RNA–Protein interactions for RNA: ENST00000490193.5

USP39-216, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 5

Gene USP39, Length 1,028 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-216ENST00000490193 GH2P01242 217 aa10.04□□□□□ -0.8
USP39-216ENST00000490193 GNAI2P04899 355 aa10.04□□□□□ -0.8
USP39-216ENST00000490193 USP14P54578 494 aa10.04□□□□□ -0.8
USP39-216ENST00000490193 G3BP1Q13283 466 aaKnown RBP eCLIP10.04□□□□□ -0.8
USP39-216ENST00000490193 GRB14Q14449 540 aa10.04□□□□□ -0.8
USP39-216ENST00000490193 GSE1Q14687 1217 aa10.04□□□□□ -0.8
USP39-216ENST00000490193 CATSPERGQ6ZRH7 1159 aa10.04□□□□□ -0.8
USP39-216ENST00000490193 CERS3Q8IU89 383 aa10.04□□□□□ -0.8
USP39-216ENST00000490193 LBHD1Q9BQE6 289 aaPredicted RBP10.04□□□□□ -0.8
USP39-216ENST00000490193 SENP6Q9GZR1 1112 aaPredicted RBP10.04□□□□□ -0.8
USP39-216ENST00000490193 KIAA1683Q9H0B3 1180 aa10.04□□□□□ -0.8
USP39-216ENST00000490193 EHD4Q9H223 541 aa10.04□□□□□ -0.8
USP39-216ENST00000490193 FLRT1Q9NZU1 646 aa10.04□□□□□ -0.8
USP39-216ENST00000490193 CDH23Q9H251 3354 aa10.03□□□□□ -0.8
USP39-216ENST00000490193 FAM205CA6NFA0 338 aa10.03□□□□□ -0.8
USP39-216ENST00000490193 VCAM1P19320 739 aa10.03□□□□□ -0.8
USP39-216ENST00000490193 TNNI3KQ59H18 835 aa10.03□□□□□ -0.8
USP39-216ENST00000490193 CCDC158Q5M9N0 1113 aa10.03□□□□□ -0.8
USP39-216ENST00000490193 TTC39AQ5SRH9 613 aa10.03□□□□□ -0.8
USP39-216ENST00000490193 TMED8Q6PL24 325 aaPredicted RBP10.03□□□□□ -0.8
USP39-216ENST00000490193 PRDM6Q9NQX0 595 aa10.03□□□□□ -0.8
USP39-216ENST00000490193 SNRKQ9NRH2 765 aa10.03□□□□□ -0.8
USP39-216ENST00000490193 FPGT-TNNI3KV9GXZ4 949 aa10.03□□□□□ -0.8
USP39-216ENST00000490193 PARP14Q460N5 1801 aa10.03□□□□□ -0.8
USP39-216ENST00000490193 NAV1Q8NEY1 1877 aa10.02□□□□□ -0.8
USP39-216ENST00000490193 SPDYE16A6NNV3 312 aaPredicted RBP10.02□□□□□ -0.81
USP39-216ENST00000490193 CYBAP13498 195 aa10.02□□□□□ -0.81
USP39-216ENST00000490193 ZAP70P43403 619 aa10.02□□□□□ -0.81
USP39-216ENST00000490193 RTP1P59025 263 aa10.02□□□□□ -0.81
USP39-216ENST00000490193 ATP2B2Q01814 1243 aa10.02□□□□□ -0.81
USP39-216ENST00000490193 SNX17Q15036 470 aa10.02□□□□□ -0.81
USP39-216ENST00000490193 ZNF697Q5TEC3 545 aa10.02□□□□□ -0.81
USP39-216ENST00000490193 TRPV1Q8NER1 839 aa10.02□□□□□ -0.81
USP39-216ENST00000490193 NPLOC4Q8TAT6 608 aa10.02□□□□□ -0.81
USP39-216ENST00000490193 FEZ1Q99689 392 aa10.02□□□□□ -0.81
USP39-216ENST00000490193 DBNDD2Q9BQY9 259 aa10.02□□□□□ -0.81
USP39-216ENST00000490193 CWC22Q9HCG8 908 aaKnown RBP10.02□□□□□ -0.81
USP39-216ENST00000490193 PIH1D3Q9NQM4 214 aaKnown RBP10.02□□□□□ -0.81
USP39-216ENST00000490193 BTBD7Q9P203 1132 aa10.02□□□□□ -0.81
USP39-216ENST00000490193 PRKAG2Q9UGJ0 569 aa10.02□□□□□ -0.81
USP39-216ENST00000490193 SAP30BPQ9UHR5 308 aaKnown RBP10.02□□□□□ -0.81
USP39-216ENST00000490193 SERPINB13Q9UIV8 391 aa10.02□□□□□ -0.81
USP39-216ENST00000490193 IVNS1ABPQ9Y6Y0 642 aa10.02□□□□□ -0.81
USP39-216ENST00000490193 STRNO43815 780 aa10.01□□□□□ -0.81
USP39-216ENST00000490193 TRIM27P14373 513 aa10.01□□□□□ -0.81
USP39-216ENST00000490193 CYP2C19P33261 490 aa10.01□□□□□ -0.81
USP39-216ENST00000490193 DYNLL1P63167 89 aaKnown RBP10.01□□□□□ -0.81
USP39-216ENST00000490193 ZYXQ15942 572 aaKnown RBP10.01□□□□□ -0.81
USP39-216ENST00000490193 C1orf53Q5VUE5 145 aa10.01□□□□□ -0.81
USP39-216ENST00000490193 OLFML2BQ68BL8 750 aa10.01□□□□□ -0.81
USP39-216ENST00000490193 ARRDC4Q8NCT1 418 aa10.01□□□□□ -0.81
USP39-216ENST00000490193 SSH3Q8TE77 659 aa10.01□□□□□ -0.81
USP39-216ENST00000490193 MYH8P13535 1937 aa10□□□□□ -0.81
USP39-216ENST00000490193 ZNFX1Q9P2E3 1918 aaKnown RBP10□□□□□ -0.81
USP39-216ENST00000490193 IPO8O15397 1037 aaKnown RBP10□□□□□ -0.81
USP39-216ENST00000490193 CYP7A1P22680 504 aa10□□□□□ -0.81
USP39-216ENST00000490193 CNGA1P29973 690 aa10□□□□□ -0.81
USP39-216ENST00000490193 SMAD3P84022 425 aaKnown RBP10□□□□□ -0.81
USP39-216ENST00000490193 RAB3GAP1Q15042 981 aa10□□□□□ -0.81
USP39-216ENST00000490193 SHHQ15465 462 aa10□□□□□ -0.81
USP39-216ENST00000490193 ABCB5Q2M3G0 1257 aa10□□□□□ -0.81
USP39-216ENST00000490193 CERKLQ49MI3 558 aaPredicted RBP10□□□□□ -0.81
USP39-216ENST00000490193 WDR78Q5VTH9 848 aa10□□□□□ -0.81
USP39-216ENST00000490193 SLC39A5Q6ZMH5 540 aa10□□□□□ -0.81
USP39-216ENST00000490193 TTC6Q86TZ1 520 aa10□□□□□ -0.81
USP39-216ENST00000490193 SHCBP1Q8NEM2 672 aa10□□□□□ -0.81
USP39-216ENST00000490193 ACER1Q8TDN7 264 aa10□□□□□ -0.81
USP39-216ENST00000490193 FAM161BQ96MY7 647 aa10□□□□□ -0.81
USP39-216ENST00000490193 CDX2Q99626 313 aaPredicted RBP10□□□□□ -0.81
USP39-216ENST00000490193 SEMA6BQ9H3T3 888 aa10□□□□□ -0.81
USP39-216ENST00000490193 RPAP3Q9H6T3 665 aaPredicted RBP10□□□□□ -0.81
USP39-216ENST00000490193 DBNLQ9UJU6 430 aaKnown RBP10□□□□□ -0.81
USP39-216ENST00000490193 NDUFB9Q9Y6M9 179 aa10□□□□□ -0.81
USP39-216ENST00000490193 TMEM265A0A087WTH1 108 aa9.99□□□□□ -0.81
USP39-216ENST00000490193 KBTBD13C9JR72 458 aa9.99□□□□□ -0.81
USP39-216ENST00000490193 SEPT4O43236 478 aa9.99□□□□□ -0.81
USP39-216ENST00000490193 ADORA2AP29274 412 aa9.99□□□□□ -0.81
USP39-216ENST00000490193 GUCY1A2P33402 732 aa9.99□□□□□ -0.81
USP39-216ENST00000490193 SHMT1P34896 483 aa9.99□□□□□ -0.81
USP39-216ENST00000490193 USP5P45974 858 aa9.99□□□□□ -0.81
USP39-216ENST00000490193 GABPAQ06546 454 aa9.99□□□□□ -0.81
USP39-216ENST00000490193 C9orf50Q5SZB4 431 aa9.99□□□□□ -0.81
USP39-216ENST00000490193 GJC2Q5T442 439 aaPredicted RBP9.99□□□□□ -0.81
USP39-216ENST00000490193 ABRAQ8N0Z2 381 aa9.99□□□□□ -0.81
USP39-216ENST00000490193 MAFAQ8NHW3 353 aaPredicted RBP9.99□□□□□ -0.81
USP39-216ENST00000490193 MOV10L1Q9BXT6 1211 aaKnown RBP9.99□□□□□ -0.81
USP39-216ENST00000490193 CABP5Q9NP86 173 aa9.99□□□□□ -0.81
USP39-216ENST00000490193 HOXC10Q9NYD6 342 aa9.99□□□□□ -0.81
USP39-216ENST00000490193 ATP11BQ9Y2G3 1177 aa9.99□□□□□ -0.81
USP39-216ENST00000490193 NOP58Q9Y2X3 529 aaKnown RBP9.99□□□□□ -0.81
USP39-216ENST00000490193 PLXNA1Q9UIW2 1896 aa9.99□□□□□ -0.81
USP39-216ENST00000490193 MUC3AQ02505 3323 aa9.99□□□□□ -0.81
USP39-216ENST00000490193 COL11A1P12107 1806 aaPredicted RBP9.98□□□□□ -0.81
USP39-216ENST00000490193 IDH1O75874 414 aaKnown RBP9.98□□□□□ -0.81
USP39-216ENST00000490193 ATP8B2P98198 1209 aa9.98□□□□□ -0.81
USP39-216ENST00000490193 COG2Q14746 738 aa9.98□□□□□ -0.81
USP39-216ENST00000490193 DPP9Q86TI2 863 aa9.98□□□□□ -0.81
USP39-216ENST00000490193 MB21D1Q8N884 522 aa9.98□□□□□ -0.81
USP39-216ENST00000490193 MIGA1Q8NAN2 632 aa9.98□□□□□ -0.81
USP39-216ENST00000490193 RIOK1Q9BRS2 568 aaKnown RBP9.98□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms