RNA–Protein interactions for RNA: ENST00000490993.5

NPHP3-208, Transcript of nephrocystin 3, humanhuman

TSL 5

Gene NPHP3, Length 5,197 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-208ENST00000490993 USO1O60763 962 aaKnown RBP8.29□□□□□ -1.08
NPHP3-208ENST00000490993 CDC27P30260 824 aa8.29□□□□□ -1.08
NPHP3-208ENST00000490993 PAK1Q13153 545 aa8.29□□□□□ -1.08
NPHP3-208ENST00000490993 RBM26Q5T8P6 1007 aaKnown RBP8.29□□□□□ -1.08
NPHP3-208ENST00000490993 CC2D2BQ6DHV5 1058 aa8.29□□□□□ -1.08
NPHP3-208ENST00000490993 CACNA2D4Q7Z3S7 1137 aa8.29□□□□□ -1.08
NPHP3-208ENST00000490993 FEZ1Q99689 392 aa8.29□□□□□ -1.08
NPHP3-208ENST00000490993 FTOQ9C0B1 505 aaKnown RBP eCLIP8.29□□□□□ -1.08
NPHP3-208ENST00000490993 CUEDC2Q9H467 287 aa8.29□□□□□ -1.08
NPHP3-208ENST00000490993 MROH7-TTC4A0A0A0MT08 1334 aa8.29□□□□□ -1.08
NPHP3-208ENST00000490993 POTEB2H3BUK9 544 aa8.29□□□□□ -1.08
NPHP3-208ENST00000490993 URI1O94763 535 aaPredicted RBP8.29□□□□□ -1.08
NPHP3-208ENST00000490993 CCDC175P0C221 793 aa8.29□□□□□ -1.08
NPHP3-208ENST00000490993 ERCC5P28715 1186 aaPredicted RBP8.29□□□□□ -1.08
NPHP3-208ENST00000490993 FAM182BQ5T319 152 aa8.29□□□□□ -1.08
NPHP3-208ENST00000490993 FMR1NBQ8N0W7 255 aaPredicted RBP8.29□□□□□ -1.08
NPHP3-208ENST00000490993 CLIC6Q96NY7 704 aa8.29□□□□□ -1.08
NPHP3-208ENST00000490993 GSDMAQ96QA5 445 aa8.29□□□□□ -1.08
NPHP3-208ENST00000490993 CRAMP1Q96RY5 1269 aa8.29□□□□□ -1.08
NPHP3-208ENST00000490993 PDCL3Q9H2J4 239 aa8.29□□□□□ -1.08
NPHP3-208ENST00000490993 AK9Q5TCS8 1911 aa8.28□□□□□ -1.08
NPHP3-208ENST00000490993 hCG_1642624A0A1W2PR95 340 aa8.28□□□□□ -1.08
NPHP3-208ENST00000490993 AKR1B15C9JRZ8 316 aaPredicted RBP8.28□□□□□ -1.08
NPHP3-208ENST00000490993 GTPBP6O43824 516 aaPredicted RBP8.28□□□□□ -1.08
NPHP3-208ENST00000490993 HOXA7P31268 230 aaPredicted RBP8.28□□□□□ -1.08
NPHP3-208ENST00000490993 VGLL2Q8N8G2 317 aa8.28□□□□□ -1.08
NPHP3-208ENST00000490993 ENAHQ8N8S7 591 aaPredicted RBP8.28□□□□□ -1.08
NPHP3-208ENST00000490993 CD209Q9NNX6 404 aa8.28□□□□□ -1.08
NPHP3-208ENST00000490993 NFE2L3Q9Y4A8 694 aa8.28□□□□□ -1.08
NPHP3-208ENST00000490993 CTDNEP1O95476 244 aa8.28□□□□□ -1.08
NPHP3-208ENST00000490993 MYL1P05976 194 aa8.28□□□□□ -1.08
NPHP3-208ENST00000490993 TUBB4BP68371 445 aa8.28□□□□□ -1.08
NPHP3-208ENST00000490993 CCDC40Q4G0X9 1142 aa8.28□□□□□ -1.08
NPHP3-208ENST00000490993 AK8Q96MA6 479 aa8.28□□□□□ -1.08
NPHP3-208ENST00000490993 USP17L8P0C7I0 530 aa8.28□□□□□ -1.08
NPHP3-208ENST00000490993 U2AF2P26368 475 aaKnown RBP eCLIP8.28□□□□□ -1.08
NPHP3-208ENST00000490993 PRDX5P30044 214 aa8.28□□□□□ -1.08
NPHP3-208ENST00000490993 GPATCH4Q5T3I0 446 aaKnown RBP8.28□□□□□ -1.08
NPHP3-208ENST00000490993 ARL6IP4Q66PJ3 421 aaKnown RBP8.28□□□□□ -1.08
NPHP3-208ENST00000490993 SP8Q8IXZ3 490 aa8.28□□□□□ -1.08
NPHP3-208ENST00000490993 MASTLQ96GX5 879 aa8.28□□□□□ -1.08
NPHP3-208ENST00000490993 BAG1Q99933 345 aaPredicted RBP8.28□□□□□ -1.08
NPHP3-208ENST00000490993 NAA15Q9BXJ9 866 aaKnown RBP8.28□□□□□ -1.08
NPHP3-208ENST00000490993 CSRNP2Q9H175 543 aa8.28□□□□□ -1.08
NPHP3-208ENST00000490993 EPB41L4AQ9HCS5 686 aaPredicted RBP8.28□□□□□ -1.08
NPHP3-208ENST00000490993 CTNND2Q9UQB3 1225 aa8.28□□□□□ -1.08
NPHP3-208ENST00000490993 TBCAO75347 108 aaKnown RBP8.28□□□□□ -1.08
NPHP3-208ENST00000490993 PTPREP23469 700 aa8.28□□□□□ -1.08
NPHP3-208ENST00000490993 CYLC1P35663 651 aaPredicted RBP8.28□□□□□ -1.08
NPHP3-208ENST00000490993 SLC1A4P43007 532 aa8.28□□□□□ -1.08
NPHP3-208ENST00000490993 PTGDRQ13258 359 aa8.28□□□□□ -1.08
NPHP3-208ENST00000490993 HSP90B2PQ58FF3 399 aa8.28□□□□□ -1.08
NPHP3-208ENST00000490993 NEK8Q86SG6 692 aa8.28□□□□□ -1.08
NPHP3-208ENST00000490993 XPO4Q9C0E2 1151 aaKnown RBP8.28□□□□□ -1.08
NPHP3-208ENST00000490993 GBP3Q9H0R5 595 aa8.28□□□□□ -1.08
NPHP3-208ENST00000490993 DHX36Q9H2U1 1008 aaKnown RBP8.28□□□□□ -1.08
NPHP3-208ENST00000490993 MCM3P25205 808 aa8.27□□□□□ -1.09
NPHP3-208ENST00000490993 CALCRLQ16602 461 aa8.27□□□□□ -1.09
NPHP3-208ENST00000490993 C11orf57Q6ZUT1 292 aaPredicted RBP8.27□□□□□ -1.09
NPHP3-208ENST00000490993 CABP7Q86V35 215 aa8.27□□□□□ -1.09
NPHP3-208ENST00000490993 JDP2Q8WYK2 163 aa8.27□□□□□ -1.09
NPHP3-208ENST00000490993 IQCDQ96DY2 449 aa8.27□□□□□ -1.09
NPHP3-208ENST00000490993 AIFM3Q96NN9 605 aa8.27□□□□□ -1.09
NPHP3-208ENST00000490993 SLC4A9Q96Q91 983 aa8.27□□□□□ -1.09
NPHP3-208ENST00000490993 SCN11AQ9UI33 1791 aa8.27□□□□□ -1.09
NPHP3-208ENST00000490993 CYP2D7A0A087X1C5 515 aa8.27□□□□□ -1.09
NPHP3-208ENST00000490993 POLD1P28340 1107 aa8.27□□□□□ -1.09
NPHP3-208ENST00000490993 STX17P56962 302 aa8.27□□□□□ -1.09
NPHP3-208ENST00000490993 PFKFB3Q16875 520 aaPredicted RBP8.27□□□□□ -1.09
NPHP3-208ENST00000490993 KIF4BQ2VIQ3 1234 aa8.27□□□□□ -1.09
NPHP3-208ENST00000490993 HAUS3Q68CZ6 603 aa8.27□□□□□ -1.09
NPHP3-208ENST00000490993 SH3RF3Q8TEJ3 882 aaPredicted RBP8.27□□□□□ -1.09
NPHP3-208ENST00000490993 SYMPKQ92797 1274 aaKnown RBP8.27□□□□□ -1.09
NPHP3-208ENST00000490993 LRWD1Q9UFC0 647 aa8.27□□□□□ -1.09
NPHP3-208ENST00000490993 RGPD2P0DJD1 1756 aa8.27□□□□□ -1.09
NPHP3-208ENST00000490993 TCRBV5S4A2TA0A5A2 114 aa8.27□□□□□ -1.09
NPHP3-208ENST00000490993 TTLL1O95922 423 aa8.27□□□□□ -1.09
NPHP3-208ENST00000490993 OR52Z1P0C646 297 aa8.27□□□□□ -1.09
NPHP3-208ENST00000490993 SLFN14P0C7P3 912 aa8.27□□□□□ -1.09
NPHP3-208ENST00000490993 TRIM21P19474 475 aaKnown RBP8.27□□□□□ -1.09
NPHP3-208ENST00000490993 SYCP1Q15431 976 aa8.27□□□□□ -1.09
NPHP3-208ENST00000490993 GRIPAP1Q4V328 841 aa8.27□□□□□ -1.09
NPHP3-208ENST00000490993 JAKMIP3Q5VZ66 844 aa8.27□□□□□ -1.09
NPHP3-208ENST00000490993 VPS36Q86VN1 386 aa8.27□□□□□ -1.09
NPHP3-208ENST00000490993 CERKQ8TCT0 537 aa8.27□□□□□ -1.09
NPHP3-208ENST00000490993 GOLPH3LQ9H4A5 285 aa8.27□□□□□ -1.09
NPHP3-208ENST00000490993 EIF4ENIF1Q9NRA8 985 aaKnown RBP8.27□□□□□ -1.09
NPHP3-208ENST00000490993 HPS5Q9UPZ3 1129 aa8.27□□□□□ -1.09
NPHP3-208ENST00000490993 KCPQ6ZWJ8 1503 aa8.27□□□□□ -1.09
NPHP3-208ENST00000490993 RIC1Q4ADV7 1423 aa8.27□□□□□ -1.09
NPHP3-208ENST00000490993 ARHGAP6O43182 974 aa8.27□□□□□ -1.09
NPHP3-208ENST00000490993 FDPSP14324 419 aaKnown RBP8.27□□□□□ -1.09
NPHP3-208ENST00000490993 CDK8P49336 464 aa8.27□□□□□ -1.09
NPHP3-208ENST00000490993 GNG11P61952 73 aa8.27□□□□□ -1.09
NPHP3-208ENST00000490993 KRT83P78385 493 aa8.27□□□□□ -1.09
NPHP3-208ENST00000490993 UBXN1Q04323 297 aa8.27□□□□□ -1.09
NPHP3-208ENST00000490993 LRRC8AQ8IWT6 810 aa8.27□□□□□ -1.09
NPHP3-208ENST00000490993 CCDC65Q8IXS2 484 aa8.27□□□□□ -1.09
NPHP3-208ENST00000490993 CCDC51Q96ER9 411 aa8.27□□□□□ -1.09
NPHP3-208ENST00000490993 PCDHA5Q9Y5H7 936 aa8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms