RNA–Protein interactions for RNA: ENST00000492449.5

VPS8-225, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 1 (best)

Gene VPS8, Length 2,980 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-225ENST00000492449 COL15A1P39059 1388 aa10.86□□□□□ -0.67
VPS8-225ENST00000492449 IBSPP21815 317 aaPredicted RBP10.86□□□□□ -0.67
VPS8-225ENST00000492449 EXOSC10Q01780 885 aaKnown RBP10.86□□□□□ -0.67
VPS8-225ENST00000492449 GUCY1A3Q02108 690 aa10.86□□□□□ -0.67
VPS8-225ENST00000492449 LAMB3Q13751 1172 aa10.86□□□□□ -0.67
VPS8-225ENST00000492449 MORC3Q14149 939 aa10.86□□□□□ -0.67
VPS8-225ENST00000492449 SPRED3Q2MJR0 410 aa10.86□□□□□ -0.67
VPS8-225ENST00000492449 SHC4Q6S5L8 630 aa10.86□□□□□ -0.67
VPS8-225ENST00000492449 DHX32Q7L7V1 743 aaKnown RBP10.86□□□□□ -0.67
VPS8-225ENST00000492449 SPATA21Q7Z572 469 aa10.86□□□□□ -0.67
VPS8-225ENST00000492449 IQCKQ8N0W5 287 aa10.86□□□□□ -0.67
VPS8-225ENST00000492449 MREGQ8N565 214 aa10.86□□□□□ -0.67
VPS8-225ENST00000492449 ZIM3Q96PE6 472 aa10.86□□□□□ -0.67
VPS8-225ENST00000492449 CTAGE1Q96RT6 745 aa10.86□□□□□ -0.67
VPS8-225ENST00000492449 SEC62Q99442 399 aaKnown RBP10.86□□□□□ -0.67
VPS8-225ENST00000492449 LMCD1Q9NZU5 365 aa10.86□□□□□ -0.67
VPS8-225ENST00000492449 SIGLEC1Q9BZZ2 1709 aa10.85□□□□□ -0.67
VPS8-225ENST00000492449 SPDYE3A6NKU9 549 aa10.85□□□□□ -0.67
VPS8-225ENST00000492449 HMGB1P1B2RPK0 211 aaPredicted RBP10.85□□□□□ -0.67
VPS8-225ENST00000492449 PPIP5K2O43314 1243 aa10.85□□□□□ -0.67
VPS8-225ENST00000492449 ZMYND10O75800 440 aa10.85□□□□□ -0.67
VPS8-225ENST00000492449 CDKL5O76039 1030 aa10.85□□□□□ -0.67
VPS8-225ENST00000492449 LUC7L3O95232 432 aaKnown RBP10.85□□□□□ -0.67
VPS8-225ENST00000492449 GYPCP04921 128 aa10.85□□□□□ -0.67
VPS8-225ENST00000492449 ATP1A1P05023 1023 aaKnown RBP10.85□□□□□ -0.67
VPS8-225ENST00000492449 GSTA1P08263 222 aa10.85□□□□□ -0.67
VPS8-225ENST00000492449 HDGFP51858 240 aaKnown RBP10.85□□□□□ -0.67
VPS8-225ENST00000492449 CCNG1P51959 295 aa10.85□□□□□ -0.67
VPS8-225ENST00000492449 SLC5A4Q9NY91 659 aa10.85□□□□□ -0.67
VPS8-225ENST00000492449 MAN1B1Q9UKM7 699 aa10.85□□□□□ -0.67
VPS8-225ENST00000492449 ABLIM1O14639 778 aa10.85□□□□□ -0.67
VPS8-225ENST00000492449 OPLAHO14841 1288 aa10.85□□□□□ -0.67
VPS8-225ENST00000492449 ANP32DO95626 131 aa10.85□□□□□ -0.67
VPS8-225ENST00000492449 ATP1A2P50993 1020 aa10.85□□□□□ -0.67
VPS8-225ENST00000492449 CCT2P78371 535 aaKnown RBP10.85□□□□□ -0.67
VPS8-225ENST00000492449 MYO1EQ12965 1108 aa10.85□□□□□ -0.67
VPS8-225ENST00000492449 TRIM14Q14142 442 aa10.85□□□□□ -0.67
VPS8-225ENST00000492449 CCDC181Q5TID7 509 aa10.85□□□□□ -0.67
VPS8-225ENST00000492449 CCDC102BQ68D86 513 aa10.85□□□□□ -0.67
VPS8-225ENST00000492449 GALNT15Q8N3T1 639 aa10.85□□□□□ -0.67
VPS8-225ENST00000492449 CCT6BQ92526 530 aa10.85□□□□□ -0.67
VPS8-225ENST00000492449 MED15Q96RN5 788 aa10.85□□□□□ -0.67
VPS8-225ENST00000492449 ABHD10Q9NUJ1 306 aa10.85□□□□□ -0.67
VPS8-225ENST00000492449 TEX33O43247 280 aa10.84□□□□□ -0.67
VPS8-225ENST00000492449 SSBP05455 408 aaKnown RBP eCLIP10.84□□□□□ -0.67
VPS8-225ENST00000492449 CASP14P31944 242 aa10.84□□□□□ -0.67
VPS8-225ENST00000492449 PLCD1P51178 756 aa10.84□□□□□ -0.67
VPS8-225ENST00000492449 FOSBP53539 338 aa10.84□□□□□ -0.67
VPS8-225ENST00000492449 ITGB3BPQ13352 177 aaPredicted RBP10.84□□□□□ -0.67
VPS8-225ENST00000492449 BYSLQ13895 437 aaKnown RBP10.84□□□□□ -0.67
VPS8-225ENST00000492449 NFXL1Q6ZNB6 911 aa10.84□□□□□ -0.67
VPS8-225ENST00000492449 TEX9Q8N6V9 391 aa10.84□□□□□ -0.67
VPS8-225ENST00000492449 ATL2Q8NHH9 583 aa10.84□□□□□ -0.67
VPS8-225ENST00000492449 SUDS3Q9H7L9 328 aaPredicted RBP10.84□□□□□ -0.67
VPS8-225ENST00000492449 PAPOLBQ9NRJ5 636 aaKnown RBP10.84□□□□□ -0.67
VPS8-225ENST00000492449 NOP53Q9NZM5 478 aaKnown RBP10.84□□□□□ -0.67
VPS8-225ENST00000492449 KIDINS220Q9ULH0 1771 aa10.84□□□□□ -0.67
VPS8-225ENST00000492449 NALCNQ8IZF0 1738 aa10.84□□□□□ -0.67
VPS8-225ENST00000492449 FMN2Q9NZ56 1722 aa10.84□□□□□ -0.67
VPS8-225ENST00000492449 ECM29Q5VYK3 1845 aa10.84□□□□□ -0.67
VPS8-225ENST00000492449 GMNCA6NCL1 334 aa10.84□□□□□ -0.67
VPS8-225ENST00000492449 CYP21A2P08686 494 aa10.84□□□□□ -0.67
VPS8-225ENST00000492449 SEC24CP53992 1094 aa10.84□□□□□ -0.67
VPS8-225ENST00000492449 GUCY1B3Q02153 619 aa10.84□□□□□ -0.67
VPS8-225ENST00000492449 CDKAL1Q5VV42 579 aa10.84□□□□□ -0.67
VPS8-225ENST00000492449 SH2D3CQ8N5H7 860 aa10.84□□□□□ -0.67
VPS8-225ENST00000492449 JAKMIP2Q96AA8 810 aa10.84□□□□□ -0.67
VPS8-225ENST00000492449 HDAC6Q9UBN7 1215 aa10.84□□□□□ -0.67
VPS8-225ENST00000492449 REXO2Q9Y3B8 237 aaKnown RBP10.84□□□□□ -0.67
VPS8-225ENST00000492449 PCDHGA4Q9Y5G9 962 aa10.84□□□□□ -0.67
VPS8-225ENST00000492449 TRAPPC3O43617 180 aa10.83□□□□□ -0.68
VPS8-225ENST00000492449 SASH1O94885 1247 aa10.83□□□□□ -0.68
VPS8-225ENST00000492449 PYGLP06737 847 aa10.83□□□□□ -0.68
VPS8-225ENST00000492449 PAEPP09466 180 aa10.83□□□□□ -0.68
VPS8-225ENST00000492449 PDIA3P30101 505 aaKnown RBP10.83□□□□□ -0.68
VPS8-225ENST00000492449 FXR1P51114 621 aaKnown RBP eCLIP10.83□□□□□ -0.68
VPS8-225ENST00000492449 MSL1Q68DK7 614 aa10.83□□□□□ -0.68
VPS8-225ENST00000492449 FNBP4Q8N3X1 1017 aaPredicted RBP10.83□□□□□ -0.68
VPS8-225ENST00000492449 ARFGAP2Q8N6H7 521 aa10.83□□□□□ -0.68
VPS8-225ENST00000492449 FAM81AQ8TBF8 368 aa10.83□□□□□ -0.68
VPS8-225ENST00000492449 MKL1Q969V6 931 aa10.83□□□□□ -0.68
VPS8-225ENST00000492449 ATP6V1G3Q96LB4 118 aa10.83□□□□□ -0.68
VPS8-225ENST00000492449 CDK19Q9BWU1 502 aa10.83□□□□□ -0.68
VPS8-225ENST00000492449 SAMSN1Q9NSI8 373 aaKnown RBP10.83□□□□□ -0.68
VPS8-225ENST00000492449 PARP4Q9UKK3 1724 aaKnown RBP10.83□□□□□ -0.68
VPS8-225ENST00000492449 BCL9LQ86UU0 1499 aa10.83□□□□□ -0.68
VPS8-225ENST00000492449 ZNF233A6NK53 670 aa10.83□□□□□ -0.68
VPS8-225ENST00000492449 B4DLN1 442 aa10.83□□□□□ -0.68
VPS8-225ENST00000492449 E7EVH7 732 aa10.83□□□□□ -0.68
VPS8-225ENST00000492449 PDE2AO00408 941 aaPredicted RBP10.83□□□□□ -0.68
VPS8-225ENST00000492449 PTPAQ15257 358 aa10.83□□□□□ -0.68
VPS8-225ENST00000492449 LONRF3Q496Y0 759 aa10.83□□□□□ -0.68
VPS8-225ENST00000492449 SEC16BQ96JE7 1060 aa10.83□□□□□ -0.68
VPS8-225ENST00000492449 FSD1Q9BTV5 496 aa10.83□□□□□ -0.68
VPS8-225ENST00000492449 NDST4Q9H3R1 872 aa10.83□□□□□ -0.68
VPS8-225ENST00000492449 EIF4ENIF1Q9NRA8 985 aaKnown RBP10.83□□□□□ -0.68
VPS8-225ENST00000492449 ANAPC4Q9UJX5 808 aa10.83□□□□□ -0.68
VPS8-225ENST00000492449 TMEM131LA2VDJ0 1609 aa10.83□□□□□ -0.68
VPS8-225ENST00000492449 CFAP73A6NFT4 308 aa10.83□□□□□ -0.68
VPS8-225ENST00000492449 KIAA0753Q2KHM9 967 aa10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms