RNA–Protein interactions for RNA: ENST00000490441.1

DUBR-204, DPPA2 upstream binding RNA, humanhuman

TSL 1 (best) BASIC

Gene DUBR, Length 1,149 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DUBR-204ENST00000490441 NBPF3Q9H094 633 aa13.55□□□□□ -0.24
DUBR-204ENST00000490441 SPDYE16A6NNV3 312 aaPredicted RBP13.54□□□□□ -0.24
DUBR-204ENST00000490441 PRKAB2O43741 272 aa13.54□□□□□ -0.24
DUBR-204ENST00000490441 CNMDO75829 334 aa13.54□□□□□ -0.24
DUBR-204ENST00000490441 PRR29P0C7W0 189 aa13.54□□□□□ -0.24
DUBR-204ENST00000490441 MAP2K5Q13163 448 aa13.54□□□□□ -0.24
DUBR-204ENST00000490441 UBE3CQ15386 1083 aa13.54□□□□□ -0.24
DUBR-204ENST00000490441 C20orf194Q5TEA3 1177 aa13.54□□□□□ -0.24
DUBR-204ENST00000490441 MFSD14CQ5VZR4 134 aa13.54□□□□□ -0.24
DUBR-204ENST00000490441 LBX2Q6XYB7 198 aa13.54□□□□□ -0.24
DUBR-204ENST00000490441 SLC44A5Q8NCS7 719 aa13.54□□□□□ -0.24
DUBR-204ENST00000490441 USP6NLQ92738 828 aa13.54□□□□□ -0.24
DUBR-204ENST00000490441 DYNLL2Q96FJ2 89 aa13.54□□□□□ -0.24
DUBR-204ENST00000490441 GPATCH3Q96I76 525 aa13.54□□□□□ -0.24
DUBR-204ENST00000490441 SH2D4AQ9H788 454 aa13.54□□□□□ -0.24
DUBR-204ENST00000490441 ARHGEF10LQ9HCE6 1279 aa13.54□□□□□ -0.24
DUBR-204ENST00000490441 RBM27Q9P2N5 1060 aaKnown RBP13.54□□□□□ -0.24
DUBR-204ENST00000490441 MYH8P13535 1937 aa13.53□□□□□ -0.24
DUBR-204ENST00000490441 SLC15A5A6NIM6 579 aa13.53□□□□□ -0.24
DUBR-204ENST00000490441 SMARCA5O60264 1052 aaPredicted RBP13.53□□□□□ -0.24
DUBR-204ENST00000490441 EVX2Q03828 476 aa13.53□□□□□ -0.24
DUBR-204ENST00000490441 ICA1Q05084 483 aa13.53□□□□□ -0.24
DUBR-204ENST00000490441 CACNB2Q08289 660 aaPredicted RBP13.53□□□□□ -0.24
DUBR-204ENST00000490441 COG2Q14746 738 aa13.53□□□□□ -0.24
DUBR-204ENST00000490441 CCL14Q16627 93 aa13.53□□□□□ -0.24
DUBR-204ENST00000490441 SLFNL1Q499Z3 407 aa13.53□□□□□ -0.24
DUBR-204ENST00000490441 POTEEQ6S8J3 1075 aa13.53□□□□□ -0.24
DUBR-204ENST00000490441 BBXQ8WY36 941 aaPredicted RBP13.53□□□□□ -0.24
DUBR-204ENST00000490441 CCDC17Q96LX7 622 aa13.53□□□□□ -0.24
DUBR-204ENST00000490441 C11orf49Q9H6J7 331 aa13.53□□□□□ -0.24
DUBR-204ENST00000490441 HOXC10Q9NYD6 342 aa13.53□□□□□ -0.24
DUBR-204ENST00000490441 OGDHLQ9ULD0 1010 aa13.53□□□□□ -0.24
DUBR-204ENST00000490441 SLC4A4Q9Y6R1 1079 aa13.53□□□□□ -0.24
DUBR-204ENST00000490441 USP17L12C9JPN9 530 aa13.52□□□□□ -0.25
DUBR-204ENST00000490441 USP17L21D6R901 530 aa13.52□□□□□ -0.25
DUBR-204ENST00000490441 PTPREP23469 700 aa13.52□□□□□ -0.25
DUBR-204ENST00000490441 LPAR1Q92633 364 aa13.52□□□□□ -0.25
DUBR-204ENST00000490441 ECHDC1Q9NTX5 307 aa13.52□□□□□ -0.25
DUBR-204ENST00000490441 BTBD7Q9P203 1132 aa13.52□□□□□ -0.25
DUBR-204ENST00000490441 MYH7P12883 1935 aa13.52□□□□□ -0.25
DUBR-204ENST00000490441 BAZ2AQ9UIF9 1905 aaKnown RBP13.52□□□□□ -0.25
DUBR-204ENST00000490441 CYP2D7A0A087X1C5 515 aa13.51□□□□□ -0.25
DUBR-204ENST00000490441 A0A1W2PRG0 241 aa13.51□□□□□ -0.25
DUBR-204ENST00000490441 FLOT1O75955 427 aa13.51□□□□□ -0.25
DUBR-204ENST00000490441 AKR1B1P15121 316 aa13.51□□□□□ -0.25
DUBR-204ENST00000490441 CCND3P30281 292 aaPredicted RBP13.51□□□□□ -0.25
DUBR-204ENST00000490441 CDK8P49336 464 aa13.51□□□□□ -0.25
DUBR-204ENST00000490441 ATP2B2Q01814 1243 aa13.51□□□□□ -0.25
DUBR-204ENST00000490441 GRB14Q14449 540 aa13.51□□□□□ -0.25
DUBR-204ENST00000490441 C12orf60Q5U649 245 aa13.51□□□□□ -0.25
DUBR-204ENST00000490441 C7orf61Q8IZ16 206 aa13.51□□□□□ -0.25
DUBR-204ENST00000490441 MB21D1Q8N884 522 aa13.51□□□□□ -0.25
DUBR-204ENST00000490441 NUBP1P53384 320 aa13.5□□□□□ -0.25
DUBR-204ENST00000490441 PLS1Q14651 629 aa13.5□□□□□ -0.25
DUBR-204ENST00000490441 C16orf86Q6ZW13 317 aa13.5□□□□□ -0.25
DUBR-204ENST00000490441 DPP9Q86TI2 863 aa13.5□□□□□ -0.25
DUBR-204ENST00000490441 CLEC10AQ8IUN9 316 aa13.5□□□□□ -0.25
DUBR-204ENST00000490441 SPICE1Q8N0Z3 855 aa13.5□□□□□ -0.25
DUBR-204ENST00000490441 SPATC1LQ9H0A9 340 aa13.5□□□□□ -0.25
DUBR-204ENST00000490441 PUS7LQ9H0K6 701 aaKnown RBP13.5□□□□□ -0.25
DUBR-204ENST00000490441 VCPKMTQ9H867 229 aa13.5□□□□□ -0.25
DUBR-204ENST00000490441 ARPP21Q9UBL0 812 aaPredicted RBP13.5□□□□□ -0.25
DUBR-204ENST00000490441 TMX2Q9Y320 296 aa13.5□□□□□ -0.25
DUBR-204ENST00000490441 A0A1W2PPC1 479 aa13.49□□□□□ -0.25
DUBR-204ENST00000490441 WDR46O15213 610 aaKnown RBP13.49□□□□□ -0.25
DUBR-204ENST00000490441 STRNO43815 780 aa13.49□□□□□ -0.25
DUBR-204ENST00000490441 MSCO60682 206 aa13.49□□□□□ -0.25
DUBR-204ENST00000490441 CHGBP05060 677 aa13.49□□□□□ -0.25
DUBR-204ENST00000490441 HOXC6P09630 235 aa13.49□□□□□ -0.25
DUBR-204ENST00000490441 CNGA1P29973 690 aa13.49□□□□□ -0.25
DUBR-204ENST00000490441 MNX1P50219 401 aaPredicted RBP13.49□□□□□ -0.25
DUBR-204ENST00000490441 LRRFIP1Q32MZ4 808 aaKnown RBP13.49□□□□□ -0.25
DUBR-204ENST00000490441 KBTBD3Q8NAB2 608 aa13.49□□□□□ -0.25
DUBR-204ENST00000490441 SHCBP1Q8NEM2 672 aa13.49□□□□□ -0.25
DUBR-204ENST00000490441 MOV10L1Q9BXT6 1211 aaKnown RBP13.49□□□□□ -0.25
DUBR-204ENST00000490441 PRO3102Q9H379 93 aa13.49□□□□□ -0.25
DUBR-204ENST00000490441 DCTPP1Q9H773 170 aa13.49□□□□□ -0.25
DUBR-204ENST00000490441 KANSL2Q9H9L4 492 aa13.49□□□□□ -0.25
DUBR-204ENST00000490441 GOPCQ9HD26 462 aa13.49□□□□□ -0.25
DUBR-204ENST00000490441 SLC5A4Q9NY91 659 aa13.49□□□□□ -0.25
DUBR-204ENST00000490441 ZMYND8Q9ULU4 1186 aaPredicted RBP13.49□□□□□ -0.25
DUBR-204ENST00000490441 RANBP2P49792 3224 aaKnown RBP13.49□□□□□ -0.25
DUBR-204ENST00000490441 ALPK3Q96L96 1907 aa13.49□□□□□ -0.25
DUBR-204ENST00000490441 RAD21O60216 631 aa13.48□□□□□ -0.25
DUBR-204ENST00000490441 ERCC3P19447 782 aa13.48□□□□□ -0.25
DUBR-204ENST00000490441 ADORA2AP29274 412 aa13.48□□□□□ -0.25
DUBR-204ENST00000490441 GSE1Q14687 1217 aa13.48□□□□□ -0.25
DUBR-204ENST00000490441 CTR9Q6PD62 1173 aa13.48□□□□□ -0.25
DUBR-204ENST00000490441 NCAPG2Q86XI2 1143 aa13.48□□□□□ -0.25
DUBR-204ENST00000490441 ATG4CQ96DT6 458 aa13.48□□□□□ -0.25
DUBR-204ENST00000490441 MROH8Q9H579 483 aa13.48□□□□□ -0.25
DUBR-204ENST00000490441 FLRT1Q9NZU1 646 aa13.48□□□□□ -0.25
DUBR-204ENST00000490441 STAP2Q9UGK3 403 aa13.48□□□□□ -0.25
DUBR-204ENST00000490441 ZFYP08048 801 aaPredicted RBP13.47□□□□□ -0.25
DUBR-204ENST00000490441 EEF2P13639 858 aaKnown RBP13.47□□□□□ -0.25
DUBR-204ENST00000490441 CYP2C19P33261 490 aa13.47□□□□□ -0.25
DUBR-204ENST00000490441 KIAA1755Q5JYT7 1200 aa13.47□□□□□ -0.25
DUBR-204ENST00000490441 LHX8Q68G74 356 aa13.47□□□□□ -0.25
DUBR-204ENST00000490441 NPLOC4Q8TAT6 608 aa13.47□□□□□ -0.25
DUBR-204ENST00000490441 APPBP2Q92624 585 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms