RNA–Protein interactions for RNA: ENST00000491142.1

HPS4-215, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 2

Gene HPS4, Length 486 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-215ENST00000491142 ZNF697Q5TEC3 545 aa10.34□□□□□ -0.75
HPS4-215ENST00000491142 CASC1Q6TDU7 716 aa10.34□□□□□ -0.75
HPS4-215ENST00000491142 PLEKHH3Q7Z736 793 aa10.34□□□□□ -0.75
HPS4-215ENST00000491142 HSCBQ8IWL3 235 aa10.34□□□□□ -0.75
HPS4-215ENST00000491142 CCAR1Q8IX12 1150 aaKnown RBP10.34□□□□□ -0.75
HPS4-215ENST00000491142 TEX11Q8IYF3 940 aa10.34□□□□□ -0.75
HPS4-215ENST00000491142 SH3RF3Q8TEJ3 882 aaPredicted RBP10.34□□□□□ -0.75
HPS4-215ENST00000491142 KIF2CQ99661 725 aa10.34□□□□□ -0.75
HPS4-215ENST00000491142 DNAJC18Q9H819 358 aa10.34□□□□□ -0.75
HPS4-215ENST00000491142 SCUBE2Q9NQ36 999 aa10.34□□□□□ -0.75
HPS4-215ENST00000491142 FLRT1Q9NZU1 646 aa10.34□□□□□ -0.75
HPS4-215ENST00000491142 RAI14Q9P0K7 980 aa10.34□□□□□ -0.75
HPS4-215ENST00000491142 PI4KBQ9UBF8 816 aa10.34□□□□□ -0.75
HPS4-215ENST00000491142 HERC5Q9UII4 1024 aaKnown RBP10.34□□□□□ -0.75
HPS4-215ENST00000491142 EXOC6BQ9Y2D4 811 aa10.34□□□□□ -0.75
HPS4-215ENST00000491142 NDUFB9Q9Y6M9 179 aa10.34□□□□□ -0.75
HPS4-215ENST00000491142 ATAD5Q96QE3 1844 aa10.34□□□□□ -0.75
HPS4-215ENST00000491142 C19orf81C9J6K1 198 aa10.33□□□□□ -0.76
HPS4-215ENST00000491142 USP17L10C9JJH3 530 aa10.33□□□□□ -0.76
HPS4-215ENST00000491142 GDF11O95390 407 aa10.33□□□□□ -0.76
HPS4-215ENST00000491142 MAP4K4O95819 1239 aaPredicted RBP10.33□□□□□ -0.76
HPS4-215ENST00000491142 ASNSP08243 561 aa10.33□□□□□ -0.76
HPS4-215ENST00000491142 GSTO1P78417 241 aa10.33□□□□□ -0.76
HPS4-215ENST00000491142 SHHQ15465 462 aa10.33□□□□□ -0.76
HPS4-215ENST00000491142 HSP90AB4PQ58FF6 505 aa10.33□□□□□ -0.76
HPS4-215ENST00000491142 SPATA5Q8NB90 893 aa10.33□□□□□ -0.76
HPS4-215ENST00000491142 EDC3Q96F86 508 aaKnown RBP10.33□□□□□ -0.76
HPS4-215ENST00000491142 NEUROD6Q96NK8 337 aa10.33□□□□□ -0.76
HPS4-215ENST00000491142 APBA2Q99767 749 aa10.33□□□□□ -0.76
HPS4-215ENST00000491142 SEMA6BQ9H3T3 888 aa10.33□□□□□ -0.76
HPS4-215ENST00000491142 PRDM6Q9NQX0 595 aa10.33□□□□□ -0.76
HPS4-215ENST00000491142 EMILIN3Q9NT22 766 aa10.33□□□□□ -0.76
HPS4-215ENST00000491142 CNMDO75829 334 aa10.32□□□□□ -0.76
HPS4-215ENST00000491142 MX1P20591 662 aa10.32□□□□□ -0.76
HPS4-215ENST00000491142 CNGA1P29973 690 aa10.32□□□□□ -0.76
HPS4-215ENST00000491142 RTP1P59025 263 aa10.32□□□□□ -0.76
HPS4-215ENST00000491142 MAP2K5Q13163 448 aa10.32□□□□□ -0.76
HPS4-215ENST00000491142 C9orf50Q5SZB4 431 aa10.32□□□□□ -0.76
HPS4-215ENST00000491142 MAFAQ8NHW3 353 aaPredicted RBP10.32□□□□□ -0.76
HPS4-215ENST00000491142 TGFBRAP1Q8WUH2 860 aa10.32□□□□□ -0.76
HPS4-215ENST00000491142 MYLIPQ8WY64 445 aa10.32□□□□□ -0.76
HPS4-215ENST00000491142 OCEL1Q9H607 264 aa10.32□□□□□ -0.76
HPS4-215ENST00000491142 CWC22Q9HCG8 908 aaKnown RBP10.32□□□□□ -0.76
HPS4-215ENST00000491142 DDX20Q9UHI6 824 aaKnown RBP10.32□□□□□ -0.76
HPS4-215ENST00000491142 AKAP2Q9Y2D5 859 aa10.32□□□□□ -0.76
HPS4-215ENST00000491142 APBB1O00213 710 aa10.31□□□□□ -0.76
HPS4-215ENST00000491142 CYP2C19P33261 490 aa10.31□□□□□ -0.76
HPS4-215ENST00000491142 MFSD14CQ5VZR4 134 aa10.31□□□□□ -0.76
HPS4-215ENST00000491142 METTL16Q86W50 562 aaKnown RBP10.31□□□□□ -0.76
HPS4-215ENST00000491142 FOXP4Q8IVH2 680 aaPredicted RBP10.31□□□□□ -0.76
HPS4-215ENST00000491142 MAPKAPK5Q8IW41 473 aa10.31□□□□□ -0.76
HPS4-215ENST00000491142 TRPV1Q8NER1 839 aa10.31□□□□□ -0.76
HPS4-215ENST00000491142 LPAR1Q92633 364 aa10.31□□□□□ -0.76
HPS4-215ENST00000491142 KIF1BPQ96EK5 621 aa10.31□□□□□ -0.76
HPS4-215ENST00000491142 USP26Q9BXU7 913 aa10.31□□□□□ -0.76
HPS4-215ENST00000491142 DHX36Q9H2U1 1008 aaKnown RBP10.31□□□□□ -0.76
HPS4-215ENST00000491142 TTYH1Q9H313 450 aaPredicted RBP10.31□□□□□ -0.76
HPS4-215ENST00000491142 AATFQ9NY61 560 aaKnown RBP eCLIP10.31□□□□□ -0.76
HPS4-215ENST00000491142 LRP2BPQ9P2M1 347 aa10.31□□□□□ -0.76
HPS4-215ENST00000491142 PRKAG2Q9UGJ0 569 aa10.31□□□□□ -0.76
HPS4-215ENST00000491142 PALD1Q9ULE6 856 aa10.31□□□□□ -0.76
HPS4-215ENST00000491142 ZBTB21Q9ULJ3 1066 aa10.31□□□□□ -0.76
HPS4-215ENST00000491142 ATP11BQ9Y2G3 1177 aa10.31□□□□□ -0.76
HPS4-215ENST00000491142 SIPA1L1O43166 1804 aa10.3□□□□□ -0.76
HPS4-215ENST00000491142 DNM1LO00429 736 aa10.3□□□□□ -0.76
HPS4-215ENST00000491142 ERC2O15083 957 aa10.3□□□□□ -0.76
HPS4-215ENST00000491142 SRGAP3O43295 1099 aa10.3□□□□□ -0.76
HPS4-215ENST00000491142 EPB41L2O43491 1005 aaKnown RBP10.3□□□□□ -0.76
HPS4-215ENST00000491142 REC8O95072 547 aa10.3□□□□□ -0.76
HPS4-215ENST00000491142 PTPREP23469 700 aa10.3□□□□□ -0.76
HPS4-215ENST00000491142 ARID4AP29374 1257 aaPredicted RBP10.3□□□□□ -0.76
HPS4-215ENST00000491142 MCAMP43121 646 aa10.3□□□□□ -0.76
HPS4-215ENST00000491142 ATP2B2Q01814 1243 aa10.3□□□□□ -0.76
HPS4-215ENST00000491142 RABEP1Q15276 862 aa10.3□□□□□ -0.76
HPS4-215ENST00000491142 ZYXQ15942 572 aaKnown RBP10.3□□□□□ -0.76
HPS4-215ENST00000491142 GJC2Q5T442 439 aaPredicted RBP10.3□□□□□ -0.76
HPS4-215ENST00000491142 GORABQ5T7V8 394 aa10.3□□□□□ -0.76
HPS4-215ENST00000491142 WDR78Q5VTH9 848 aa10.3□□□□□ -0.76
HPS4-215ENST00000491142 USP17L2Q6R6M4 530 aa10.3□□□□□ -0.76
HPS4-215ENST00000491142 ADGRA1Q86SQ6 560 aa10.3□□□□□ -0.76
HPS4-215ENST00000491142 CRACR2BQ8N4Y2 399 aaPredicted RBP10.3□□□□□ -0.76
HPS4-215ENST00000491142 NPLOC4Q8TAT6 608 aa10.3□□□□□ -0.76
HPS4-215ENST00000491142 GTF3C2Q8WUA4 911 aaPredicted RBP10.3□□□□□ -0.76
HPS4-215ENST00000491142 BADQ92934 168 aa10.3□□□□□ -0.76
HPS4-215ENST00000491142 CHMP5Q9NZZ3 219 aa10.3□□□□□ -0.76
HPS4-215ENST00000491142 SAP30BPQ9UHR5 308 aaKnown RBP10.3□□□□□ -0.76
HPS4-215ENST00000491142 RABGAP1Q9Y3P9 1069 aa10.3□□□□□ -0.76
HPS4-215ENST00000491142 MAST2Q6P0Q8 1798 aa10.29□□□□□ -0.76
HPS4-215ENST00000491142 SLC15A5A6NIM6 579 aa10.29□□□□□ -0.76
HPS4-215ENST00000491142 SURF6O75683 361 aaKnown RBP10.29□□□□□ -0.76
HPS4-215ENST00000491142 BAG3O95817 575 aa10.29□□□□□ -0.76
HPS4-215ENST00000491142 DDIT3P35638 169 aa10.29□□□□□ -0.76
HPS4-215ENST00000491142 DEKP35659 375 aaKnown RBP10.29□□□□□ -0.76
HPS4-215ENST00000491142 PPP4CP60510 307 aa10.29□□□□□ -0.76
HPS4-215ENST00000491142 ANO1Q5XXA6 986 aa10.29□□□□□ -0.76
HPS4-215ENST00000491142 NAA16Q6N069 864 aaPredicted RBP10.29□□□□□ -0.76
HPS4-215ENST00000491142 SLC39A5Q6ZMH5 540 aa10.29□□□□□ -0.76
HPS4-215ENST00000491142 RHPN1Q8TCX5 695 aa10.29□□□□□ -0.76
HPS4-215ENST00000491142 NOL10Q9BSC4 688 aaKnown RBP10.29□□□□□ -0.76
HPS4-215ENST00000491142 TRIM34Q9BYJ4 488 aa10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms