RNA–Protein interactions for RNA: ENST00000491922.1

CCDC6-202, Transcript of coiled-coil domain containing 6, humanhuman

TSL 2

Gene CCDC6, Length 2,642 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC6-202ENST00000491922 MAB21L3Q8N8X9 362 aa7.22□□□□□ -1.25
CCDC6-202ENST00000491922 ARL8AQ96BM9 186 aa7.22□□□□□ -1.25
CCDC6-202ENST00000491922 RSRC1Q96IZ7 334 aaKnown RBP7.22□□□□□ -1.25
CCDC6-202ENST00000491922 SH3GL3Q99963 347 aa7.22□□□□□ -1.25
CCDC6-202ENST00000491922 SPATS2LQ9NUQ6 558 aaKnown RBP7.22□□□□□ -1.25
CCDC6-202ENST00000491922 SPEF2Q9C093 1822 aa7.21□□□□□ -1.25
CCDC6-202ENST00000491922 ANKRD33BA6NCL7 494 aa7.21□□□□□ -1.25
CCDC6-202ENST00000491922 KRT86O43790 486 aa7.21□□□□□ -1.25
CCDC6-202ENST00000491922 SRGAP2O75044 1071 aa7.21□□□□□ -1.25
CCDC6-202ENST00000491922 DDX58O95786 925 aaKnown RBP7.21□□□□□ -1.25
CCDC6-202ENST00000491922 FAM107AO95990 144 aa7.21□□□□□ -1.25
CCDC6-202ENST00000491922 GBP2P32456 591 aaPredicted RBP7.21□□□□□ -1.25
CCDC6-202ENST00000491922 KRT83P78385 493 aa7.21□□□□□ -1.25
CCDC6-202ENST00000491922 SPAG1Q07617 926 aa7.21□□□□□ -1.25
CCDC6-202ENST00000491922 CUL4BQ13620 913 aa7.21□□□□□ -1.25
CCDC6-202ENST00000491922 TRIM29Q14134 588 aa7.21□□□□□ -1.25
CCDC6-202ENST00000491922 CCDC122Q5T0U0 273 aa7.21□□□□□ -1.25
CCDC6-202ENST00000491922 KIAA1328Q86T90 577 aa7.21□□□□□ -1.25
CCDC6-202ENST00000491922 FUKQ8N0W3 1084 aa7.21□□□□□ -1.25
CCDC6-202ENST00000491922 FNBP4Q8N3X1 1017 aaPredicted RBP7.21□□□□□ -1.25
CCDC6-202ENST00000491922 ZNF579Q8NAF0 562 aaKnown RBP7.21□□□□□ -1.25
CCDC6-202ENST00000491922 C1orf131Q8NDD1 294 aaKnown RBP7.21□□□□□ -1.25
CCDC6-202ENST00000491922 MYCBPAPQ8TBZ2 947 aa7.21□□□□□ -1.25
CCDC6-202ENST00000491922 HOOK2Q96ED9 719 aa7.21□□□□□ -1.25
CCDC6-202ENST00000491922 RRP36Q96EU6 259 aaKnown RBP7.21□□□□□ -1.25
CCDC6-202ENST00000491922 CCT8L2Q96SF2 557 aa7.21□□□□□ -1.25
CCDC6-202ENST00000491922 LIMA1Q9UHB6 759 aaKnown RBP7.21□□□□□ -1.25
CCDC6-202ENST00000491922 REXO2Q9Y3B8 237 aaKnown RBP7.21□□□□□ -1.25
CCDC6-202ENST00000491922 PARP4Q9UKK3 1724 aaKnown RBP7.21□□□□□ -1.26
CCDC6-202ENST00000491922 NWD2Q9ULI1 1742 aa7.21□□□□□ -1.26
CCDC6-202ENST00000491922 KRT9P35527 623 aa7.21□□□□□ -1.26
CCDC6-202ENST00000491922 SSR1P43307 286 aaKnown RBP7.21□□□□□ -1.26
CCDC6-202ENST00000491922 PIP4K2AP48426 406 aaPredicted RBP7.21□□□□□ -1.26
CCDC6-202ENST00000491922 ATP1A2P50993 1020 aa7.21□□□□□ -1.26
CCDC6-202ENST00000491922 ADCY2Q08462 1091 aa7.21□□□□□ -1.26
CCDC6-202ENST00000491922 C2orf54Q08AI8 447 aa7.21□□□□□ -1.26
CCDC6-202ENST00000491922 TFCP2Q12800 502 aa7.21□□□□□ -1.26
CCDC6-202ENST00000491922 IFT88Q13099 833 aa7.21□□□□□ -1.26
CCDC6-202ENST00000491922 NAA25Q14CX7 972 aa7.21□□□□□ -1.26
CCDC6-202ENST00000491922 NBPF9Q3BBW0 867 aa7.21□□□□□ -1.26
CCDC6-202ENST00000491922 AP1ARQ63HQ0 302 aa7.21□□□□□ -1.26
CCDC6-202ENST00000491922 ZNF483Q8TF39 744 aaPredicted RBP7.21□□□□□ -1.26
CCDC6-202ENST00000491922 RNPC3Q96LT9 517 aaKnown RBP7.21□□□□□ -1.26
CCDC6-202ENST00000491922 GPHNQ9NQX3 736 aaPredicted RBP7.21□□□□□ -1.26
CCDC6-202ENST00000491922 TRIM10Q9UDY6 481 aa7.21□□□□□ -1.26
CCDC6-202ENST00000491922 EPB41L3Q9Y2J2 1087 aaPredicted RBP7.21□□□□□ -1.26
CCDC6-202ENST00000491922 NDUFB9Q9Y6M9 179 aa7.21□□□□□ -1.26
CCDC6-202ENST00000491922 A0A0G2JLW4 131 aa7.2□□□□□ -1.26
CCDC6-202ENST00000491922 UBAP1LF5GYI3 381 aa7.2□□□□□ -1.26
CCDC6-202ENST00000491922 N4BP3O15049 544 aa7.2□□□□□ -1.26
CCDC6-202ENST00000491922 ACTN4O43707 911 aaKnown RBP7.2□□□□□ -1.26
CCDC6-202ENST00000491922 PDHBP11177 359 aa7.2□□□□□ -1.26
CCDC6-202ENST00000491922 NR1D1P20393 614 aa7.2□□□□□ -1.26
CCDC6-202ENST00000491922 PTPREP23469 700 aa7.2□□□□□ -1.26
CCDC6-202ENST00000491922 CCNHP51946 323 aaPredicted RBP7.2□□□□□ -1.26
CCDC6-202ENST00000491922 IMMTQ16891 758 aaKnown RBP7.2□□□□□ -1.26
CCDC6-202ENST00000491922 TMEM132AQ24JP5 1023 aa7.2□□□□□ -1.26
CCDC6-202ENST00000491922 FAM228AQ86W67 206 aa7.2□□□□□ -1.26
CCDC6-202ENST00000491922 CD302Q8IX05 232 aa7.2□□□□□ -1.26
CCDC6-202ENST00000491922 MB21D2Q8IYB1 491 aaPredicted RBP7.2□□□□□ -1.26
CCDC6-202ENST00000491922 KLHDC4Q8TBB5 520 aa7.2□□□□□ -1.26
CCDC6-202ENST00000491922 P3H4Q92791 437 aa7.2□□□□□ -1.26
CCDC6-202ENST00000491922 AIDAQ96BJ3 306 aa7.2□□□□□ -1.26
CCDC6-202ENST00000491922 ZIM3Q96PE6 472 aa7.2□□□□□ -1.26
CCDC6-202ENST00000491922 DBNDD2Q9BQY9 259 aa7.2□□□□□ -1.26
CCDC6-202ENST00000491922 PAG1Q9NWQ8 432 aa7.2□□□□□ -1.26
CCDC6-202ENST00000491922 FBXO2Q9UK22 296 aaPredicted RBP7.2□□□□□ -1.26
CCDC6-202ENST00000491922 TPX2Q9ULW0 747 aaKnown RBP7.2□□□□□ -1.26
CCDC6-202ENST00000491922 IQSEC3Q9UPP2 1182 aaPredicted RBP7.2□□□□□ -1.26
CCDC6-202ENST00000491922 MAST3O60307 1309 aa7.2□□□□□ -1.26
CCDC6-202ENST00000491922 CPDO75976 1380 aa7.2□□□□□ -1.26
CCDC6-202ENST00000491922 METP08581 1390 aa7.2□□□□□ -1.26
CCDC6-202ENST00000491922 MST1RQ04912 1400 aa7.2□□□□□ -1.26
CCDC6-202ENST00000491922 LMO7Q8WWI1 1683 aa7.2□□□□□ -1.26
CCDC6-202ENST00000491922 LRRC10BA6NIK2 292 aa7.2□□□□□ -1.26
CCDC6-202ENST00000491922 PDE2AO00408 941 aaPredicted RBP7.2□□□□□ -1.26
CCDC6-202ENST00000491922 RAPGEF3O95398 923 aa7.2□□□□□ -1.26
CCDC6-202ENST00000491922 MDH1P40925 334 aaKnown RBP7.2□□□□□ -1.26
CCDC6-202ENST00000491922 HERVK_113P62684 666 aa7.2□□□□□ -1.26
CCDC6-202ENST00000491922 HDLBPQ00341 1268 aaKnown RBP7.2□□□□□ -1.26
CCDC6-202ENST00000491922 GUCY1A3Q02108 690 aa7.2□□□□□ -1.26
CCDC6-202ENST00000491922 KRT31Q15323 416 aa7.2□□□□□ -1.26
CCDC6-202ENST00000491922 WASHC4Q2M389 1173 aa7.2□□□□□ -1.26
CCDC6-202ENST00000491922 TSR1Q2NL82 804 aaKnown RBP7.2□□□□□ -1.26
CCDC6-202ENST00000491922 SPECC1Q5M775 1068 aa7.2□□□□□ -1.26
CCDC6-202ENST00000491922 PPP4R3AQ6IN85 833 aa7.2□□□□□ -1.26
CCDC6-202ENST00000491922 KLHL10Q6JEL2 608 aa7.2□□□□□ -1.26
CCDC6-202ENST00000491922 STK11IPQ8N1F8 1099 aa7.2□□□□□ -1.26
CCDC6-202ENST00000491922 TSEN2Q8NCE0 465 aaKnown RBP7.2□□□□□ -1.26
CCDC6-202ENST00000491922 OR8K1Q8NGG5 319 aa7.2□□□□□ -1.26
CCDC6-202ENST00000491922 NCOA7Q8NI08 942 aa7.2□□□□□ -1.26
CCDC6-202ENST00000491922 SCLT1Q96NL6 688 aa7.2□□□□□ -1.26
CCDC6-202ENST00000491922 BCL9LQ86UU0 1499 aa7.2□□□□□ -1.26
CCDC6-202ENST00000491922 ANKRD18BA2A2Z9 1011 aa7.19□□□□□ -1.26
CCDC6-202ENST00000491922 HMGB1P1B2RPK0 211 aaPredicted RBP7.19□□□□□ -1.26
CCDC6-202ENST00000491922 SH2B2O14492 632 aaPredicted RBP7.19□□□□□ -1.26
CCDC6-202ENST00000491922 RNF113AO15541 343 aaKnown RBP7.19□□□□□ -1.26
CCDC6-202ENST00000491922 IDEP14735 1019 aa7.19□□□□□ -1.26
CCDC6-202ENST00000491922 GCKP35557 465 aa7.19□□□□□ -1.26
CCDC6-202ENST00000491922 CCT6AP40227 531 aaKnown RBP7.19□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms