96MS0 1386 aa14.1□□□□□ -0.15
MDC1-207ENST00000492462 SPDYE16A6NNV3 312 aaPredicted RBP14.1□□□□□ -0.15
MDC1-207ENST00000492462 PRDM1O75626 825 aa14.1□□□□□ -0.15
MDC1-207ENST00000492462 INHAP05111 366 aa14.1□□□□□ -0.15
MDC1-207ENST00000492462 EEF2P13639 858 aaKnown RBP14.1□□□□□ -0.15
MDC1-207ENST00000492462 GNAT2P19087 354 aa14.1□□□□□ -0.15
MDC1-207ENST00000492462 ATP2B2Q01814 1243 aa14.1□□□□□ -0.15
MDC1-207ENST00000492462 NUCB1Q02818 461 aa14.1□□□□□ -0.15
MDC1-207ENST00000492462 LRRFIP1Q32MZ4 808 aaKnown RBP14.1□□□□□ -0.15
MDC1-207ENST00000492462 CHD1LQ86WJ1 897 aa14.1□□□□□ -0.15
MDC1-207ENST00000492462 SLAIN1Q8ND83 568 aa14.1□□□□□ -0.15
MDC1-207ENST00000492462 EVI5LQ96CN4 794 aa14.1□□□□□ -0.15
MDC1-207ENST00000492462 SHISA4Q96DD7 197 aa14.1□□□□□ -0.15
MDC1-207ENST00000492462 UNC93B1Q9H1C4 597 aa14.1□□□□□ -0.15
MDC1-207ENST00000492462 BTBD7Q9P203 1132 aa14.1□□□□□ -0.15
MDC1-207ENST00000492462 TMX2Q9Y320 296 aa14.1□□□□□ -0.15
MDC1-207ENST00000492462 PARP14Q460N5 1801 aa14.1□□□□□ -0.15
MDC1-207ENST00000492462 H0YGN5 161 aa14.09□□□□□ -0.15
MDC1-207ENST00000492462 TRIM32Q13049 653 aa14.09□□□□□ -0.15
MDC1-207ENST00000492462 VPS53Q5VIR6 699 aa14.09□□□□□ -0.15
MDC1-207ENST00000492462 CHRDL2Q6WN34 429 aa14.09□□□□□ -0.15
MDC1-207ENST00000492462 PLEKHM2Q8IWE5 1019 aa14.09□□□□□ -0.15
MDC1-207ENST00000492462 FAM227BQ96M60 508 aa14.09□□□□□ -0.15
MDC1-207ENST00000492462 VCPKMTQ9H867 229 aa14.09□□□□□ -0.15
MDC1-207ENST00000492462 ARHGEF10LQ9HCE6 1279 aa14.09□□□□□ -0.15
MDC1-207ENST00000492462 RABGAP1Q9Y3P9 1069 aa14.09□□□□□ -0.15
MDC1-207ENST00000492462 A0A0G2JMZ2 1700 aa14.08□□□□□ -0.16
MDC1-207ENST00000492462 A0A0D9SFI3 127 aa14.08□□□□□ -0.16
MDC1-207ENST00000492462 CYP2B6P20813 491 aa14.08□□□□□ -0.16
MDC1-207ENST00000492462 LBX2Q6XYB7 198 aa14.08□□□□□ -0.16
MDC1-207ENST00000492462 PXYLP1Q8TE99 480 aa14.08□□□□□ -0.16
MDC1-207ENST00000492462 COL25A1Q9BXS0 654 aaPredicted RBP14.08□□□□□ -0.16
MDC1-207ENST00000492462 TANGO6Q9C0B7 1094 aa14.08□□□□□ -0.16
MDC1-207ENST00000492462 RNF208Q9H0X6 261 aa14.08□□□□□ -0.16
MDC1-207ENST00000492462 KANSL2Q9H9L4 492 aa14.08□□□□□ -0.16
MDC1-207ENST00000492462 MKNK2Q9HBH9 465 aa14.08□□□□□ -0.16
MDC1-207ENST00000492462 MYH4Q9Y623 1939 aa14.07□□□□□ -0.16
MDC1-207ENST00000492462 COL11A1P12107 1806 aaPredicted RBP14.07□□□□□ -0.16
MDC1-207ENST00000492462 UBXN2AP68543 259 aa14.07□□□□□ -0.16
MDC1-207ENST00000492462 GPR142Q7Z601 462 aa14.07□□□□□ -0.16
MDC1-207ENST00000492462 GTF3C2Q8WUA4 911 aaPredicted RBP14.07□□□□□ -0.16
MDC1-207ENST00000492462 USP6NLQ92738 828 aa14.07□□□□□ -0.16
MDC1-207ENST00000492462 NAPBQ9H115 298 aa14.07□□□□□ -0.16
MDC1-207ENST00000492462 INCENPQ9NQS7 918 aa14.07□□□□□ -0.16
MDC1-207ENST00000492462 RBM27Q9P2N5 1060 aaKnown RBP14.07□□□□□ -0.16
MDC1-207ENST00000492462 TACC3Q9Y6A5 838 aa14.07□□□□□ -0.16
MDC1-207ENST00000492462 LAMA3Q16787 3333 aa14.07□□□□□ -0.16
MDC1-207ENST00000492462 IGKV6D-41A0A0C4DH26 115 aa14.06□□□□□ -0.16
MDC1-207ENST00000492462 TRIM6-TRIM34B2RNG4 842 aa14.06□□□□□ -0.16
MDC1-207ENST00000492462 GJB1P08034 283 aa14.06□□□□□ -0.16
MDC1-207ENST00000492462 MAPK4P31152 587 aa14.06□□□□□ -0.16
MDC1-207ENST00000492462 PPARAQ07869 468 aa14.06□□□□□ -0.16
MDC1-207ENST00000492462 NMIQ13287 307 aaPredicted RBP14.06□□□□□ -0.16
MDC1-207ENST00000492462 COG2Q14746 738 aa14.06□□□□□ -0.16
MDC1-207ENST00000492462 MORN1Q5T089 497 aa14.06□□□□□ -0.16
MDC1-207ENST00000492462 SAMD1Q6SPF0 538 aaPredicted RBP14.06□□□□□ -0.16
MDC1-207ENST00000492462 PLEKHH3Q7Z736 793 aa14.06□□□□□ -0.16
MDC1-207ENST00000492462 ZNF589Q86UQ0 364 aaPredicted RBP14.06□□□□□ -0.16
MDC1-207ENST00000492462 TRIB2Q92519 343 aa14.06□□□□□ -0.16
MDC1-207ENST00000492462 LPAR1Q92633 364 aa14.06□□□□□ -0.16
MDC1-207ENST00000492462 ATG4CQ96DT6 458 aa14.06□□□□□ -0.16
MDC1-207ENST00000492462 NUDT12Q9BQG2 462 aa14.06□□□□□ -0.16
MDC1-207ENST00000492462 NACAP1Q9BZK3 213 aa14.06□□□□□ -0.16
MDC1-207ENST00000492462 FBXO28Q9NVF7 368 aa14.06□□□□□ -0.16
MDC1-207ENST00000492462 VCANP13611 3396 aa14.05□□□□□ -0.16
MDC1-207ENST00000492462 RAD21O60216 631 aa14.05□□□□□ -0.16
MDC1-207ENST00000492462 FLOT1O75955 427 aa14.05□□□□□ -0.16
MDC1-207ENST00000492462 HMGCRP04035 888 aa14.05□□□□□ -0.16
MDC1-207ENST00000492462 PDE4AP27815 886 aa14.05□□□□□ -0.16
MDC1-207ENST00000492462 DSG3P32926 999 aa14.05□□□□□ -0.16
MDC1-207ENST00000492462 GJA8P48165 433 aa14.05□□□□□ -0.16
MDC1-207ENST00000492462 CTDSPL2Q05D32 466 aa14.05□□□□□ -0.16
MDC1-207ENST00000492462 CCL14Q16627 93 aa14.05□□□□□ -0.16
MDC1-207ENST00000492462 FAM47AQ5JRC9 791 aa14.05□□□□□ -0.16
MDC1-207ENST00000492462 WDR78Q5VTH9 848 aa14.05□□□□□ -0.16
MDC1-207ENST00000492462 CCAR1Q8IX12 1150 aaKnown RBP14.05□□□□□ -0.16
MDC1-207ENST00000492462 U2AF1L4Q8WU68 220 aaKnown RBP14.05□□□□□ -0.16
MDC1-207ENST00000492462 RILPL2Q969X0 211 aa14.05□□□□□ -0.16
MDC1-207ENST00000492462 NUP88Q99567 741 aaPredicted RBP14.05□□□□□ -0.16
MDC1-207ENST00000492462 MOV10L1Q9BXT6 1211 aaKnown RBP14.05□□□□□ -0.16
MDC1-207ENST00000492462 OSBPL3Q9H4L5 887 aa14.05□□□□□ -0.16
MDC1-207ENST00000492462 SH2D4AQ9H788 454 aa14.05□□□□□ -0.16
MDC1-207ENST00000492462 HELLSQ9NRZ9 838 aa14.05□□□□□ -0.16
MDC1-207ENST00000492462 WDR46O15213 610 aaKnown RBP14.04□□□□□ -0.16
MDC1-207ENST00000492462 FAM83BQ5T0W9 1011 aa14.04□□□□□ -0.16
MDC1-207ENST00000492462 ZNF444Q8N0Y2 327 aaPredicted RBP14.04□□□□□ -0.16
MDC1-207ENST00000492462 SOCS4Q8WXH5 440 aa14.04□□□□□ -0.16
MDC1-207ENST00000492462 CEP95Q96GE4 821 aa14.04□□□□□ -0.16
MDC1-207ENST00000492462 DEFB118Q96PH6 123 aa14.04□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms