RNA–Protein interactions for RNA: ENST00000492455.1

HMGB1P30-201, Transcript of high mobility group box 1 pseudogene 30, humanhuman

BASIC

Gene HMGB1P30, Length 606 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P30-201ENST00000492455 SIGLEC10Q96LC7 697 aa4.92□□□□□ -1.62
HMGB1P30-201ENST00000492455 SGPP1Q9BX95 441 aa4.92□□□□□ -1.62
HMGB1P30-201ENST00000492455 GPR160Q9UJ42 338 aa4.92□□□□□ -1.62
HMGB1P30-201ENST00000492455 E9PSI1 815 aa4.91□□□□□ -1.62
HMGB1P30-201ENST00000492455 GIPC1O14908 333 aa4.91□□□□□ -1.62
HMGB1P30-201ENST00000492455 USP17L7P0C7H9 530 aa4.91□□□□□ -1.62
HMGB1P30-201ENST00000492455 EIF4BP23588 611 aaKnown RBP4.91□□□□□ -1.62
HMGB1P30-201ENST00000492455 TPP2P29144 1249 aaPredicted RBP4.91□□□□□ -1.62
HMGB1P30-201ENST00000492455 CAP2P40123 477 aa4.91□□□□□ -1.62
HMGB1P30-201ENST00000492455 SLBPQ14493 270 aaKnown RBP eCLIP4.91□□□□□ -1.62
HMGB1P30-201ENST00000492455 SSPNQ14714 243 aa4.91□□□□□ -1.62
HMGB1P30-201ENST00000492455 SNX17Q15036 470 aa4.91□□□□□ -1.62
HMGB1P30-201ENST00000492455 TSNAXIP1Q2TAA8 658 aa4.91□□□□□ -1.62
HMGB1P30-201ENST00000492455 MEI1Q5TIA1 1274 aa4.91□□□□□ -1.62
HMGB1P30-201ENST00000492455 MPRIPQ6WCQ1 1025 aa4.91□□□□□ -1.62
HMGB1P30-201ENST00000492455 HID1Q8IV36 788 aa4.91□□□□□ -1.62
HMGB1P30-201ENST00000492455 FEZF2Q8TBJ5 459 aa4.91□□□□□ -1.62
HMGB1P30-201ENST00000492455 GRIN3AQ8TCU5 1115 aa4.91□□□□□ -1.62
HMGB1P30-201ENST00000492455 XAGE3Q8WTP9 111 aa4.91□□□□□ -1.62
HMGB1P30-201ENST00000492455 CRELD1Q96HD1 420 aa4.91□□□□□ -1.62
HMGB1P30-201ENST00000492455 FBRSQ9HAH7 460 aa4.91□□□□□ -1.62
HMGB1P30-201ENST00000492455 GPATCH2Q9NW75 528 aa4.91□□□□□ -1.62
HMGB1P30-201ENST00000492455 VTI1BQ9UEU0 232 aa4.91□□□□□ -1.62
HMGB1P30-201ENST00000492455 DUSP13Q9UII6 198 aa4.91□□□□□ -1.62
HMGB1P30-201ENST00000492455 LTKP29376 864 aa4.9□□□□□ -1.63
HMGB1P30-201ENST00000492455 ETV3P41162 512 aa4.9□□□□□ -1.63
HMGB1P30-201ENST00000492455 CHRNEQ04844 493 aa4.9□□□□□ -1.63
HMGB1P30-201ENST00000492455 PLP2Q04941 152 aa4.9□□□□□ -1.63
HMGB1P30-201ENST00000492455 EGR3Q06889 387 aa4.9□□□□□ -1.63
HMGB1P30-201ENST00000492455 NR0B2Q15466 257 aa4.9□□□□□ -1.63
HMGB1P30-201ENST00000492455 ZDHHC14Q8IZN3 488 aa4.9□□□□□ -1.63
HMGB1P30-201ENST00000492455 RIN3Q8TB24 985 aa4.9□□□□□ -1.63
HMGB1P30-201ENST00000492455 PPP1R13LQ8WUF5 828 aa4.9□□□□□ -1.63
HMGB1P30-201ENST00000492455 TEPSINQ96N21 525 aa4.9□□□□□ -1.63
HMGB1P30-201ENST00000492455 NECAB3Q96P71 396 aaPredicted RBP4.9□□□□□ -1.63
HMGB1P30-201ENST00000492455 GPR20Q99678 358 aa4.9□□□□□ -1.63
HMGB1P30-201ENST00000492455 SRCIN1Q9C0H9 1055 aa4.9□□□□□ -1.63
HMGB1P30-201ENST00000492455 WNT10AQ9GZT5 417 aa4.9□□□□□ -1.63
HMGB1P30-201ENST00000492455 GCM1Q9NP62 436 aa4.9□□□□□ -1.63
HMGB1P30-201ENST00000492455 SIRT5Q9NXA8 310 aa4.9□□□□□ -1.63
HMGB1P30-201ENST00000492455 FAM8A1Q9UBU6 413 aa4.9□□□□□ -1.63
HMGB1P30-201ENST00000492455 OR14I1A6ND48 311 aa4.89□□□□□ -1.63
HMGB1P30-201ENST00000492455 ZGLP1P0C6A0 271 aa4.89□□□□□ -1.63
HMGB1P30-201ENST00000492455 FANCCQ00597 558 aa4.89□□□□□ -1.63
HMGB1P30-201ENST00000492455 DUSP4Q13115 394 aa4.89□□□□□ -1.63
HMGB1P30-201ENST00000492455 PUM1Q14671 1186 aaKnown RBP eCLIP4.89□□□□□ -1.63
HMGB1P30-201ENST00000492455 PRAMEF13Q5VWM6 474 aa4.89□□□□□ -1.63
HMGB1P30-201ENST00000492455 TPTE2Q6XPS3 522 aa4.89□□□□□ -1.63
HMGB1P30-201ENST00000492455 METTL16Q86W50 562 aaKnown RBP4.89□□□□□ -1.63
HMGB1P30-201ENST00000492455 ANKRD24Q8TF21 1146 aa4.89□□□□□ -1.63
HMGB1P30-201ENST00000492455 MRS2Q9HD23 443 aa4.89□□□□□ -1.63
HMGB1P30-201ENST00000492455 PALD1Q9ULE6 856 aa4.89□□□□□ -1.63
HMGB1P30-201ENST00000492455 USP31Q70CQ4 1352 aa4.89□□□□□ -1.63
HMGB1P30-201ENST00000492455 ZC3H12DA2A288 527 aaKnown RBP4.88□□□□□ -1.63
HMGB1P30-201ENST00000492455 SLC22A31A6NKX4 558 aa4.88□□□□□ -1.63
HMGB1P30-201ENST00000492455 CST3P01034 146 aaPredicted RBP4.88□□□□□ -1.63
HMGB1P30-201ENST00000492455 INSRRP14616 1297 aa4.88□□□□□ -1.63
HMGB1P30-201ENST00000492455 BMP6P22004 513 aa4.88□□□□□ -1.63
HMGB1P30-201ENST00000492455 GSTT1P30711 240 aa4.88□□□□□ -1.63
HMGB1P30-201ENST00000492455 HDLBPQ00341 1268 aaKnown RBP4.88□□□□□ -1.63
HMGB1P30-201ENST00000492455 NKG7Q16617 165 aa4.88□□□□□ -1.63
HMGB1P30-201ENST00000492455 LRFN4Q6PJG9 635 aa4.88□□□□□ -1.63
HMGB1P30-201ENST00000492455 CDH24Q86UP0 819 aa4.88□□□□□ -1.63
HMGB1P30-201ENST00000492455 DACT3Q96B18 629 aaPredicted RBP4.88□□□□□ -1.63
HMGB1P30-201ENST00000492455 CYP8B1Q9UNU6 501 aa4.88□□□□□ -1.63
HMGB1P30-201ENST00000492455 SUV39H1O43463 412 aa4.87□□□□□ -1.63
HMGB1P30-201ENST00000492455 FBXO24O75426 580 aa4.87□□□□□ -1.63
HMGB1P30-201ENST00000492455 TCF3P15923 654 aa4.87□□□□□ -1.63
HMGB1P30-201ENST00000492455 SRSF3P84103 164 aaKnown RBP4.87□□□□□ -1.63
HMGB1P30-201ENST00000492455 EFEMP1Q12805 493 aa4.87□□□□□ -1.63
HMGB1P30-201ENST00000492455 TIGD5Q53EQ6 642 aa4.87□□□□□ -1.63
HMGB1P30-201ENST00000492455 OLFML2BQ68BL8 750 aa4.87□□□□□ -1.63
HMGB1P30-201ENST00000492455 ANKS4BQ8N8V4 417 aa4.87□□□□□ -1.63
HMGB1P30-201ENST00000492455 TMEM87AQ8NBN3 555 aa4.87□□□□□ -1.63
HMGB1P30-201ENST00000492455 PLPPR2Q96GM1 343 aa4.87□□□□□ -1.63
HMGB1P30-201ENST00000492455 BDH2Q9BUT1 245 aa4.87□□□□□ -1.63
HMGB1P30-201ENST00000492455 SP110Q9HB58 689 aa4.87□□□□□ -1.63
HMGB1P30-201ENST00000492455 KCNH3Q9ULD8 1083 aa4.87□□□□□ -1.63
HMGB1P30-201ENST00000492455 MYRFQ9Y2G1 1151 aa4.87□□□□□ -1.63
HMGB1P30-201ENST00000492455 HRKO00198 91 aa4.86□□□□□ -1.63
HMGB1P30-201ENST00000492455 ENC1O14682 589 aa4.86□□□□□ -1.63
HMGB1P30-201ENST00000492455 SCAMP3O14828 347 aaKnown RBP4.86□□□□□ -1.63
HMGB1P30-201ENST00000492455 ST13P50502 369 aaKnown RBP4.86□□□□□ -1.63
HMGB1P30-201ENST00000492455 RAD51AP2Q09MP3 1159 aa4.86□□□□□ -1.63
HMGB1P30-201ENST00000492455 INPP5AQ14642 412 aa4.86□□□□□ -1.63
HMGB1P30-201ENST00000492455 TAF1CQ15572 869 aaPredicted RBP4.86□□□□□ -1.63
HMGB1P30-201ENST00000492455 GAB4Q2WGN9 574 aa4.86□□□□□ -1.63
HMGB1P30-201ENST00000492455 ADGRF1Q5T601 910 aa4.86□□□□□ -1.63
HMGB1P30-201ENST00000492455 FRMD5Q7Z6J6 570 aa4.86□□□□□ -1.63
HMGB1P30-201ENST00000492455 PANK1Q8TE04 598 aa4.86□□□□□ -1.63
HMGB1P30-201ENST00000492455 LUC7LQ9NQ29 371 aaKnown RBP4.86□□□□□ -1.63
HMGB1P30-201ENST00000492455 PPM1HQ9ULR3 514 aa4.86□□□□□ -1.63
HMGB1P30-201ENST00000492455 SNCAIPQ9Y6H5 919 aa4.86□□□□□ -1.63
HMGB1P30-201ENST00000492455 WASH4PA8MWX3 477 aa4.85□□□□□ -1.63
HMGB1P30-201ENST00000492455 PAGE1O75459 146 aa4.85□□□□□ -1.63
HMGB1P30-201ENST00000492455 CELA3AP09093 270 aa4.85□□□□□ -1.63
HMGB1P30-201ENST00000492455 RASIP1Q5U651 963 aa4.85□□□□□ -1.63
HMGB1P30-201ENST00000492455 C9orf131Q5VYM1 1079 aa4.85□□□□□ -1.63
HMGB1P30-201ENST00000492455 ERMP1Q7Z2K6 904 aa4.85□□□□□ -1.63
HMGB1P30-201ENST00000492455 DUSP15Q9H1R2 295 aaPredicted RBP4.85□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms