RNA–Protein interactions for RNA: ENST00000490112.1

UBP1-211, Transcript of upstream binding protein 1, humanhuman

TSL 5

Gene UBP1, Length 633 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBP1-211ENST00000490112 MYH1P12882 1939 aa12.98□□□□□ -0.33
UBP1-211ENST00000490112 MYO5AQ9Y4I1 1855 aaKnown RBP12.98□□□□□ -0.33
UBP1-211ENST00000490112 PLXNB2O15031 1838 aa12.98□□□□□ -0.33
UBP1-211ENST00000490112 MS4A1P11836 297 aa12.98□□□□□ -0.33
UBP1-211ENST00000490112 ARSIQ5FYB1 569 aa12.98□□□□□ -0.33
UBP1-211ENST00000490112 MORN1Q5T089 497 aa12.98□□□□□ -0.33
UBP1-211ENST00000490112 GPR142Q7Z601 462 aa12.98□□□□□ -0.33
UBP1-211ENST00000490112 MIGA1Q8NAN2 632 aa12.98□□□□□ -0.33
UBP1-211ENST00000490112 DIS3LQ8TF46 1054 aaKnown RBP12.98□□□□□ -0.33
UBP1-211ENST00000490112 USP6NLQ92738 828 aa12.98□□□□□ -0.33
UBP1-211ENST00000490112 PAGR1Q9BTK6 254 aa12.98□□□□□ -0.33
UBP1-211ENST00000490112 KIAA1683Q9H0B3 1180 aa12.98□□□□□ -0.33
UBP1-211ENST00000490112 STAP2Q9UGK3 403 aa12.98□□□□□ -0.33
UBP1-211ENST00000490112 HNRNPUQ00839 825 aaKnown RBP eCLIP12.97□□□□□ -0.33
UBP1-211ENST00000490112 TRIM32Q13049 653 aa12.97□□□□□ -0.33
UBP1-211ENST00000490112 RAB3GAP1Q15042 981 aa12.97□□□□□ -0.33
UBP1-211ENST00000490112 ABCB5Q2M3G0 1257 aa12.97□□□□□ -0.33
UBP1-211ENST00000490112 CEP85Q6P2H3 762 aa12.97□□□□□ -0.33
UBP1-211ENST00000490112 CATSPERGQ6ZRH7 1159 aa12.97□□□□□ -0.33
UBP1-211ENST00000490112 C7orf61Q8IZ16 206 aa12.97□□□□□ -0.33
UBP1-211ENST00000490112 RNF25Q96BH1 459 aaPredicted RBP12.97□□□□□ -0.33
UBP1-211ENST00000490112 APBA2Q99767 749 aa12.97□□□□□ -0.33
UBP1-211ENST00000490112 TLR7Q9NYK1 1049 aaKnown RBP12.97□□□□□ -0.33
UBP1-211ENST00000490112 COL6A3P12111 3177 aa12.96□□□□□ -0.33
UBP1-211ENST00000490112 A0A0C4DFX4 3053 aa12.96□□□□□ -0.33
UBP1-211ENST00000490112 CACNB2Q08289 660 aaPredicted RBP12.96□□□□□ -0.33
UBP1-211ENST00000490112 Q3C1V9 767 aa12.96□□□□□ -0.33
UBP1-211ENST00000490112 LBX2Q6XYB7 198 aa12.96□□□□□ -0.33
UBP1-211ENST00000490112 AACSQ86V21 672 aa12.96□□□□□ -0.33
UBP1-211ENST00000490112 EDC3Q96F86 508 aaKnown RBP12.96□□□□□ -0.33
UBP1-211ENST00000490112 GDF15Q99988 308 aa12.96□□□□□ -0.33
UBP1-211ENST00000490112 PORCNQ9H237 461 aa12.96□□□□□ -0.33
UBP1-211ENST00000490112 IVNS1ABPQ9Y6Y0 642 aa12.96□□□□□ -0.33
UBP1-211ENST00000490112 MAGEB6P1A0A0J9YX57 407 aa12.95□□□□□ -0.34
UBP1-211ENST00000490112 SLC15A5A6NIM6 579 aa12.95□□□□□ -0.34
UBP1-211ENST00000490112 POLR3DP05423 398 aaPredicted RBP12.95□□□□□ -0.34
UBP1-211ENST00000490112 RLBP1P12271 317 aa12.95□□□□□ -0.34
UBP1-211ENST00000490112 MAP2K5Q13163 448 aa12.95□□□□□ -0.34
UBP1-211ENST00000490112 SHROOM1Q2M3G4 852 aaPredicted RBP12.95□□□□□ -0.34
UBP1-211ENST00000490112 MFSD14CQ5VZR4 134 aa12.95□□□□□ -0.34
UBP1-211ENST00000490112 CRNKL1Q9BZJ0 848 aaKnown RBP12.95□□□□□ -0.34
UBP1-211ENST00000490112 DDX60LQ5H9U9 1706 aaKnown RBP12.95□□□□□ -0.34
UBP1-211ENST00000490112 ALPK3Q96L96 1907 aa12.95□□□□□ -0.34
UBP1-211ENST00000490112 MSCO60682 206 aa12.94□□□□□ -0.34
UBP1-211ENST00000490112 HMMRO75330 724 aa12.94□□□□□ -0.34
UBP1-211ENST00000490112 VCAM1P19320 739 aa12.94□□□□□ -0.34
UBP1-211ENST00000490112 SHMT1P34896 483 aa12.94□□□□□ -0.34
UBP1-211ENST00000490112 ZYXQ15942 572 aaKnown RBP12.94□□□□□ -0.34
UBP1-211ENST00000490112 SLC9C2Q5TAH2 1124 aa12.94□□□□□ -0.34
UBP1-211ENST00000490112 CLASRPQ8N2M8 674 aaKnown RBP12.94□□□□□ -0.34
UBP1-211ENST00000490112 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.94□□□□□ -0.34
UBP1-211ENST00000490112 RIOK1Q9BRS2 568 aaKnown RBP12.94□□□□□ -0.34
UBP1-211ENST00000490112 CHMP4BQ9H444 224 aaKnown RBP12.94□□□□□ -0.34
UBP1-211ENST00000490112 ANTXR1Q9H6X2 564 aa12.94□□□□□ -0.34
UBP1-211ENST00000490112 HOXC10Q9NYD6 342 aa12.94□□□□□ -0.34
UBP1-211ENST00000490112 EXOC6BQ9Y2D4 811 aa12.94□□□□□ -0.34
UBP1-211ENST00000490112 STRNO43815 780 aa12.93□□□□□ -0.34
UBP1-211ENST00000490112 PEX10O60683 326 aa12.93□□□□□ -0.34
UBP1-211ENST00000490112 CNMDO75829 334 aa12.93□□□□□ -0.34
UBP1-211ENST00000490112 HOXC6P09630 235 aa12.93□□□□□ -0.34
UBP1-211ENST00000490112 IFIT2P09913 472 aaKnown RBP12.93□□□□□ -0.34
UBP1-211ENST00000490112 COL6A1P12109 1028 aa12.93□□□□□ -0.34
UBP1-211ENST00000490112 PTPREP23469 700 aa12.93□□□□□ -0.34
UBP1-211ENST00000490112 PLCD1P51178 756 aa12.93□□□□□ -0.34
UBP1-211ENST00000490112 ATP2B2Q01814 1243 aa12.93□□□□□ -0.34
UBP1-211ENST00000490112 LRIT3Q3SXY7 679 aa12.93□□□□□ -0.34
UBP1-211ENST00000490112 WDR78Q5VTH9 848 aa12.93□□□□□ -0.34
UBP1-211ENST00000490112 RPAP2Q8IXW5 612 aaPredicted RBP12.93□□□□□ -0.34
UBP1-211ENST00000490112 RHPN1Q8TCX5 695 aa12.93□□□□□ -0.34
UBP1-211ENST00000490112 KIF1BPQ96EK5 621 aa12.93□□□□□ -0.34
UBP1-211ENST00000490112 MCM9Q9NXL9 1143 aa12.93□□□□□ -0.34
UBP1-211ENST00000490112 SWAP70Q9UH65 585 aa12.93□□□□□ -0.34
UBP1-211ENST00000490112 ZMYND8Q9ULU4 1186 aaPredicted RBP12.93□□□□□ -0.34
UBP1-211ENST00000490112 NDUFB9Q9Y6M9 179 aa12.93□□□□□ -0.34
UBP1-211ENST00000490112 LAMA2P24043 3122 aaKnown RBP12.92□□□□□ -0.34
UBP1-211ENST00000490112 PDE6AP16499 860 aa12.92□□□□□ -0.34
UBP1-211ENST00000490112 CCND3P30281 292 aaPredicted RBP12.92□□□□□ -0.34
UBP1-211ENST00000490112 MAGEA10P43363 369 aaPredicted RBP12.92□□□□□ -0.34
UBP1-211ENST00000490112 GABPAQ06546 454 aa12.92□□□□□ -0.34
UBP1-211ENST00000490112 GRB14Q14449 540 aa12.92□□□□□ -0.34
UBP1-211ENST00000490112 COG2Q14746 738 aa12.92□□□□□ -0.34
UBP1-211ENST00000490112 CCL14Q16627 93 aa12.92□□□□□ -0.34
UBP1-211ENST00000490112 POTEEQ6S8J3 1075 aa12.92□□□□□ -0.34
UBP1-211ENST00000490112 TDHQ8IZJ6 230 aa12.92□□□□□ -0.34
UBP1-211ENST00000490112 MB21D1Q8N884 522 aa12.92□□□□□ -0.34
UBP1-211ENST00000490112 ACER1Q8TDN7 264 aa12.92□□□□□ -0.34
UBP1-211ENST00000490112 RPAP3Q9H6T3 665 aaPredicted RBP12.92□□□□□ -0.34
UBP1-211ENST00000490112 SH2D4AQ9H788 454 aa12.92□□□□□ -0.34
UBP1-211ENST00000490112 SLC5A4Q9NY91 659 aa12.92□□□□□ -0.34
UBP1-211ENST00000490112 PFASO15067 1338 aa12.91□□□□□ -0.34
UBP1-211ENST00000490112 SPDYE16A6NNV3 312 aaPredicted RBP12.91□□□□□ -0.34
UBP1-211ENST00000490112 MPHOSPH10O00566 681 aaKnown RBP12.91□□□□□ -0.34
UBP1-211ENST00000490112 RAB11FIP3O75154 756 aa12.91□□□□□ -0.34
UBP1-211ENST00000490112 TMEM179Q6ZVK1 233 aa12.91□□□□□ -0.34
UBP1-211ENST00000490112 AMOTL1Q8IY63 956 aa12.91□□□□□ -0.34
UBP1-211ENST00000490112 LPAR1Q92633 364 aa12.91□□□□□ -0.34
UBP1-211ENST00000490112 UBE2OQ9C0C9 1292 aaKnown RBP12.91□□□□□ -0.34
UBP1-211ENST00000490112 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.91□□□□□ -0.34
UBP1-211ENST00000490112 IL1RAPL2Q9NP60 686 aa12.91□□□□□ -0.34
UBP1-211ENST00000490112 ATP8A2Q9NTI2 1148 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms