RNA–Protein interactions for RNA: ENST00000491860.1

NUP50-217, Transcript of nucleoporin 50, humanhuman

TSL 2

Gene NUP50, Length 493 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-217ENST00000491860 SLC5A4Q9NY91 659 aa10.52□□□□□ -0.73
NUP50-217ENST00000491860 STAP2Q9UGK3 403 aa10.52□□□□□ -0.73
NUP50-217ENST00000491860 STXBP5LQ9Y2K9 1186 aa10.52□□□□□ -0.73
NUP50-217ENST00000491860 BAZ2AQ9UIF9 1905 aaKnown RBP10.51□□□□□ -0.73
NUP50-217ENST00000491860 ERC2O15083 957 aa10.51□□□□□ -0.73
NUP50-217ENST00000491860 HOXC6P09630 235 aa10.51□□□□□ -0.73
NUP50-217ENST00000491860 GNAT2P19087 354 aa10.51□□□□□ -0.73
NUP50-217ENST00000491860 Q3C1V9 767 aa10.51□□□□□ -0.73
NUP50-217ENST00000491860 LRIT3Q3SXY7 679 aa10.51□□□□□ -0.73
NUP50-217ENST00000491860 C16orf86Q6ZW13 317 aa10.51□□□□□ -0.73
NUP50-217ENST00000491860 SHCBP1Q8NEM2 672 aa10.51□□□□□ -0.73
NUP50-217ENST00000491860 ACER1Q8TDN7 264 aa10.51□□□□□ -0.73
NUP50-217ENST00000491860 EDC3Q96F86 508 aaKnown RBP10.51□□□□□ -0.73
NUP50-217ENST00000491860 NBPF3Q9H094 633 aa10.51□□□□□ -0.73
NUP50-217ENST00000491860 DCTPP1Q9H773 170 aa10.51□□□□□ -0.73
NUP50-217ENST00000491860 KANSL2Q9H9L4 492 aa10.51□□□□□ -0.73
NUP50-217ENST00000491860 OGDHLQ9ULD0 1010 aa10.51□□□□□ -0.73
NUP50-217ENST00000491860 SLC4A4Q9Y6R1 1079 aa10.51□□□□□ -0.73
NUP50-217ENST00000491860 UNC80Q8N2C7 3258 aa10.5□□□□□ -0.73
NUP50-217ENST00000491860 SPDYE16A6NNV3 312 aaPredicted RBP10.5□□□□□ -0.73
NUP50-217ENST00000491860 WDR46O15213 610 aaKnown RBP10.5□□□□□ -0.73
NUP50-217ENST00000491860 PTPREP23469 700 aa10.5□□□□□ -0.73
NUP50-217ENST00000491860 GUCY1A2P33402 732 aa10.5□□□□□ -0.73
NUP50-217ENST00000491860 COPB2P35606 906 aa10.5□□□□□ -0.73
NUP50-217ENST00000491860 ICA1Q05084 483 aa10.5□□□□□ -0.73
NUP50-217ENST00000491860 SHROOM1Q2M3G4 852 aaPredicted RBP10.5□□□□□ -0.73
NUP50-217ENST00000491860 WDR78Q5VTH9 848 aa10.5□□□□□ -0.73
NUP50-217ENST00000491860 KBTBD3Q8NAB2 608 aa10.5□□□□□ -0.73
NUP50-217ENST00000491860 PAWRQ96IZ0 340 aaKnown RBP10.5□□□□□ -0.73
NUP50-217ENST00000491860 TANGO6Q9C0B7 1094 aa10.5□□□□□ -0.73
NUP50-217ENST00000491860 BCL11AQ9H165 835 aa10.5□□□□□ -0.73
NUP50-217ENST00000491860 PORCNQ9H237 461 aa10.5□□□□□ -0.73
NUP50-217ENST00000491860 MROH8Q9H579 483 aa10.5□□□□□ -0.73
NUP50-217ENST00000491860 GOPCQ9HD26 462 aa10.5□□□□□ -0.73
NUP50-217ENST00000491860 ZBTB47Q9UFB7 747 aaPredicted RBP10.5□□□□□ -0.73
NUP50-217ENST00000491860 TMX2Q9Y320 296 aa10.5□□□□□ -0.73
NUP50-217ENST00000491860 TTC41PQ6P2S7 1318 aa10.5□□□□□ -0.73
NUP50-217ENST00000491860 ZNF236Q9UL36 1845 aa10.49□□□□□ -0.73
NUP50-217ENST00000491860 USP17L12C9JPN9 530 aa10.49□□□□□ -0.73
NUP50-217ENST00000491860 USP17L21D6R901 530 aa10.49□□□□□ -0.73
NUP50-217ENST00000491860 CNMDO75829 334 aa10.49□□□□□ -0.73
NUP50-217ENST00000491860 SLC25A27O95847 323 aa10.49□□□□□ -0.73
NUP50-217ENST00000491860 CDK8P49336 464 aa10.49□□□□□ -0.73
NUP50-217ENST00000491860 ATP2B2Q01814 1243 aa10.49□□□□□ -0.73
NUP50-217ENST00000491860 CACNB2Q08289 660 aaPredicted RBP10.49□□□□□ -0.73
NUP50-217ENST00000491860 GRB14Q14449 540 aa10.49□□□□□ -0.73
NUP50-217ENST00000491860 SBK1Q52WX2 424 aa10.49□□□□□ -0.73
NUP50-217ENST00000491860 ABRAQ8N0Z2 381 aa10.49□□□□□ -0.73
NUP50-217ENST00000491860 DEFB123Q8N688 67 aa10.49□□□□□ -0.73
NUP50-217ENST00000491860 APPBP2Q92624 585 aa10.49□□□□□ -0.73
NUP50-217ENST00000491860 C11orf49Q9H6J7 331 aa10.49□□□□□ -0.73
NUP50-217ENST00000491860 VCPKMTQ9H867 229 aa10.49□□□□□ -0.73
NUP50-217ENST00000491860 MTMR10Q9NXD2 777 aa10.49□□□□□ -0.73
NUP50-217ENST00000491860 A0A0G2JMZ2 1700 aa10.48□□□□□ -0.73
NUP50-217ENST00000491860 A0A1W2PRG0 241 aa10.48□□□□□ -0.73
NUP50-217ENST00000491860 PRKAB2O43741 272 aa10.48□□□□□ -0.73
NUP50-217ENST00000491860 FLOT1O75955 427 aa10.48□□□□□ -0.73
NUP50-217ENST00000491860 DSG3P32926 999 aa10.48□□□□□ -0.73
NUP50-217ENST00000491860 PPP4R3BQ5MIZ7 849 aa10.48□□□□□ -0.73
NUP50-217ENST00000491860 C20orf194Q5TEA3 1177 aa10.48□□□□□ -0.73
NUP50-217ENST00000491860 OLFML2BQ68BL8 750 aa10.48□□□□□ -0.73
NUP50-217ENST00000491860 DPP9Q86TI2 863 aa10.48□□□□□ -0.73
NUP50-217ENST00000491860 NACAP1Q9BZK3 213 aa10.48□□□□□ -0.73
NUP50-217ENST00000491860 SPATC1LQ9H0A9 340 aa10.48□□□□□ -0.73
NUP50-217ENST00000491860 MKNK2Q9HBH9 465 aa10.48□□□□□ -0.73
NUP50-217ENST00000491860 BTBD7Q9P203 1132 aa10.48□□□□□ -0.73
NUP50-217ENST00000491860 SYNPO2Q9UMS6 1093 aa10.48□□□□□ -0.73
NUP50-217ENST00000491860 RNF113AO15541 343 aaKnown RBP10.47□□□□□ -0.73
NUP50-217ENST00000491860 SMARCA5O60264 1052 aaPredicted RBP10.47□□□□□ -0.73
NUP50-217ENST00000491860 SLC3A2P08195 630 aaKnown RBP10.47□□□□□ -0.73
NUP50-217ENST00000491860 CYP2D6P10635 497 aa10.47□□□□□ -0.73
NUP50-217ENST00000491860 AKR1B1P15121 316 aa10.47□□□□□ -0.73
NUP50-217ENST00000491860 TRIM32Q13049 653 aa10.47□□□□□ -0.73
NUP50-217ENST00000491860 AAMPQ13685 434 aa10.47□□□□□ -0.73
NUP50-217ENST00000491860 CTR9Q6PD62 1173 aa10.47□□□□□ -0.73
NUP50-217ENST00000491860 TICAM2Q86XR7 235 aa10.47□□□□□ -0.73
NUP50-217ENST00000491860 TDHQ8IZJ6 230 aa10.47□□□□□ -0.73
NUP50-217ENST00000491860 DIS3LQ8TF46 1054 aaKnown RBP10.47□□□□□ -0.73
NUP50-217ENST00000491860 DYNLL2Q96FJ2 89 aa10.47□□□□□ -0.73
NUP50-217ENST00000491860 STRBPQ96SI9 672 aaKnown RBP10.47□□□□□ -0.73
NUP50-217ENST00000491860 PUS7LQ9H0K6 701 aaKnown RBP10.47□□□□□ -0.73
NUP50-217ENST00000491860 NRBP1Q9UHY1 535 aa10.47□□□□□ -0.73
NUP50-217ENST00000491860 ROBO3Q96MS0 1386 aa10.47□□□□□ -0.73
NUP50-217ENST00000491860 FCER1AP12319 257 aa10.46□□□□□ -0.73
NUP50-217ENST00000491860 EEF2P13639 858 aaKnown RBP10.46□□□□□ -0.73
NUP50-217ENST00000491860 TDO2P48775 406 aa10.46□□□□□ -0.73
NUP50-217ENST00000491860 POTEEQ6S8J3 1075 aa10.46□□□□□ -0.73
NUP50-217ENST00000491860 C7orf61Q8IZ16 206 aa10.46□□□□□ -0.73
NUP50-217ENST00000491860 SLC44A5Q8NCS7 719 aa10.46□□□□□ -0.73
NUP50-217ENST00000491860 ARRDC4Q8NCT1 418 aa10.46□□□□□ -0.73
NUP50-217ENST00000491860 MOV10L1Q9BXT6 1211 aaKnown RBP10.46□□□□□ -0.73
NUP50-217ENST00000491860 RLFQ13129 1914 aa10.46□□□□□ -0.74
NUP50-217ENST00000491860 PARP14Q460N5 1801 aa10.45□□□□□ -0.74
NUP50-217ENST00000491860 GPAA1O43292 621 aa10.45□□□□□ -0.74
NUP50-217ENST00000491860 PEX10O60683 326 aa10.45□□□□□ -0.74
NUP50-217ENST00000491860 COL6A1P12109 1028 aa10.45□□□□□ -0.74
NUP50-217ENST00000491860 ERCC3P19447 782 aa10.45□□□□□ -0.74
NUP50-217ENST00000491860 ADORA2AP29274 412 aa10.45□□□□□ -0.74
NUP50-217ENST00000491860 CCND3P30281 292 aaPredicted RBP10.45□□□□□ -0.74
NUP50-217ENST00000491860 MAGEA10P43363 369 aaPredicted RBP10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms